RNA–Protein interactions for RNA: ENST00000609525.1

CSNK2A1-208, Transcript of casein kinase 2 alpha 1, human

TSL 5

Gene CSNK2A1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK2A1-208	ENST00000609525	PIWIL2	Q8TC59	973 aa	Known RBP	7.66	□□□□□ -1.18
CSNK2A1-208	ENST00000609525	GAL3ST3	Q96A11	431 aa		7.66	□□□□□ -1.18
CSNK2A1-208	ENST00000609525	ADAMTS10	Q9H324	1103 aa		7.66	□□□□□ -1.18
CSNK2A1-208	ENST00000609525	CDK8	P49336	464 aa		7.65	□□□□□ -1.18
CSNK2A1-208	ENST00000609525	SV2B	Q7L1I2	683 aa		7.65	□□□□□ -1.18
CSNK2A1-208	ENST00000609525	FAM8A1	Q9UBU6	413 aa		7.65	□□□□□ -1.18
CSNK2A1-208	ENST00000609525	SPG7	Q9UQ90	795 aa		7.65	□□□□□ -1.18
CSNK2A1-208	ENST00000609525	SRF	P11831	508 aa		7.64	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	ETV3	P41162	512 aa		7.64	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	RETREG2	Q8NC44	543 aa		7.64	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	SETDB2	Q96T68	719 aa		7.64	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	IRF2BPL	Q9H1B7	796 aa		7.64	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	C12orf49	Q9H741	205 aa		7.64	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	MYO15B	Q96JP2	1530 aa		7.63	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	USP17L7	P0C7H9	530 aa		7.63	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	LMNB1	P20700	586 aa		7.63	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	TPP2	P29144	1249 aa	Predicted RBP	7.63	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	TRHR	P34981	398 aa	Predicted RBP	7.63	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	TTBK2	Q6IQ55	1244 aa		7.63	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	RNF32	Q9H0A6	362 aa		7.63	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	TRIT1	Q9H3H1	467 aa	Known RBP	7.63	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	TTF2	Q9UNY4	1162 aa	Known RBP	7.63	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	RBAK-RBAKDN	I3L0D1	243 aa		7.62	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	HOXA5	P20719	270 aa		7.62	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	ATP2B2	Q01814	1243 aa		7.62	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	FMR1	Q06787	632 aa	Known RBP eCLIP	7.62	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	WWC3	Q9ULE0	1092 aa		7.62	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	TACC3	Q9Y6A5	838 aa		7.62	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	WASH4P	A8MWX3	477 aa		7.61	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	7.61	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	MRPL41	Q8IXM3	137 aa	Known RBP	7.61	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	OXR1	Q8N573	874 aa		7.61	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	DPH2	Q9BQC3	489 aa	Predicted RBP	7.61	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	KRTAP9-3	Q9BYQ3	159 aa		7.61	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.61	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	DUSP13	Q9UII6	198 aa		7.61	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	GNE	Q9Y223	722 aa	Known RBP	7.61	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	GFRA2	O00451	464 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	PGR	P06401	933 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	SLC6A19	Q695T7	634 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	IRF2BP1	Q8IU81	584 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	LILRA2	Q8N149	483 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	PDZD8	Q8NEN9	1154 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	TMEM87B	Q96K49	555 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	C20orf173	Q96LM9	149 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525		Q96M66	194 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	SLC6A17	Q9H1V8	727 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	C19orf44	Q9H6X5	657 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	GPATCH2	Q9NW75	528 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	TJP2	Q9UDY2	1190 aa		7.6	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	RPS26	P62854	115 aa	Known RBP	7.59	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	GAB4	Q2WGN9	574 aa		7.59	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	RELT	Q969Z4	430 aa		7.59	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	MCOLN1	Q9GZU1	580 aa		7.59	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	PARD6A	Q9NPB6	346 aa		7.59	□□□□□ -1.19
CSNK2A1-208	ENST00000609525	ZGLP1	P0C6A0	271 aa		7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	DLG4	P78352	724 aa		7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	EGR3	Q06889	387 aa		7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	SEPT6	Q14141	434 aa		7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	ZNF605	Q86T29	641 aa		7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	BAHD1	Q8TBE0	780 aa	Predicted RBP	7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	DHX38	Q92620	1227 aa	Known RBP	7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	SYTL4	Q96C24	671 aa	Predicted RBP	7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	ZCCHC4	Q9H5U6	513 aa		7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	SP110	Q9HB58	689 aa		7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	CEP131	Q9UPN4	1083 aa		7.58	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	FITM1	A5D6W6	292 aa		7.57	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	PEX10	O60683	326 aa		7.57	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	BMP7	P18075	431 aa		7.57	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	PDE4B	Q07343	736 aa		7.57	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	TMEM132E	Q6IEE7	984 aa		7.57	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	DNAJB8	Q8NHS0	232 aa		7.57	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	CWC22	Q9HCG8	908 aa	Known RBP	7.57	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	PCDHB5	Q9Y5E4	795 aa		7.57	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	SEMA7A	O75326	666 aa		7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	LTK	P29376	864 aa		7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	CCDC85B	Q15834	202 aa	Predicted RBP	7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	MCAT	Q8IVS2	390 aa	Known RBP	7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	FRMD6	Q96NE9	622 aa		7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	GPR62	Q9BZJ7	368 aa		7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	KCNH3	Q9ULD8	1083 aa		7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	CNOT6	Q9ULM6	557 aa	Known RBP	7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	NES	P48681	1621 aa		7.56	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	INTS4	Q96HW7	963 aa	Known RBP	7.55	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	ASB16	Q96NS5	453 aa		7.55	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	ARID3A	Q99856	593 aa		7.55	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	YBX2	Q9Y2T7	364 aa	Known RBP	7.55	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	MYOCOS	A0A1B0GUC4	107 aa		7.54	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	PDE6B	P35913	854 aa		7.54	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	NR0B2	Q15466	257 aa		7.54	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	TIGD5	Q53EQ6	642 aa		7.54	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	SPPL2C	Q8IUH8	684 aa		7.54	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	DTWD2	Q8NBA8	298 aa		7.54	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	MIR1-1HG	Q9H1L0	117 aa		7.54	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	ADAM30	Q9UKF2	790 aa		7.54	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	EIF4B	P23588	611 aa	Known RBP	7.53	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	ZNF385B	Q569K4	471 aa		7.53	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	TCERG1L	Q5VWI1	586 aa		7.53	□□□□□ -1.2
CSNK2A1-208	ENST00000609525	AGMO	Q6ZNB7	445 aa		7.53	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms