RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 CHAMP1Q96JM3 812 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 TRMT1Q9NXH9 659 aaKnown RBP15.68■□□□□ 0.1
CIITA-213ENST00000618327 B4DLN1 442 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 PRKG1Q13976 671 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 ARHGAP27Q6ZUM4 889 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 CCDC186Q7Z3E2 898 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 BLIDQ8IZY5 108 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 PLCD4Q9BRC7 762 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 TMEM63CQ9P1W3 806 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 USP17L3A6NCW0 530 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 USP17L4A6NCW7 530 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 EN1Q05925 392 aaPredicted RBP15.68■□□□□ 0.1
CIITA-213ENST00000618327 CCDC181Q5TID7 509 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 USP17L1Q7RTZ2 530 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 RTKN2Q8IZC4 609 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 UBXN4Q92575 508 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 RBSNQ9H1K0 784 aa15.68■□□□□ 0.1
CIITA-213ENST00000618327 ERICH4A6NGS2 130 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 RAD17O75943 681 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 TDRD12Q587J7 1177 aaKnown RBP15.67■□□□□ 0.1
CIITA-213ENST00000618327 SV2BQ7L1I2 683 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 RNF26Q9BY78 433 aaPredicted RBP15.67■□□□□ 0.1
CIITA-213ENST00000618327 CLRN2A0PK11 232 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 C21orf2O43822 256 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 ENOX2Q16206 610 aaKnown RBP15.67■□□□□ 0.1
CIITA-213ENST00000618327 PRR5LQ6MZQ0 368 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 VPS36Q86VN1 386 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 CPXCR1Q8N123 301 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 CHURC1Q8WUH1 139 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 DYNLL2Q96FJ2 89 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 KNDC1Q76NI1 1749 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 GOLGA6L10A6NI86 522 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 ABCB5Q2M3G0 1257 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 CSRNP1Q96S65 589 aa15.67■□□□□ 0.1
CIITA-213ENST00000618327 GPSM2P81274 684 aa15.66■□□□□ 0.1
CIITA-213ENST00000618327 MYL5Q02045 173 aa15.66■□□□□ 0.1
CIITA-213ENST00000618327 GPKOWQ92917 476 aaPredicted RBP eCLIP15.66■□□□□ 0.1
CIITA-213ENST00000618327 GPHNQ9NQX3 736 aaPredicted RBP15.66■□□□□ 0.1
CIITA-213ENST00000618327 CCT6AP40227 531 aaKnown RBP15.66■□□□□ 0.1
CIITA-213ENST00000618327 KIF5CO60282 957 aa15.66■□□□□ 0.1
CIITA-213ENST00000618327 FMNL1O95466 1100 aaPredicted RBP15.66■□□□□ 0.1
CIITA-213ENST00000618327 TRIM21P19474 475 aaKnown RBP15.66■□□□□ 0.1
CIITA-213ENST00000618327 TBC1D10CQ8IV04 446 aa15.66■□□□□ 0.1
CIITA-213ENST00000618327 BIN2Q9UBW5 565 aaPredicted RBP15.66■□□□□ 0.1
CIITA-213ENST00000618327 LRWD1Q9UFC0 647 aa15.66■□□□□ 0.1
CIITA-213ENST00000618327 DALRD3Q5D0E6 543 aaKnown RBP15.65■□□□□ 0.1
CIITA-213ENST00000618327 KIF18AQ8NI77 898 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 BICDL2A1A5D9 508 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 CFBP00751 764 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 MAPK8IP2Q13387 824 aaPredicted RBP15.65■□□□□ 0.1
CIITA-213ENST00000618327 SLFN13Q68D06 897 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 STAG1Q8WVM7 1258 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 KIFC2Q96AC6 838 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 GOLGA6L7A0A1B0GV03 622 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 IFNAR1P17181 557 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 TOB2Q14106 344 aaPredicted RBP15.65■□□□□ 0.1
CIITA-213ENST00000618327 PODNQ7Z5L7 613 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 ZNF830Q96NB3 372 aaPredicted RBP15.65■□□□□ 0.1
CIITA-213ENST00000618327 DHX36Q9H2U1 1008 aaKnown RBP15.65■□□□□ 0.1
CIITA-213ENST00000618327 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.65■□□□□ 0.1
CIITA-213ENST00000618327 UBN2Q6ZU65 1347 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 CCDC174Q6PII3 467 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 SP8Q8IXZ3 490 aa15.65■□□□□ 0.1
CIITA-213ENST00000618327 SH3RF3Q8TEJ3 882 aaPredicted RBP15.65■□□□□ 0.1
CIITA-213ENST00000618327 ZBED4O75132 1171 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 FAM13AO94988 1023 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 CALCRLQ16602 461 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 DCAF15Q66K64 600 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 GALNT17Q6IS24 598 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 C16orf45Q96MC5 204 aaPredicted RBP15.64■□□□□ 0.09
CIITA-213ENST00000618327 PKD2L1Q9P0L9 805 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 HAUS3Q68CZ6 603 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 TTLL1O95922 423 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 ALX1Q15699 326 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 ZBTB21Q9ULJ3 1066 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 IFNKQ9P0W0 207 aa15.64■□□□□ 0.09
CIITA-213ENST00000618327 BCL9O00512 1426 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 TNNT1P13805 278 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 BICD1Q96G01 975 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 GPATCH4Q5T3I0 446 aaKnown RBP15.63■□□□□ 0.09
CIITA-213ENST00000618327 PSTPIP2Q9H939 334 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 PIM2Q9P1W9 311 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 TNS2Q63HR2 1409 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 ERLIN2O94905 339 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 SKILP12757 684 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 PFKFB1P16118 471 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 CDK8P49336 464 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 INF2Q27J81 1249 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 SNX29Q8TEQ0 813 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 ZNF512BQ96KM6 892 aaPredicted RBP15.63■□□□□ 0.09
CIITA-213ENST00000618327 TTC14Q96N46 770 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 CRAMP1Q96RY5 1269 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 PI4KBQ9UBF8 816 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 PCDHA7Q9UN72 937 aa15.63■□□□□ 0.09
CIITA-213ENST00000618327 USO1O60763 962 aaKnown RBP15.62■□□□□ 0.09
CIITA-213ENST00000618327 NT5C2P49902 561 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 CBX1P83916 185 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 ASPRV1Q53RT3 343 aa15.62■□□□□ 0.09
CIITA-213ENST00000618327 CCDC65Q8IXS2 484 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms