RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CRY2Q49AN0 593 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 DZIP1Q86YF9 867 aaKnown RBP7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 CRAMP1Q96RY5 1269 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 ZC3H12CQ9C0D7 883 aaKnown RBP7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 NAPBQ9H115 298 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 CICQ96RK0 1608 aaPredicted RBP7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 GOLGA8BA8MQT2 603 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 SLFN14P0C7P3 912 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 TDO2P48775 406 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 ADALQ6DHV7 355 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 NYAP1Q6ZVC0 841 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 NSUN7Q8NE18 718 aaKnown RBP7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 NACAP1Q9BZK3 213 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 SRGNP10124 158 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 GNG11P61952 73 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 ETF1P62495 437 aaKnown RBP7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 CCZ1BP86790 482 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 CCZ1P86791 482 aaPredicted RBP7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 TSGA10IPQ3SY00 556 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 ARFGAP3Q9NP61 516 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 SLC4A4Q9Y6R1 1079 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 SYKP43405 635 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 FANCCQ00597 558 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 HSP90B2PQ58FF3 399 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 DPP8Q6V1X1 898 aaPredicted RBP7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 LEKR1Q6ZMV7 388 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 CHST3Q7LGC8 479 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 MASTLQ96GX5 879 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 PDGFDQ9GZP0 370 aaPredicted RBP7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 GOLPH3LQ9H4A5 285 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 PCDHA7Q9UN72 937 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 MAGEB6P1A0A0J9YX57 407 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 CHRNA5P30532 468 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 HOXA10P31260 410 aaPredicted RBP7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 NLRP12P59046 1061 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 NFXL1Q6ZNB6 911 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 BRAPQ7Z569 592 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 DHX40Q8IX18 779 aaKnown RBP7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 OSBPL5Q9H0X9 879 aaPredicted RBP7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 DACH1Q9UI36 760 aa7.97□□□□□ -1.13
SRGAP3-213ENST00000618999 TAF1LQ8IZX4 1826 aa7.96□□□□□ -1.13
SRGAP3-213ENST00000618999 A0A0G2JLW4 131 aa7.96□□□□□ -1.13
SRGAP3-213ENST00000618999 MINDY4BA8MYZ0 360 aa7.96□□□□□ -1.13
SRGAP3-213ENST00000618999 CDKL5O76039 1030 aa7.96□□□□□ -1.13
SRGAP3-213ENST00000618999 EVCP57679 992 aa7.96□□□□□ -1.13
SRGAP3-213ENST00000618999 DPCR1Q3MIW9 517 aa7.96□□□□□ -1.13
SRGAP3-213ENST00000618999 STRBPQ96SI9 672 aaKnown RBP7.96□□□□□ -1.13
SRGAP3-213ENST00000618999 CARD6Q9BX69 1037 aa7.96□□□□□ -1.13
SRGAP3-213ENST00000618999 SCN7AQ01118 1682 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 KLF18A0A0U1RQI7 1052 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 A0A1W2PQ27 194 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 A0A1W2PQ64 194 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 A0A1W2PQD8 194 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 ERLIN1O75477 346 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 EIF3JO75822 258 aaKnown RBP7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 ZNF202O95125 648 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 YEATS4O95619 227 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 CLCN6P51797 869 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 NDUFA8P51970 172 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 MYL5Q02045 173 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 SAFBQ15424 915 aaKnown RBP eCLIP7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 RRP12Q5JTH9 1297 aaKnown RBP7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 SPTY2D1Q68D10 685 aaPredicted RBP7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 SP8Q8IXZ3 490 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 BCORQ6W2J9 1755 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 E7EWF7 191 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 PRKAB2O43741 272 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 LDHBP07195 334 aaKnown RBP7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 PRDX5P30044 214 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 SCNN1AP37088 669 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 NOM1Q5C9Z4 860 aaKnown RBP7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 TMC4Q7Z404 712 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 TBC1D16Q8TBP0 767 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 WDR66Q8TBY9 1149 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 TMX1Q9H3N1 280 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 ACBD3Q9H3P7 528 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 RTEL1Q9NZ71 1219 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 ATP6V0A2Q9Y487 856 aa7.96□□□□□ -1.14
SRGAP3-213ENST00000618999 TCHHQ07283 1943 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 PATL2C9JE40 543 aaKnown RBP7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 MARCKSP29966 332 aaPredicted RBP7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 LCORLQ8N3X6 602 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 CNNM3Q8NE01 707 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 CD209Q9NNX6 404 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 TAF1P21675 1872 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 ZBTB7AO95365 584 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 PNMA6AP0CW24 399 aaPredicted RBP7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 DOK7Q18PE1 504 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 OTUD7BQ6GQQ9 843 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 IFNL3Q8IZI9 196 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 SMARCC2Q8TAQ2 1214 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 SDR42E1Q8WUS8 393 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 ZNF274Q96GC6 653 aaPredicted RBP7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 AATFQ9NY61 560 aaKnown RBP eCLIP7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 POLLQ9UGP5 575 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 DDX60Q8IY21 1712 aaKnown RBP7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 ANKRD62A6NC57 917 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 EFCAB8A8MWE9 144 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 LGR5O75473 907 aa7.95□□□□□ -1.14
SRGAP3-213ENST00000618999 GNAT2P19087 354 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms