RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 GPR108Q9NPR9 543 aa17.44■□□□□ 0.38
PPFIA3-206ENST00000602655 HELLSQ9NRZ9 838 aa17.44■□□□□ 0.38
PPFIA3-206ENST00000602655 UBE2Q2LH0YL09 131 aa17.43■□□□□ 0.38
PPFIA3-206ENST00000602655 CALRP27797 417 aaKnown RBP17.43■□□□□ 0.38
PPFIA3-206ENST00000602655 SF3A1Q15459 793 aaKnown RBP17.43■□□□□ 0.38
PPFIA3-206ENST00000602655 POTEAQ6S8J7 498 aa17.43■□□□□ 0.38
PPFIA3-206ENST00000602655 ABCA3Q99758 1704 aa17.43■□□□□ 0.38
PPFIA3-206ENST00000602655 CCT5P48643 541 aa17.43■□□□□ 0.38
PPFIA3-206ENST00000602655 RNF217Q8TC41 542 aa17.43■□□□□ 0.38
PPFIA3-206ENST00000602655 FTOQ9C0B1 505 aaKnown RBP eCLIP17.43■□□□□ 0.38
PPFIA3-206ENST00000602655 MED4Q9NPJ6 270 aa17.43■□□□□ 0.38
PPFIA3-206ENST00000602655 ATP2B2Q01814 1243 aa17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 COL23A1Q86Y22 540 aaPredicted RBP17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 SUGP1Q8IWZ8 645 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 PHKBQ93100 1093 aa17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 FAM43BQ6ZT52 329 aaPredicted RBP17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 DHX32Q7L7V1 743 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 FSIP1Q8NA03 581 aa17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 SIPA1L3O60292 1781 aaPredicted RBP17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 EBAG9O00559 213 aa17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 WDHD1O75717 1129 aaPredicted RBP17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 CHRNA5P30532 468 aa17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 HNRNPH1P31943 449 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 ADD1P35611 737 aaKnown RBP17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 AIFM3Q96NN9 605 aa17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 DOT1LQ8TEK3 1739 aa17.42■□□□□ 0.38
PPFIA3-206ENST00000602655 FRMD3A2A2Y4 597 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 GRIK5Q16478 980 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 IQUBQ8NA54 791 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 PHLPP2Q6ZVD8 1323 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 IFIT3O14879 490 aaKnown RBP17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 TUBB4AP04350 444 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 SARNPP82979 210 aaKnown RBP17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 DDR1Q08345 913 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 ST3GAL1Q11201 340 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 WDR24Q96S15 920 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 RIC1Q4ADV7 1423 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 ITGB4P16144 1822 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 TXLNAP40222 546 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 SCRN1Q12765 414 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 PICALMQ13492 652 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 TTF1Q15361 905 aaPredicted RBP17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 FAM47AQ5JRC9 791 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 RABGGTAQ92696 567 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 GDAP1L1Q96MZ0 367 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 CFAP45Q9UL16 551 aa17.41■□□□□ 0.38
PPFIA3-206ENST00000602655 CCDC151A5D8V7 595 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 PPFIA4O75335 1185 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 CHMP4BP1P59074 171 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 DHX58Q96C10 678 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 BSDC1Q9NW68 430 aaPredicted RBP17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 IMPACTQ9P2X3 320 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 ARFGEF2Q9Y6D5 1785 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 SLURP2P0DP57 97 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 CYP2D6P10635 497 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 NF2P35240 595 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 SCNN1DP51172 638 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 RBM5P52756 815 aaKnown RBP eCLIP17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 SWT1Q5T5J6 900 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 DHX40Q8IX18 779 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 IFNL3Q8IZI9 196 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 BAZ2BQ9UIF8 2168 aaKnown RBP17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 MAGEB6P1A0A0J9YX57 407 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 CTAGE5O15320 804 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 KRT32Q14532 448 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 ABCB6Q9NP58 842 aa17.4■□□□□ 0.38
PPFIA3-206ENST00000602655 INPP5BP32019 993 aa17.39■□□□□ 0.37
PPFIA3-206ENST00000602655 TTC19Q6DKK2 380 aaPredicted RBP17.39■□□□□ 0.37
PPFIA3-206ENST00000602655 FAM107BQ9H098 131 aa17.39■□□□□ 0.37
PPFIA3-206ENST00000602655 SCAF8Q9UPN6 1271 aaKnown RBP17.39■□□□□ 0.37
PPFIA3-206ENST00000602655 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
PPFIA3-206ENST00000602655 TOP1P11387 765 aaKnown RBP17.39■□□□□ 0.37
PPFIA3-206ENST00000602655 GTF2IP78347 998 aa17.39■□□□□ 0.37
PPFIA3-206ENST00000602655 UBXN6Q9BZV1 441 aa17.39■□□□□ 0.37
PPFIA3-206ENST00000602655 CAPN7Q9Y6W3 813 aa17.39■□□□□ 0.37
PPFIA3-206ENST00000602655 FGFR2P21802 821 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 TMEM67Q5HYA8 995 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 CEP57Q86XR8 500 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 NCOA7Q8NI08 942 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 OSBPL5Q9H0X9 879 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 LZTFL1Q9NQ48 299 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 USP17L12C9JPN9 530 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 USP17L21D6R901 530 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 ZFYP08048 801 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 PDE6BP35913 854 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 GSCP56915 257 aaPredicted RBP17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 UBASH3AP57075 661 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 GPSM2P81274 684 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 BRD3Q15059 726 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 KIF4BQ2VIQ3 1234 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 AFAP1L1Q8TED9 768 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 STRBPQ96SI9 672 aaKnown RBP17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 DBNDD1Q9H9R9 158 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 TAF1P21675 1872 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 USP5P45974 858 aa17.38■□□□□ 0.37
PPFIA3-206ENST00000602655 PTPDC1A2A3K4 754 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms