RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 MAP4K1Q92918 833 aa15.21■□□□□ 0.02
CCL4-201ENST00000613947 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.21■□□□□ 0.02
CCL4-201ENST00000613947 LSG1Q9H089 658 aaKnown RBP15.21■□□□□ 0.02
CCL4-201ENST00000613947 AS3MTQ9HBK9 375 aa15.21■□□□□ 0.02
CCL4-201ENST00000613947 A0A0G2JLL6 359 aaPredicted RBP15.2■□□□□ 0.02
CCL4-201ENST00000613947 MOGSQ13724 837 aa15.2■□□□□ 0.02
CCL4-201ENST00000613947 IMMTQ16891 758 aaKnown RBP15.2■□□□□ 0.02
CCL4-201ENST00000613947 FAM47AQ5JRC9 791 aa15.2■□□□□ 0.02
CCL4-201ENST00000613947 PRRT2Q7Z6L0 340 aaPredicted RBP15.2■□□□□ 0.02
CCL4-201ENST00000613947 IFNL1Q8IU54 200 aa15.2■□□□□ 0.02
CCL4-201ENST00000613947 CLEC10AQ8IUN9 316 aa15.2■□□□□ 0.02
CCL4-201ENST00000613947 TBC1D10CQ8IV04 446 aa15.2■□□□□ 0.02
CCL4-201ENST00000613947 ACER1Q8TDN7 264 aa15.2■□□□□ 0.02
CCL4-201ENST00000613947 TBC1D2Q9BYX2 928 aa15.2■□□□□ 0.02
CCL4-201ENST00000613947 ANO2Q9NQ90 1003 aa15.2■□□□□ 0.02
CCL4-201ENST00000613947 BACE1P56817 501 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 DGKZQ13574 1117 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 AKNAD1Q5T1N1 836 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 BEGAINQ9BUH8 593 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 RNF186Q9NXI6 227 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 USP17L10C9JJH3 530 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 ORC4O43929 436 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 TRPA1O75762 1119 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 HMGCS2P54868 508 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 TFAP4Q01664 338 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 MTMR2Q13614 643 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 MFSD6Q6ZSS7 791 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 SIAH1Q8IUQ4 282 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 STAG1Q8WVM7 1258 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 TOMM22Q9NS69 142 aa15.19■□□□□ 0.02
CCL4-201ENST00000613947 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
CCL4-201ENST00000613947 PTPRFP10586 1907 aa15.18■□□□□ 0.02
CCL4-201ENST00000613947 A0A1W2PRG0 241 aa15.18■□□□□ 0.02
CCL4-201ENST00000613947 BTBD19C9JJ37 291 aa15.18■□□□□ 0.02
CCL4-201ENST00000613947 RANBP6O60518 1105 aaKnown RBP15.18■□□□□ 0.02
CCL4-201ENST00000613947 TSPY3P0CV98 308 aa15.18■□□□□ 0.02
CCL4-201ENST00000613947 TSPY8P0CW00 308 aa15.18■□□□□ 0.02
CCL4-201ENST00000613947 HSPA1AP0DMV8 641 aaKnown RBP15.18■□□□□ 0.02
CCL4-201ENST00000613947 HSPA1BP0DMV9 641 aaKnown RBP15.18■□□□□ 0.02
CCL4-201ENST00000613947 ICA1Q05084 483 aa15.18■□□□□ 0.02
CCL4-201ENST00000613947 RRP12Q5JTH9 1297 aaKnown RBP15.18■□□□□ 0.02
CCL4-201ENST00000613947 NKX2-3Q8TAU0 364 aa15.18■□□□□ 0.02
CCL4-201ENST00000613947 KANSL2Q9H9L4 492 aa15.18■□□□□ 0.02
CCL4-201ENST00000613947 RBM8AQ9Y5S9 174 aaKnown RBP15.18■□□□□ 0.02
CCL4-201ENST00000613947 CYP21A2P08686 494 aa15.17■□□□□ 0.02
CCL4-201ENST00000613947 SH3D19Q5HYK7 790 aa15.17■□□□□ 0.02
CCL4-201ENST00000613947 OTUD7BQ6GQQ9 843 aa15.17■□□□□ 0.02
CCL4-201ENST00000613947 GADL1Q6ZQY3 521 aa15.17■□□□□ 0.02
CCL4-201ENST00000613947 FASTKD5Q7L8L6 764 aaKnown RBP15.17■□□□□ 0.02
CCL4-201ENST00000613947 NEDD1Q8NHV4 660 aa15.17■□□□□ 0.02
CCL4-201ENST00000613947 RNF41Q9H4P4 317 aaPredicted RBP15.17■□□□□ 0.02
CCL4-201ENST00000613947 IGKV6D-41A0A0C4DH26 115 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 TSPY2A6NKD2 308 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 C19orf81C9J6K1 198 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 EEF2P13639 858 aaKnown RBP15.16■□□□□ 0.02
CCL4-201ENST00000613947 ATP2B2Q01814 1243 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 ZYXQ15942 572 aaKnown RBP15.16■□□□□ 0.02
CCL4-201ENST00000613947 GPAT2Q6NUI2 795 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 CEP95Q96GE4 821 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 FEZ1Q99689 392 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 EMILIN3Q9NT22 766 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 TSKSQ9UJT2 592 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 TAF6LQ9Y6J9 622 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 NEDD4P46934 1319 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 ALDH1A1P00352 501 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 PCP11498 1178 aaKnown RBP15.16■□□□□ 0.02
CCL4-201ENST00000613947 TREML2Q5T2D2 321 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 PROCA1Q8NCQ7 364 aaPredicted RBP15.16■□□□□ 0.02
CCL4-201ENST00000613947 KIAA1683Q9H0B3 1180 aa15.16■□□□□ 0.02
CCL4-201ENST00000613947 GREB1LQ9C091 1923 aaPredicted RBP15.15■□□□□ 0.02
CCL4-201ENST00000613947 LAMA4Q16363 1823 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 PDHXO00330 501 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 FOXN1O15353 648 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 CA12O43570 354 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 NMT2O60551 498 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 TBC1D8O95759 1140 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 ANKRD23Q86SG2 305 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 R3HDMLQ9H3Y0 253 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 ARHGEF10LQ9HCE6 1279 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 IL17RBQ9NRM6 502 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 SAGE1Q9NXZ1 904 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 TMOD4Q9NZQ9 345 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 TMX2Q9Y320 296 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 PLIN4Q96Q06 1357 aa15.15■□□□□ 0.02
CCL4-201ENST00000613947 NECTIN1Q15223 517 aa15.14■□□□□ 0.01
CCL4-201ENST00000613947 USP17L2Q6R6M4 530 aa15.14■□□□□ 0.01
CCL4-201ENST00000613947 ESR2Q92731 530 aa15.14■□□□□ 0.01
CCL4-201ENST00000613947 CLIP2Q9UDT6 1046 aa15.14■□□□□ 0.01
CCL4-201ENST00000613947 AGTPBP1Q9UPW5 1226 aa15.14■□□□□ 0.01
CCL4-201ENST00000613947 FSD2A1L4K1 749 aa15.13■□□□□ 0.01
CCL4-201ENST00000613947 B4E1Z4 1266 aa15.13■□□□□ 0.01
CCL4-201ENST00000613947 KDM4AO75164 1064 aa15.13■□□□□ 0.01
CCL4-201ENST00000613947 USP14P54578 494 aa15.13■□□□□ 0.01
CCL4-201ENST00000613947 CRHR2Q13324 411 aa15.13■□□□□ 0.01
CCL4-201ENST00000613947 TAF1CQ15572 869 aaPredicted RBP15.13■□□□□ 0.01
CCL4-201ENST00000613947 KIAA1755Q5JYT7 1200 aa15.13■□□□□ 0.01
CCL4-201ENST00000613947 ZCCHC17Q9NP64 241 aaKnown RBP15.13■□□□□ 0.01
CCL4-201ENST00000613947 NYAP2Q9P242 653 aa15.13■□□□□ 0.01
CCL4-201ENST00000613947 ISY1Q9ULR0 285 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms