RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 CTIFO43310 598 aaKnown RBP13.71□□□□□ -0.22
TP53-227ENST00000622645 VEGFAP15692 232 aaPredicted RBP13.71□□□□□ -0.22
TP53-227ENST00000622645 CFAP100Q494V2 611 aa13.71□□□□□ -0.22
TP53-227ENST00000622645 MTERF4Q7Z6M4 381 aaKnown RBP13.71□□□□□ -0.22
TP53-227ENST00000622645 EPSTI1Q96J88 318 aa13.71□□□□□ -0.22
TP53-227ENST00000622645 BCL11BQ9C0K0 894 aaPredicted RBP13.71□□□□□ -0.22
TP53-227ENST00000622645 ATP8A2Q9NTI2 1148 aa13.71□□□□□ -0.22
TP53-227ENST00000622645 ORC4O43929 436 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 USP17L8P0C7I0 530 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 CALM1P0DP23 149 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 CALM2P0DP24 149 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 CALM3P0DP25 149 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 NPY5RQ15761 445 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 E4F1Q66K89 784 aaPredicted RBP13.7□□□□□ -0.22
TP53-227ENST00000622645 MCM9Q9NXL9 1143 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 HOOK1Q9UJC3 728 aaKnown RBP13.7□□□□□ -0.22
TP53-227ENST00000622645 PAXBP1Q9Y5B6 917 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 ACTN4O43707 911 aaKnown RBP13.7□□□□□ -0.22
TP53-227ENST00000622645 DDAH1O94760 285 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 DZIP1Q86YF9 867 aaKnown RBP13.7□□□□□ -0.22
TP53-227ENST00000622645 ELOA2Q8IYF1 753 aaPredicted RBP13.7□□□□□ -0.22
TP53-227ENST00000622645 CCDC150Q8NCX0 1101 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 CTCFLQ8NI51 663 aaPredicted RBP13.7□□□□□ -0.22
TP53-227ENST00000622645 ANKIB1Q9P2G1 1089 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 CASZ1Q86V15 1759 aa13.7□□□□□ -0.22
TP53-227ENST00000622645 PDS5AQ29RF7 1337 aaKnown RBP13.7□□□□□ -0.22
TP53-227ENST00000622645 A0A087X0B3 334 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 TSPY2A6NKD2 308 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 TMEM232C9JQI7 657 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 SARSP49591 514 aaKnown RBP13.69□□□□□ -0.22
TP53-227ENST00000622645 FMR1Q06787 632 aaKnown RBP eCLIP13.69□□□□□ -0.22
TP53-227ENST00000622645 ZNF174Q15697 407 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 CCDC112Q8NEF3 446 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 DHX58Q96C10 678 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 BAZ2BQ9UIF8 2168 aaKnown RBP13.69□□□□□ -0.22
TP53-227ENST00000622645 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 NFIXQ14938 502 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 NT5DC1Q5TFE4 455 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 TRMT44Q8IYL2 757 aaKnown RBP13.69□□□□□ -0.22
TP53-227ENST00000622645 ZMYND15Q9H091 742 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 ARPP21Q9UBL0 812 aaPredicted RBP13.69□□□□□ -0.22
TP53-227ENST00000622645 ZNF831Q5JPB2 1677 aa13.69□□□□□ -0.22
TP53-227ENST00000622645 ADAMTS3O15072 1205 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 GOLGA8FQ08AF8 430 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 GOLGA8DPQ0D2H9 430 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 NAA30Q147X3 362 aaPredicted RBP13.68□□□□□ -0.22
TP53-227ENST00000622645 RCSD1Q6JBY9 416 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 TNFRSF25Q93038 417 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 GPR101Q96P66 508 aaPredicted RBP13.68□□□□□ -0.22
TP53-227ENST00000622645 MYH13Q9UKX3 1938 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 IRS2Q9Y4H2 1338 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 CASP1P29466 404 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 RFC4P35249 363 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 AFMP43652 599 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 MORC3Q14149 939 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 GRIK5Q16478 980 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 DYNLL2Q96FJ2 89 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 MED15Q96RN5 788 aa13.68□□□□□ -0.22
TP53-227ENST00000622645 DIXDC1Q155Q3 683 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 SBK1Q52WX2 424 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 SYMPKQ92797 1274 aaKnown RBP13.67□□□□□ -0.22
TP53-227ENST00000622645 BRMS1Q9HCU9 246 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 INTS13Q9NVM9 706 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 NFE2L3Q9Y4A8 694 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 MYH6P13533 1939 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 CBFA2T2O43439 604 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 TFAP4Q01664 338 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 MLKLQ8NB16 471 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 KCND1Q9NSA2 647 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 USP21Q9UK80 565 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 SCG2P13521 617 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 USP5P45974 858 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 NLRP5P59047 1200 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 NCBP1Q09161 790 aaKnown RBP13.67□□□□□ -0.22
TP53-227ENST00000622645 PTGDRQ13258 359 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 TTC38Q5R3I4 469 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 TRAPPC3LQ5T215 181 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 KANK3Q6NY19 840 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 PIK3AP1Q6ZUJ8 805 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 VSTM4Q8IW00 320 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 FNBP4Q8N3X1 1017 aaPredicted RBP13.67□□□□□ -0.22
TP53-227ENST00000622645 SH3RF3Q8TEJ3 882 aaPredicted RBP13.67□□□□□ -0.22
TP53-227ENST00000622645 PPP1R13BQ96KQ4 1090 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 IL17RBQ9NRM6 502 aa13.67□□□□□ -0.22
TP53-227ENST00000622645 VWA3AA6NCI4 1184 aa13.66□□□□□ -0.22
TP53-227ENST00000622645 LDHBP07195 334 aaKnown RBP13.66□□□□□ -0.22
TP53-227ENST00000622645 SPTY2D1Q68D10 685 aaPredicted RBP13.66□□□□□ -0.22
TP53-227ENST00000622645 SPATA20Q8TB22 786 aa13.66□□□□□ -0.22
TP53-227ENST00000622645 ANKRD7Q92527 254 aa13.66□□□□□ -0.22
TP53-227ENST00000622645 MKRN1Q9UHC7 482 aaKnown RBP13.66□□□□□ -0.22
TP53-227ENST00000622645 TOP1P11387 765 aaKnown RBP13.66□□□□□ -0.22
TP53-227ENST00000622645 CDK11BP21127 795 aaKnown RBP13.66□□□□□ -0.22
TP53-227ENST00000622645 C12orf60Q5U649 245 aa13.66□□□□□ -0.22
TP53-227ENST00000622645 FAM196AQ6ZSG2 479 aa13.66□□□□□ -0.22
TP53-227ENST00000622645 SAMSN1Q9NSI8 373 aaKnown RBP13.66□□□□□ -0.22
TP53-227ENST00000622645 UBAP1LF5GYI3 381 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 SLFN14P0C7P3 912 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 GRAPQ13588 217 aa13.65□□□□□ -0.22
TP53-227ENST00000622645 PFKFB3Q16875 520 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms