RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ARFGAP3Q9NP61 516 aa23.21■■□□□ 1.31
NEK3-208ENST00000618534 PPFIBP1Q86W92 1011 aa23.21■■□□□ 1.31
NEK3-208ENST00000618534 SMYD4Q8IYR2 804 aaPredicted RBP23.21■■□□□ 1.31
NEK3-208ENST00000618534 PAGE5Q96GU1 130 aa23.21■■□□□ 1.31
NEK3-208ENST00000618534 ZSWIM4Q9H7M6 989 aa23.21■■□□□ 1.31
NEK3-208ENST00000618534 ITGB4P16144 1822 aa23.21■■□□□ 1.31
NEK3-208ENST00000618534 SLIT2O94813 1529 aa23.21■■□□□ 1.31
NEK3-208ENST00000618534 BCAMP50895 628 aa23.2■■□□□ 1.3
NEK3-208ENST00000618534 RCAN1P53805 252 aa23.2■■□□□ 1.3
NEK3-208ENST00000618534 PPARAQ07869 468 aa23.2■■□□□ 1.3
NEK3-208ENST00000618534 RNF26Q9BY78 433 aaPredicted RBP23.2■■□□□ 1.3
NEK3-208ENST00000618534 ZCCHC17Q9NP64 241 aaKnown RBP23.2■■□□□ 1.3
NEK3-208ENST00000618534 ADD3Q9UEY8 706 aaKnown RBP23.2■■□□□ 1.3
NEK3-208ENST00000618534 PBX1P40424 430 aa23.2■■□□□ 1.3
NEK3-208ENST00000618534 SMC1AQ14683 1233 aaKnown RBP23.2■■□□□ 1.3
NEK3-208ENST00000618534 SH3RF1Q7Z6J0 888 aa23.2■■□□□ 1.3
NEK3-208ENST00000618534 DZIP3Q86Y13 1208 aaKnown RBP23.2■■□□□ 1.3
NEK3-208ENST00000618534 SYMPKQ92797 1274 aaKnown RBP23.2■■□□□ 1.3
NEK3-208ENST00000618534 MTA3Q9BTC8 594 aa23.2■■□□□ 1.3
NEK3-208ENST00000618534 RNF41Q9H4P4 317 aaPredicted RBP23.2■■□□□ 1.3
NEK3-208ENST00000618534 TNKSO95271 1327 aa23.2■■□□□ 1.3
NEK3-208ENST00000618534 hCG_1642624A0A1W2PR95 340 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 WNT7AO00755 349 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 PRDM1O75626 825 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 SEC23AQ15436 765 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 CDKAL1Q5VV42 579 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 CALCOCO1Q9P1Z2 691 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 SMIM22K7EJ46 135 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 TXLNAP40222 546 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 PKN1Q16512 942 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 FUT8Q9BYC5 575 aa23.19■■□□□ 1.3
NEK3-208ENST00000618534 MINDY4BA8MYZ0 360 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 AKAP17AQ02040 695 aaKnown RBP23.18■■□□□ 1.3
NEK3-208ENST00000618534 NAA15Q9BXJ9 866 aaKnown RBP23.18■■□□□ 1.3
NEK3-208ENST00000618534 ABCA3Q99758 1704 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 PLCH1Q4KWH8 1693 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 MFAP3LO75121 409 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 KRT2P35908 639 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 ST5P78524 1137 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 DPYDQ12882 1025 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 CT47A1Q5JQC4 288 aaPredicted RBP23.18■■□□□ 1.3
NEK3-208ENST00000618534 ZNF34Q8IZ26 560 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 SDR42E1Q8WUS8 393 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 LRP2BPQ9P2M1 347 aa23.18■■□□□ 1.3
NEK3-208ENST00000618534 NHSL1Q5SYE7 1610 aa23.17■■□□□ 1.3
NEK3-208ENST00000618534 CHMP4BP1P59074 171 aa23.17■■□□□ 1.3
NEK3-208ENST00000618534 ADGRA1Q86SQ6 560 aa23.17■■□□□ 1.3
NEK3-208ENST00000618534 NEK11Q8NG66 645 aa23.17■■□□□ 1.3
NEK3-208ENST00000618534 PHF20Q9BVI0 1012 aa23.17■■□□□ 1.3
NEK3-208ENST00000618534 RTL9Q8NET4 1388 aa23.17■■□□□ 1.3
NEK3-208ENST00000618534 PPP1R3GB7ZBB8 358 aa23.17■■□□□ 1.3
NEK3-208ENST00000618534 CASP14P31944 242 aa23.17■■□□□ 1.3
NEK3-208ENST00000618534 SRGAP1Q7Z6B7 1085 aa23.17■■□□□ 1.3
NEK3-208ENST00000618534 ERVV-1B6SEH8 477 aa23.16■■□□□ 1.3
NEK3-208ENST00000618534 KIF5CO60282 957 aa23.16■■□□□ 1.3
NEK3-208ENST00000618534 XBP1P17861 261 aa23.16■■□□□ 1.3
NEK3-208ENST00000618534 LONRF2Q1L5Z9 754 aa23.16■■□□□ 1.3
NEK3-208ENST00000618534 NOM1Q5C9Z4 860 aaKnown RBP23.16■■□□□ 1.3
NEK3-208ENST00000618534 PUF60Q9UHX1 559 aaKnown RBP23.16■■□□□ 1.3
NEK3-208ENST00000618534 SOS2Q07890 1332 aaPredicted RBP23.16■■□□□ 1.3
NEK3-208ENST00000618534 COBLO75128 1261 aa23.16■■□□□ 1.3
NEK3-208ENST00000618534 HNRNPH2P55795 449 aaKnown RBP23.16■■□□□ 1.3
NEK3-208ENST00000618534 GSDMAQ96QA5 445 aa23.16■■□□□ 1.3
NEK3-208ENST00000618534 PLEKHA8P1O95397 391 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 GYPCP04921 128 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 CYP7A1P22680 504 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 FXR1P51114 621 aaKnown RBP eCLIP23.15■■□□□ 1.3
NEK3-208ENST00000618534 FUT2Q10981 343 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 ZNF569Q5MCW4 686 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 SUSD4Q5VX71 490 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 RASGRP2Q7LDG7 609 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 ENAHQ8N8S7 591 aaPredicted RBP23.15■■□□□ 1.3
NEK3-208ENST00000618534 ESR2Q92731 530 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 STAMQ92783 540 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 CTAGE1Q96RT6 745 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 CTNND2Q9UQB3 1225 aa23.15■■□□□ 1.3
NEK3-208ENST00000618534 CCDC151A5D8V7 595 aa23.14■■□□□ 1.3
NEK3-208ENST00000618534 ZNF174Q15697 407 aa23.14■■□□□ 1.3
NEK3-208ENST00000618534 FILIP1LQ4L180 1135 aa23.14■■□□□ 1.3
NEK3-208ENST00000618534 JAKMIP3Q5VZ66 844 aa23.14■■□□□ 1.3
NEK3-208ENST00000618534 FERMT2Q96AC1 680 aa23.14■■□□□ 1.3
NEK3-208ENST00000618534 CDC23Q9UJX2 597 aa23.14■■□□□ 1.3
NEK3-208ENST00000618534 IQSEC3Q9UPP2 1182 aaPredicted RBP23.14■■□□□ 1.3
NEK3-208ENST00000618534 KAT6BQ8WYB5 2073 aa23.14■■□□□ 1.3
NEK3-208ENST00000618534 V9GY48 417 aaPredicted RBP23.14■■□□□ 1.29
NEK3-208ENST00000618534 BCL9O00512 1426 aa23.14■■□□□ 1.29
NEK3-208ENST00000618534 SEMA3EO15041 775 aa23.13■■□□□ 1.29
NEK3-208ENST00000618534 CCT6AP40227 531 aaKnown RBP23.13■■□□□ 1.29
NEK3-208ENST00000618534 ANKZF1Q9H8Y5 726 aa23.13■■□□□ 1.29
NEK3-208ENST00000618534 XIRP1Q702N8 1843 aaKnown RBP23.13■■□□□ 1.29
NEK3-208ENST00000618534 BRD3Q15059 726 aa23.13■■□□□ 1.29
NEK3-208ENST00000618534 ACRBPQ8NEB7 543 aa23.13■■□□□ 1.29
NEK3-208ENST00000618534 BCL9LQ86UU0 1499 aa23.13■■□□□ 1.29
NEK3-208ENST00000618534 ZBTB22O15209 634 aa23.12■■□□□ 1.29
NEK3-208ENST00000618534 PRPF3O43395 683 aaKnown RBP23.12■■□□□ 1.29
NEK3-208ENST00000618534 PPP2R5BQ15173 497 aa23.12■■□□□ 1.29
NEK3-208ENST00000618534 CNGA4Q8IV77 575 aa23.12■■□□□ 1.29
NEK3-208ENST00000618534 AK7Q96M32 723 aa23.12■■□□□ 1.29
NEK3-208ENST00000618534 MYH2Q9UKX2 1941 aa23.12■■□□□ 1.29
NEK3-208ENST00000618534 XDHP47989 1333 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms