RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 DMRT2Q9Y5R5 561 aa9.87□□□□□ -0.83
VCL-206ENST00000623461 CALUO43852 315 aaPredicted RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 GNA14O95837 355 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 TSPY3P0CV98 308 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 TSPY8P0CW00 308 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 CYP2C19P33261 490 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 MORC3Q14149 939 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 TTC38Q5R3I4 469 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 LGSNQ5TDP6 509 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 LMBR1LQ6UX01 489 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 ANKLE2Q86XL3 938 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 TSC22D3Q99576 134 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 NOP53Q9NZM5 478 aaKnown RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 TMOD2Q9NZR1 351 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 SEPT2Q15019 361 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 ANKRD7Q92527 254 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 RRP36Q96EU6 259 aaKnown RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 FAM227BQ96M60 508 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 AMFRQ9UKV5 643 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 EIF4A2Q14240 407 aaKnown RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 RUNDC3BQ96NL0 473 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 PPP1R9AQ9ULJ8 1098 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 FAF1Q9UNN5 650 aaPredicted RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 GRIN2AQ12879 1464 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 TSPYL2Q9H2G4 693 aaPredicted RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 PPP1R1BQ9UD71 204 aaPredicted RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 ASIC3Q9UHC3 531 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 TPCN1Q9ULQ1 816 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 PCDHA7Q9UN72 937 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 ADGRL1O94910 1474 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 HMGB1P1B2RPK0 211 aaPredicted RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 FAM13AO94988 1023 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 CD2BP2O95400 341 aaKnown RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 IRX1P78414 480 aaPredicted RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 TAF11Q15544 211 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 FBXO41Q8TF61 875 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 TUBB6Q9BUF5 446 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 KIAA0232Q92628 1395 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 PPFIA2O75334 1257 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 DYNC1I2Q13409 638 aaKnown RBP9.86□□□□□ -0.83
VCL-206ENST00000623461 BEND3Q5T5X7 828 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 SH3GL3Q99963 347 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 PALD1Q9ULE6 856 aa9.86□□□□□ -0.83
VCL-206ENST00000623461 AKAP4Q5JQC9 854 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 PANX2Q96RD6 677 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 PSMB7Q99436 277 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 ABCB6Q9NP58 842 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 TMOD3Q9NYL9 352 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 FAM169AQ9Y6X4 670 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 PLB1Q6P1J6 1458 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 XAGE3Q8WTP9 111 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 FRMD4BQ9Y2L6 1034 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 STK24Q9Y6E0 443 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 RBM5P52756 815 aaKnown RBP eCLIP9.85□□□□□ -0.83
VCL-206ENST00000623461 ST5P78524 1137 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 MSANTD4Q8NCY6 345 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 ARMC2Q8NEN0 867 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 SYNCQ9H7C4 482 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 INTS9Q9NV88 658 aaKnown RBP9.85□□□□□ -0.83
VCL-206ENST00000623461 KRIT1O00522 736 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 HOXB7P09629 217 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 SKIP12755 728 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 ZSCAN20P17040 1043 aaPredicted RBP9.85□□□□□ -0.83
VCL-206ENST00000623461 NDUFA8P51970 172 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 ZKSCAN3Q9BRR0 538 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.85□□□□□ -0.83
VCL-206ENST00000623461 MAP3K5Q99683 1374 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 KRT15P19012 456 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 COG7P83436 770 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 SRLQ86TD4 932 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 CCDC105Q8IYK2 499 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 TYW1Q9NV66 732 aaKnown RBP9.85□□□□□ -0.83
VCL-206ENST00000623461 STAP2Q9UGK3 403 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 USP19O94966 1318 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 PPIP5K1Q6PFW1 1433 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 MAGEB6P1A0A0J9YX57 407 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 PPP6R2O75170 966 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 DCAF17Q5H9S7 520 aaPredicted RBP9.85□□□□□ -0.83
VCL-206ENST00000623461 C2CD5Q86YS7 1000 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 VSTM4Q8IW00 320 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 IFNL2Q8IZJ0 200 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 TCP11Q8WWU5 503 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 PHACTR3Q96KR7 559 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 TXLNGQ9NUQ3 528 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 GMNNO75496 209 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 TRIM37O94972 964 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 NNTQ13423 1086 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 TNNI3KQ59H18 835 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 C11orf57Q6ZUT1 292 aaPredicted RBP9.85□□□□□ -0.83
VCL-206ENST00000623461 PLA2G4DQ86XP0 818 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 ANKRD42Q8N9B4 389 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 WHAMMQ8TF30 809 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 FPGT-TNNI3KV9GXZ4 949 aa9.85□□□□□ -0.83
VCL-206ENST00000623461 PDE1CQ14123 709 aaPredicted RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 TTC19Q6DKK2 380 aaPredicted RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 ZNF521Q96K83 1311 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 MTHFSDQ2M296 383 aaKnown RBP9.84□□□□□ -0.83
VCL-206ENST00000623461 WDR78Q5VTH9 848 aa9.84□□□□□ -0.83
VCL-206ENST00000623461 RRAGAQ7L523 313 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms