RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 LRRC4BQ9NT99 713 aa9.28□□□□□ -0.92
MALAT1-208ENST00000616527 SRP68Q9UHB9 627 aaKnown RBP9.28□□□□□ -0.92
MALAT1-208ENST00000616527 DENND2AQ9ULE3 1009 aa9.28□□□□□ -0.92
MALAT1-208ENST00000616527 AKAP11Q9UKA4 1901 aa9.28□□□□□ -0.92
MALAT1-208ENST00000616527 SBF2Q86WG5 1849 aa9.28□□□□□ -0.92
MALAT1-208ENST00000616527 C4BP0C0L5 1744 aa9.28□□□□□ -0.92
MALAT1-208ENST00000616527 KLRG2A4D1S0 409 aaPredicted RBP9.27□□□□□ -0.93
MALAT1-208ENST00000616527 FAM177BA6PVY3 158 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 PATL2C9JE40 543 aaKnown RBP9.27□□□□□ -0.93
MALAT1-208ENST00000616527 LARGE1O95461 756 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 MBD3O95983 291 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 CHGBP05060 677 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 FBXO45P0C2W1 286 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 CPA1P15085 419 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 SYT1P21579 422 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 NT5C2P49902 561 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 HMGN5P82970 282 aaKnown RBP9.27□□□□□ -0.93
MALAT1-208ENST00000616527 NFIXQ14938 502 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 CRY2Q49AN0 593 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 CAVIN4Q5BKX8 364 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 L1TD1Q5T7N2 865 aaKnown RBP9.27□□□□□ -0.93
MALAT1-208ENST00000616527 GLMNQ92990 594 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 LEMD3Q9Y2U8 911 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 KIF3AQ9Y496 699 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 TAF6LQ9Y6J9 622 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 ZNF532Q9HCE3 1301 aa9.27□□□□□ -0.93
MALAT1-208ENST00000616527 SOBPA7XYQ1 873 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 ZNF213O14771 459 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 MAN1A2O60476 641 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 IDH1O75874 414 aaKnown RBP9.26□□□□□ -0.93
MALAT1-208ENST00000616527 GJB2P29033 226 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 MCM5P33992 734 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 KCNQ4P56696 695 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 GRAPQ13588 217 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 GIMAP6Q6P9H5 292 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 PI16Q6UXB8 463 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 Q6ZUG5 572 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 TMC4Q7Z404 712 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 CCDC83Q8IWF9 413 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 MB21D2Q8IYB1 491 aaPredicted RBP9.26□□□□□ -0.93
MALAT1-208ENST00000616527 FLAD1Q8NFF5 587 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 NCOA7Q8NI08 942 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 SMARCC2Q8TAQ2 1214 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 GRAPLQ8TC17 118 aaPredicted RBP9.26□□□□□ -0.93
MALAT1-208ENST00000616527 ADAMTS19Q8TE59 1207 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 CELF1Q92879 486 aaKnown RBP9.26□□□□□ -0.93
MALAT1-208ENST00000616527 FAM84BQ96KN1 310 aaPredicted RBP9.26□□□□□ -0.93
MALAT1-208ENST00000616527 CALR3Q96L12 384 aaKnown RBP9.26□□□□□ -0.93
MALAT1-208ENST00000616527 MTMR6Q9Y217 621 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 IRS2Q9Y4H2 1338 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 TAF1LQ8IZX4 1826 aa9.26□□□□□ -0.93
MALAT1-208ENST00000616527 ERVH48-1M5A8F1 160 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 F13A1P00488 732 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 PCP11498 1178 aaKnown RBP9.25□□□□□ -0.93
MALAT1-208ENST00000616527 GYS1P13807 737 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 HOXA10P31260 410 aaPredicted RBP9.25□□□□□ -0.93
MALAT1-208ENST00000616527 RAB15P59190 212 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 VAC14Q08AM6 782 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 MCTP1Q6DN14 999 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 NOL8Q76FK4 1167 aaKnown RBP9.25□□□□□ -0.93
MALAT1-208ENST00000616527 AMIGO3Q86WK7 504 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 CNBD1Q8NA66 436 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 AIDAQ96BJ3 306 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 NACAP1Q9BZK3 213 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 TMPRSS4Q9NRS4 437 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 WWC3Q9ULE0 1092 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 PCDHB9Q9Y5E1 797 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 SALL1Q9NSC2 1324 aa9.25□□□□□ -0.93
MALAT1-208ENST00000616527 H3BM21 787 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 WIPF1O43516 503 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 DHX16O60231 1041 aaKnown RBP9.24□□□□□ -0.93
MALAT1-208ENST00000616527 BBOX1O75936 387 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 RCAN1P53805 252 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 ZNF445P59923 1031 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
MALAT1-208ENST00000616527 TRDNQ13061 729 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 NR1H3Q13133 447 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 SLFNL1Q499Z3 407 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 FAM182BQ5T319 152 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
MALAT1-208ENST00000616527 ATL3Q6DD88 541 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 NAA16Q6N069 864 aaPredicted RBP9.24□□□□□ -0.93
MALAT1-208ENST00000616527 BICDL1Q6ZP65 573 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 BRF1Q92994 677 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 TMEM87BQ96K49 555 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 CRAMP1Q96RY5 1269 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 CNNM2Q9H8M5 875 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 ANAPC4Q9UJX5 808 aa9.24□□□□□ -0.93
MALAT1-208ENST00000616527 DDX49Q9Y6V7 483 aaKnown RBP9.24□□□□□ -0.93
MALAT1-208ENST00000616527 GSG1L2A8MUP6 293 aa9.23□□□□□ -0.93
MALAT1-208ENST00000616527 SPINT1O43278 529 aa9.23□□□□□ -0.93
MALAT1-208ENST00000616527 PDIA3P30101 505 aaKnown RBP9.23□□□□□ -0.93
MALAT1-208ENST00000616527 HIBADHP31937 336 aaKnown RBP9.23□□□□□ -0.93
MALAT1-208ENST00000616527 LIFRP42702 1097 aa9.23□□□□□ -0.93
MALAT1-208ENST00000616527 MRE11P49959 708 aa9.23□□□□□ -0.93
MALAT1-208ENST00000616527 ST5P78524 1137 aa9.23□□□□□ -0.93
MALAT1-208ENST00000616527 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
MALAT1-208ENST00000616527 TXNRD1Q16881 649 aa9.23□□□□□ -0.93
MALAT1-208ENST00000616527 SPTY2D1Q68D10 685 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms