RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 PRKAG2Q9UGJ0 569 aa18.38■□□□□ 0.53
SSBP4-214ENST00000607020 GH2P01242 217 aa18.37■□□□□ 0.53
SSBP4-214ENST00000607020 ATP2B2Q01814 1243 aa18.37■□□□□ 0.53
SSBP4-214ENST00000607020 KIAA1683Q9H0B3 1180 aa18.37■□□□□ 0.53
SSBP4-214ENST00000607020 SEMA6BQ9H3T3 888 aa18.37■□□□□ 0.53
SSBP4-214ENST00000607020 CWC22Q9HCG8 908 aaKnown RBP18.37■□□□□ 0.53
SSBP4-214ENST00000607020 RTP1P59025 263 aa18.36■□□□□ 0.53
SSBP4-214ENST00000607020 ARRDC4Q8NCT1 418 aa18.36■□□□□ 0.53
SSBP4-214ENST00000607020 FAM161BQ96MY7 647 aa18.36■□□□□ 0.53
SSBP4-214ENST00000607020 CDX2Q99626 313 aaPredicted RBP18.36■□□□□ 0.53
SSBP4-214ENST00000607020 CYP2E1P05181 493 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-214ENST00000607020 CYBAP13498 195 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 RARSP54136 660 aaKnown RBP18.35■□□□□ 0.53
SSBP4-214ENST00000607020 ATN1P54259 1190 aaPredicted RBP18.35■□□□□ 0.53
SSBP4-214ENST00000607020 SHHQ15465 462 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 CCDC158Q5M9N0 1113 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 TRPV1Q8NER1 839 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 NPLOC4Q8TAT6 608 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 EHD4Q9H223 541 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 SNRKQ9NRH2 765 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 BTBD7Q9P203 1132 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 IVNS1ABPQ9Y6Y0 642 aa18.35■□□□□ 0.53
SSBP4-214ENST00000607020 STRNO43815 780 aa18.34■□□□□ 0.53
SSBP4-214ENST00000607020 GNAI2P04899 355 aa18.34■□□□□ 0.53
SSBP4-214ENST00000607020 CNGA1P29973 690 aa18.34■□□□□ 0.53
SSBP4-214ENST00000607020 SMAD3P84022 425 aaKnown RBP18.34■□□□□ 0.53
SSBP4-214ENST00000607020 SNX17Q15036 470 aa18.34■□□□□ 0.53
SSBP4-214ENST00000607020 OLFML2BQ68BL8 750 aa18.34■□□□□ 0.53
SSBP4-214ENST00000607020 SLC39A5Q6ZMH5 540 aa18.34■□□□□ 0.53
SSBP4-214ENST00000607020 SAP30BPQ9UHR5 308 aaKnown RBP18.34■□□□□ 0.53
SSBP4-214ENST00000607020 NDUFB9Q9Y6M9 179 aa18.34■□□□□ 0.53
SSBP4-214ENST00000607020 LAMA2P24043 3122 aaKnown RBP18.34■□□□□ 0.53
SSBP4-214ENST00000607020 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
SSBP4-214ENST00000607020 VCAM1P19320 739 aa18.33■□□□□ 0.52
SSBP4-214ENST00000607020 CYP2C19P33261 490 aa18.33■□□□□ 0.52
SSBP4-214ENST00000607020 TTC39AQ5SRH9 613 aa18.33■□□□□ 0.52
SSBP4-214ENST00000607020 C1orf53Q5VUE5 145 aa18.33■□□□□ 0.52
SSBP4-214ENST00000607020 MAFAQ8NHW3 353 aaPredicted RBP18.33■□□□□ 0.52
SSBP4-214ENST00000607020 FEZ1Q99689 392 aa18.33■□□□□ 0.52
SSBP4-214ENST00000607020 SERPINB13Q9UIV8 391 aa18.33■□□□□ 0.52
SSBP4-214ENST00000607020 SPDYE16A6NNV3 312 aaPredicted RBP18.32■□□□□ 0.52
SSBP4-214ENST00000607020 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
SSBP4-214ENST00000607020 WDR78Q5VTH9 848 aa18.32■□□□□ 0.52
SSBP4-214ENST00000607020 TMED8Q6PL24 325 aaPredicted RBP18.32■□□□□ 0.52
SSBP4-214ENST00000607020 DBNDD2Q9BQY9 259 aa18.32■□□□□ 0.52
SSBP4-214ENST00000607020 FPGT-TNNI3KV9GXZ4 949 aa18.32■□□□□ 0.52
SSBP4-214ENST00000607020 ZAP70P43403 619 aa18.31■□□□□ 0.52
SSBP4-214ENST00000607020 DYNLL1P63167 89 aaKnown RBP18.31■□□□□ 0.52
SSBP4-214ENST00000607020 ZYXQ15942 572 aaKnown RBP18.31■□□□□ 0.52
SSBP4-214ENST00000607020 CERKLQ49MI3 558 aaPredicted RBP18.31■□□□□ 0.52
SSBP4-214ENST00000607020 C9orf50Q5SZB4 431 aa18.31■□□□□ 0.52
SSBP4-214ENST00000607020 GJC2Q5T442 439 aaPredicted RBP18.31■□□□□ 0.52
SSBP4-214ENST00000607020 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
SSBP4-214ENST00000607020 ACER1Q8TDN7 264 aa18.31■□□□□ 0.52
SSBP4-214ENST00000607020 PIH1D3Q9NQM4 214 aaKnown RBP18.31■□□□□ 0.52
SSBP4-214ENST00000607020 PRDM6Q9NQX0 595 aa18.31■□□□□ 0.52
SSBP4-214ENST00000607020 HOXC10Q9NYD6 342 aa18.31■□□□□ 0.52
SSBP4-214ENST00000607020 ATP11BQ9Y2G3 1177 aa18.31■□□□□ 0.52
SSBP4-214ENST00000607020 VCANP13611 3396 aa18.31■□□□□ 0.52
SSBP4-214ENST00000607020 DNAH12Q6ZR08 3092 aa18.31■□□□□ 0.52
SSBP4-214ENST00000607020 TMEM265A0A087WTH1 108 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 CCER2I3L3R5 266 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 SEPT4O43236 478 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 CYP7A1P22680 504 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 POLA2Q14181 598 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 ABCB5Q2M3G0 1257 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 DPP9Q86TI2 863 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 SHCBP1Q8NEM2 672 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 BADQ92934 168 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 TTYH1Q9H313 450 aaPredicted RBP18.3■□□□□ 0.52
SSBP4-214ENST00000607020 RPAP3Q9H6T3 665 aaPredicted RBP18.3■□□□□ 0.52
SSBP4-214ENST00000607020 CABP5Q9NP86 173 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 TTC28Q96AY4 2481 aa18.3■□□□□ 0.52
SSBP4-214ENST00000607020 SIPA1L1O43166 1804 aa18.29■□□□□ 0.52
SSBP4-214ENST00000607020 KBTBD13C9JR72 458 aa18.29■□□□□ 0.52
SSBP4-214ENST00000607020 IPO8O15397 1037 aaKnown RBP18.29■□□□□ 0.52
SSBP4-214ENST00000607020 ADORA2AP29274 412 aa18.29■□□□□ 0.52
SSBP4-214ENST00000607020 COG2Q14746 738 aa18.29■□□□□ 0.52
SSBP4-214ENST00000607020 RAB3GAP1Q15042 981 aa18.29■□□□□ 0.52
SSBP4-214ENST00000607020 MOV10L1Q9BXT6 1211 aaKnown RBP18.29■□□□□ 0.52
SSBP4-214ENST00000607020 TRIM43BA6NCK2 446 aa18.28■□□□□ 0.52
SSBP4-214ENST00000607020 GUCY1A2P33402 732 aa18.28■□□□□ 0.52
SSBP4-214ENST00000607020 USP5P45974 858 aa18.28■□□□□ 0.52
SSBP4-214ENST00000607020 TRIM60Q495X7 471 aa18.28■□□□□ 0.52
SSBP4-214ENST00000607020 ABRAQ8N0Z2 381 aa18.28■□□□□ 0.52
SSBP4-214ENST00000607020 SYMPKQ92797 1274 aaKnown RBP18.28■□□□□ 0.52
SSBP4-214ENST00000607020 TRIM43Q96BQ3 446 aaPredicted RBP18.28■□□□□ 0.52
SSBP4-214ENST00000607020 PDLIM7Q9NR12 457 aa18.28■□□□□ 0.52
SSBP4-214ENST00000607020 SLC5A4Q9NY91 659 aa18.28■□□□□ 0.52
SSBP4-214ENST00000607020 ATAD5Q96QE3 1844 aa18.28■□□□□ 0.52
SSBP4-214ENST00000607020 COBLO75128 1261 aa18.27■□□□□ 0.52
SSBP4-214ENST00000607020 SHMT1P34896 483 aa18.27■□□□□ 0.52
SSBP4-214ENST00000607020 SSH3Q8TE77 659 aa18.27■□□□□ 0.52
SSBP4-214ENST00000607020 MYLIPQ8WY64 445 aa18.27■□□□□ 0.52
SSBP4-214ENST00000607020 SPATC1LQ9H0A9 340 aa18.27■□□□□ 0.52
SSBP4-214ENST00000607020 NRBP1Q9UHY1 535 aa18.27■□□□□ 0.52
SSBP4-214ENST00000607020 TRIM27P14373 513 aa18.26■□□□□ 0.51
SSBP4-214ENST00000607020 ADCYAP1R1P41586 468 aa18.26■□□□□ 0.51
SSBP4-214ENST00000607020 ATP8B2P98198 1209 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms