RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 FAM177A1Q8N128 213 aaPredicted RBP11.96□□□□□ -0.5
PABPC1-224ENST00000610907 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.5
PABPC1-224ENST00000610907 FBXW7Q969H0 707 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 TFCP2L1Q9NZI6 479 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 PCDHB6Q9Y5E3 794 aa11.96□□□□□ -0.5
PABPC1-224ENST00000610907 LAMB1P07942 1786 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 LY75O60449 1722 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 CYP2D7A0A087X1C5 515 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 BAG3O95817 575 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 KLRK1P26718 216 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 PRDX5P30044 214 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 SYCP1Q15431 976 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 DZIP1Q86YF9 867 aaKnown RBP11.95□□□□□ -0.5
PABPC1-224ENST00000610907 FOXP4Q8IVH2 680 aaPredicted RBP11.95□□□□□ -0.5
PABPC1-224ENST00000610907 CMTR1Q8N1G2 835 aaKnown RBP11.95□□□□□ -0.5
PABPC1-224ENST00000610907 SPATA20Q8TB22 786 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 OXER1Q8TDS5 423 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 SMARCE1Q969G3 411 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 PYM1Q9BRP8 204 aaKnown RBP11.95□□□□□ -0.5
PABPC1-224ENST00000610907 USP21Q9UK80 565 aa11.95□□□□□ -0.5
PABPC1-224ENST00000610907 XDHP47989 1333 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 POLR2DO15514 142 aaKnown RBP11.94□□□□□ -0.5
PABPC1-224ENST00000610907 CTIFO43310 598 aaKnown RBP11.94□□□□□ -0.5
PABPC1-224ENST00000610907 PRDM1O75626 825 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 LDHBP07195 334 aaKnown RBP11.94□□□□□ -0.5
PABPC1-224ENST00000610907 SFPQP23246 707 aaKnown RBP eCLIP11.94□□□□□ -0.5
PABPC1-224ENST00000610907 HMGB2P26583 209 aaKnown RBP11.94□□□□□ -0.5
PABPC1-224ENST00000610907 GNAQP50148 359 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 PTF1AQ7RTS3 328 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 ZNF804AQ7Z570 1209 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 AMOTL1Q8IY63 956 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 ENOX1Q8TC92 643 aaKnown RBP11.94□□□□□ -0.5
PABPC1-224ENST00000610907 TNFRSF25Q93038 417 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 HSD3B7Q9H2F3 369 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 SH3GLB2Q9NR46 395 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 TCP11L1Q9NUJ3 509 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 VPS54Q9P1Q0 977 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 MKRN1Q9UHC7 482 aaKnown RBP11.94□□□□□ -0.5
PABPC1-224ENST00000610907 TAF1LQ8IZX4 1826 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 ROBO3Q96MS0 1386 aa11.94□□□□□ -0.5
PABPC1-224ENST00000610907 CNTNAP5Q8WYK1 1306 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 PSDA5PKW4 1024 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-224ENST00000610907 TSPY2A6NKD2 308 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
PABPC1-224ENST00000610907 NPHP1O15259 732 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 CCP110O43303 1012 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 ACTN4O43707 911 aaKnown RBP11.93□□□□□ -0.5
PABPC1-224ENST00000610907 PLEKHA8P1O95397 391 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 SCG2P13521 617 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 CALML3P27482 149 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 ERCC5P28715 1186 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-224ENST00000610907 LMOD1P29536 600 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-224ENST00000610907 UBASH3AP57075 661 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 MORC3Q14149 939 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 PTPN14Q15678 1187 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 PFKFB3Q16875 520 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-224ENST00000610907 C12orf60Q5U649 245 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 NYAP1Q6ZVC0 841 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 TMC6Q7Z403 805 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 CCAR2Q8N163 923 aaKnown RBP11.93□□□□□ -0.5
PABPC1-224ENST00000610907 CCDC112Q8NEF3 446 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 CSRNP2Q9H175 543 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 ZNF287Q9HBT7 754 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 ANKIB1Q9P2G1 1089 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 SERTAD1Q9UHV2 236 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 MAN1B1Q9UKM7 699 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 TAOK2Q9UL54 1235 aa11.93□□□□□ -0.5
PABPC1-224ENST00000610907 SMIM22K7EJ46 135 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 ONECUT3O60422 494 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-224ENST00000610907 SERPINC1P01008 464 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 SLFN14P0C7P3 912 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 RBM10P98175 930 aaKnown RBP11.92□□□□□ -0.5
PABPC1-224ENST00000610907 ARID5BQ14865 1188 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 TXNRD3Q86VQ6 643 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 SRBD1Q8N5C6 995 aaKnown RBP11.92□□□□□ -0.5
PABPC1-224ENST00000610907 CNBD1Q8NA66 436 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 SHISA4Q96DD7 197 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 C16orf45Q96MC5 204 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-224ENST00000610907 KAT14Q9H8E8 782 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 MCM9Q9NXL9 1143 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 ATP2B4P23634 1241 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 USP5P45974 858 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 ATP2C1P98194 919 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-224ENST00000610907 GRIN1Q05586 938 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 NFIXQ14938 502 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 NPY5RQ15761 445 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 GLIPR1L2Q4G1C9 344 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 TTC38Q5R3I4 469 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 CEP135Q66GS9 1140 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 ISM2Q6H9L7 571 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 GALNT17Q6IS24 598 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 RCSD1Q6JBY9 416 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 SH3RF1Q7Z6J0 888 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 VSTM4Q8IW00 320 aa11.92□□□□□ -0.5
PABPC1-224ENST00000610907 ATP2B1P20020 1258 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 BMP6P22004 513 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 NLRP5P59047 1200 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 TFAP4Q01664 338 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 CRY2Q49AN0 593 aa11.91□□□□□ -0.5
PABPC1-224ENST00000610907 FAM47AQ5JRC9 791 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms