RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 PICALMQ13492 652 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 TMEM132AQ24JP5 1023 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 TMEM67Q5HYA8 995 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 IGDCC4Q8TDY8 1250 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 ESR2Q92731 530 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 DYNLL2Q96FJ2 89 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 ZNF274Q96GC6 653 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 ZKSCAN3Q9BRR0 538 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 GPBP1L1Q9HC44 474 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 SERPINA10Q9UK55 444 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 BRPF3Q9ULD4 1205 aa11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 NAP1L2Q9ULW6 460 aaPredicted RBP11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 ANGEL1Q9UNK9 670 aaKnown RBP11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.67□□□□□ -0.54
SOX2-OT-244ENST00000627738 LTBP3Q9NS15 1303 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 KLF18A0A0U1RQI7 1052 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 ORC4O43929 436 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 RANBP6O60518 1105 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 DTNBO60941 627 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 WDHD1O75717 1129 aaPredicted RBP11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 GJB2P29033 226 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 PDIA3P30101 505 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 PLCD1P51178 756 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 NUCB2P80303 420 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 CXCL9Q07325 125 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 PDE4BQ07343 736 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 SCRN1Q12765 414 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 RAB3GAP1Q15042 981 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 GMLQ99445 158 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 LY9Q9HBG7 655 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 SENP2Q9HC62 589 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 DDX4Q9NQI0 724 aaKnown RBP11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
SOX2-OT-244ENST00000627738 ARFGEF1Q9Y6D6 1849 aa11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 ERICH2A1L162 156 aa11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 PRELPP51888 382 aa11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 CCT2P78371 535 aaKnown RBP11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 PKP1Q13835 747 aa11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 SART3Q15020 963 aaKnown RBP11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 CIAPIN1Q6FI81 312 aa11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 NFXL1Q6ZNB6 911 aa11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 RAB11FIP4Q86YS3 637 aa11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 MTA3Q9BTC8 594 aa11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 HDAC9Q9UKV0 1011 aa11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 DDX60LQ5H9U9 1706 aaKnown RBP11.65□□□□□ -0.54
SOX2-OT-244ENST00000627738 FOCADQ5VW36 1801 aa11.65□□□□□ -0.55
SOX2-OT-244ENST00000627738 MYH1P12882 1939 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 CCDC69A6NI79 296 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 GOLGA8BA8MQT2 603 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 LIFRP42702 1097 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 CACNB3P54284 484 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 NFIAQ12857 509 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 WTAPQ15007 396 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 FAM47AQ5JRC9 791 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 SGMS1Q86VZ5 419 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 AGBL3Q8NEM8 1001 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 TNPO1Q92973 898 aaKnown RBP11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 PRMT6Q96LA8 375 aaPredicted RBP11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 UBAC1Q9BSL1 405 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 SYT17Q9BSW7 474 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 OSBPL5Q9H0X9 879 aaPredicted RBP11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 NCOA5Q9HCD5 579 aaKnown RBP11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 HPS5Q9UPZ3 1129 aa11.64□□□□□ -0.55
SOX2-OT-244ENST00000627738 TNKSO95271 1327 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 TSPY2A6NKD2 308 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 JAK2O60674 1132 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 CDK8P49336 464 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 TNIP1Q15025 636 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 SEC23AQ15436 765 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 NFKBIBQ15653 356 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 ARHGAP27Q6ZUM4 889 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 C16orf86Q6ZW13 317 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 TTC6Q86TZ1 520 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 IQCA1Q86XH1 822 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 OGFOD1Q8N543 542 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 SLC44A5Q8NCS7 719 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 ZSCAN10Q96SZ4 725 aaPredicted RBP11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 LLPHQ9BRT6 129 aaKnown RBP11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 IDI2Q9BXS1 227 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 TDRD3Q9H7E2 651 aaKnown RBP11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 MKNK2Q9HBH9 465 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 ZDHHC9Q9Y397 364 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 SLC12A7Q9Y666 1083 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 GOLGB1Q14789 3259 aaKnown RBP11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 ECM29Q5VYK3 1845 aa11.63□□□□□ -0.55
SOX2-OT-244ENST00000627738 ZBTB43O43298 467 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 CTDNEP1O95476 244 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 BRD1O95696 1058 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 RXRAP19793 462 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 NT5C2P49902 561 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 METAP2P50579 478 aaKnown RBP eCLIP11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 TFAP4Q01664 338 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 DLGAP5Q15398 846 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 APOA5Q6Q788 366 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 SYNE3Q6ZMZ3 975 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 MICU3Q86XE3 530 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 ZFPM1Q8IX07 1006 aa11.62□□□□□ -0.55
SOX2-OT-244ENST00000627738 ZNF444Q8N0Y2 327 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms