RNA–Protein interactions for RNA: ENST00000609525.1

CSNK2A1-208, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 5

Gene CSNK2A1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-208ENST00000609525 AEBP2Q6ZN18 517 aaPredicted RBP30.82■■■□□ 2.52
CSNK2A1-208ENST00000609525 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
CSNK2A1-208ENST00000609525 SENP3Q9H4L4 574 aaPredicted RBP26.36■■□□□ 1.81
CSNK2A1-208ENST00000609525 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
CSNK2A1-208ENST00000609525 FOXD1Q16676 465 aa24.54■■□□□ 1.52
CSNK2A1-208ENST00000609525 PLPPR3Q6T4P5 718 aa23.35■■□□□ 1.33
CSNK2A1-208ENST00000609525 MSH5O43196 834 aa23.04■■□□□ 1.28
CSNK2A1-208ENST00000609525 PIAS4Q8N2W9 510 aaPredicted RBP22.95■■□□□ 1.26
CSNK2A1-208ENST00000609525 PPP6R1Q9UPN7 881 aa22.88■■□□□ 1.25
CSNK2A1-208ENST00000609525 ADRA2BP18089 450 aa22.82■■□□□ 1.24
CSNK2A1-208ENST00000609525 POTEDQ86YR6 584 aa22.57■■□□□ 1.2
CSNK2A1-208ENST00000609525 MAPK8IP2Q13387 824 aaPredicted RBP20.98■□□□□ 0.95
CSNK2A1-208ENST00000609525 SCAF1Q9H7N4 1312 aaKnown RBP20.95■□□□□ 0.94
CSNK2A1-208ENST00000609525 DMRT2Q9Y5R5 561 aa20.87■□□□□ 0.93
CSNK2A1-208ENST00000609525 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
CSNK2A1-208ENST00000609525 CNKSR2Q8WXI2 1034 aa20.09■□□□□ 0.81
CSNK2A1-208ENST00000609525 DCAF8L1A6NGE4 600 aa20.08■□□□□ 0.81
CSNK2A1-208ENST00000609525 HOXD11P31277 338 aaPredicted RBP20.07■□□□□ 0.8
CSNK2A1-208ENST00000609525 RNF216Q9NWF9 866 aaPredicted RBP19.93■□□□□ 0.78
CSNK2A1-208ENST00000609525 CACNB1Q02641 598 aaPredicted RBP19.83■□□□□ 0.77
CSNK2A1-208ENST00000609525 NCBP3Q53F19 620 aaKnown RBP19.69■□□□□ 0.74
CSNK2A1-208ENST00000609525 RNF39Q9H2S5 420 aa19.62■□□□□ 0.73
CSNK2A1-208ENST00000609525 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
CSNK2A1-208ENST00000609525 C1QBPQ07021 282 aaKnown RBP19.36■□□□□ 0.69
CSNK2A1-208ENST00000609525 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
CSNK2A1-208ENST00000609525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.18■□□□□ 0.66
CSNK2A1-208ENST00000609525 KCNA4P22459 653 aa18.91■□□□□ 0.62
CSNK2A1-208ENST00000609525 U3KPZ7 1027 aaPredicted RBP18.71■□□□□ 0.59
CSNK2A1-208ENST00000609525 CAPN15O75808 1086 aa18.49■□□□□ 0.55
CSNK2A1-208ENST00000609525 SLC4A2P04920 1241 aa18.47■□□□□ 0.55
CSNK2A1-208ENST00000609525 SPINK5Q9NQ38 1064 aaPredicted RBP18.47■□□□□ 0.55
CSNK2A1-208ENST00000609525 DSG3P32926 999 aa18.34■□□□□ 0.53
CSNK2A1-208ENST00000609525 APLP2Q06481 763 aa18.26■□□□□ 0.51
CSNK2A1-208ENST00000609525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
CSNK2A1-208ENST00000609525 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
CSNK2A1-208ENST00000609525 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
CSNK2A1-208ENST00000609525 ZNF219Q9P2Y4 722 aaPredicted RBP18.13■□□□□ 0.49
CSNK2A1-208ENST00000609525 SAMD1Q6SPF0 538 aaPredicted RBP18.1■□□□□ 0.49
CSNK2A1-208ENST00000609525 ABCB7O75027 752 aa18.04■□□□□ 0.48
CSNK2A1-208ENST00000609525 MYCNP04198 464 aaPredicted RBP17.92■□□□□ 0.46
CSNK2A1-208ENST00000609525 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
CSNK2A1-208ENST00000609525 POTEHQ6S545 545 aa17.69■□□□□ 0.42
CSNK2A1-208ENST00000609525 FOXD4L1Q9NU39 408 aa17.69■□□□□ 0.42
CSNK2A1-208ENST00000609525 POLA2Q14181 598 aa17.65■□□□□ 0.42
CSNK2A1-208ENST00000609525 RBM42Q9BTD8 480 aaKnown RBP17.56■□□□□ 0.4
CSNK2A1-208ENST00000609525 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
CSNK2A1-208ENST00000609525 ZBTB22O15209 634 aa17.36■□□□□ 0.37
CSNK2A1-208ENST00000609525 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
CSNK2A1-208ENST00000609525 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
CSNK2A1-208ENST00000609525 ATXN8OSP0DMR3 200 aa17.16■□□□□ 0.34
CSNK2A1-208ENST00000609525 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
CSNK2A1-208ENST00000609525 OSCARQ8IYS5 282 aa17.07■□□□□ 0.32
CSNK2A1-208ENST00000609525 REM2Q8IYK8 340 aaPredicted RBP16.95■□□□□ 0.3
CSNK2A1-208ENST00000609525 FBLN2P98095 1184 aa16.88■□□□□ 0.29
CSNK2A1-208ENST00000609525 SPDYE2BA6NHP3 402 aa16.76■□□□□ 0.27
CSNK2A1-208ENST00000609525 PITPNM1O00562 1244 aa16.76■□□□□ 0.27
CSNK2A1-208ENST00000609525 SPDYE6P0CI01 402 aa16.76■□□□□ 0.27
CSNK2A1-208ENST00000609525 SPDYE2Q495Y8 402 aa16.76■□□□□ 0.27
CSNK2A1-208ENST00000609525 PIP4P2Q8N4L2 257 aa16.75■□□□□ 0.27
CSNK2A1-208ENST00000609525 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
CSNK2A1-208ENST00000609525 FXR2P51116 673 aaKnown RBP eCLIP16.63■□□□□ 0.25
CSNK2A1-208ENST00000609525 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
CSNK2A1-208ENST00000609525 SP7Q8TDD2 431 aaPredicted RBP16.55■□□□□ 0.24
CSNK2A1-208ENST00000609525 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
CSNK2A1-208ENST00000609525 HAX1O00165 279 aa16.5■□□□□ 0.23
CSNK2A1-208ENST00000609525 SPDYE1Q8NFV5 336 aaPredicted RBP16.5■□□□□ 0.23
CSNK2A1-208ENST00000609525 SSUH2Q9Y2M2 353 aa16.49■□□□□ 0.23
CSNK2A1-208ENST00000609525 CLEC11AQ9Y240 323 aa16.48■□□□□ 0.23
CSNK2A1-208ENST00000609525 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
CSNK2A1-208ENST00000609525 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
CSNK2A1-208ENST00000609525 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
CSNK2A1-208ENST00000609525 EVX2Q03828 476 aa16.22■□□□□ 0.19
CSNK2A1-208ENST00000609525 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
CSNK2A1-208ENST00000609525 CHADLQ6NUI6 762 aa16.13■□□□□ 0.17
CSNK2A1-208ENST00000609525 C19orf67A6NJJ6 358 aa16.1■□□□□ 0.17
CSNK2A1-208ENST00000609525 FARP1Q9Y4F1 1045 aaPredicted RBP15.9■□□□□ 0.14
CSNK2A1-208ENST00000609525 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
CSNK2A1-208ENST00000609525 GABBR2O75899 941 aa15.89■□□□□ 0.13
CSNK2A1-208ENST00000609525 STAG3Q9UJ98 1225 aa15.87■□□□□ 0.13
CSNK2A1-208ENST00000609525 CD44P16070 742 aaKnown RBP15.82■□□□□ 0.12
CSNK2A1-208ENST00000609525 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
CSNK2A1-208ENST00000609525 CLCN6P51797 869 aa15.65■□□□□ 0.1
CSNK2A1-208ENST00000609525 ZRANB1Q9UGI0 708 aa15.61■□□□□ 0.09
CSNK2A1-208ENST00000609525 ZNF579Q8NAF0 562 aaKnown RBP15.56■□□□□ 0.08
CSNK2A1-208ENST00000609525 LHX8Q68G74 356 aa15.54■□□□□ 0.08
CSNK2A1-208ENST00000609525 POTEIP0CG38 1075 aa15.52■□□□□ 0.08
CSNK2A1-208ENST00000609525 PAK3O75914 559 aaPredicted RBP15.5■□□□□ 0.07
CSNK2A1-208ENST00000609525 NPM1P06748 294 aaKnown RBP eCLIP15.5■□□□□ 0.07
CSNK2A1-208ENST00000609525 DCBLD2Q96PD2 775 aa15.49■□□□□ 0.07
CSNK2A1-208ENST00000609525 PROM2Q8N271 834 aa15.44■□□□□ 0.06
CSNK2A1-208ENST00000609525 MNX1P50219 401 aaPredicted RBP15.43■□□□□ 0.06
CSNK2A1-208ENST00000609525 GALR2O43603 387 aaPredicted RBP15.38■□□□□ 0.05
CSNK2A1-208ENST00000609525 PHF12Q96QT6 1004 aa15.36■□□□□ 0.05
CSNK2A1-208ENST00000609525 PLEKHG5O94827 1062 aa15.22■□□□□ 0.03
CSNK2A1-208ENST00000609525 MIER1Q8N108 512 aa15.2■□□□□ 0.02
CSNK2A1-208ENST00000609525 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
CSNK2A1-208ENST00000609525 MS4A3Q96HJ5 214 aa15.14■□□□□ 0.01
CSNK2A1-208ENST00000609525 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
CSNK2A1-208ENST00000609525 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
CSNK2A1-208ENST00000609525 PLCD3Q8N3E9 789 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms