RNA–Protein interactions for RNA: ENST00000602303.5

UBE2E3-204, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 5

Gene UBE2E3, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-204ENST00000602303 CCDC174Q6PII3 467 aa8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L2Q6R6M4 530 aa8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 KLHDC4Q8TBB5 520 aa8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 RNPC3Q96LT9 517 aaKnown RBP8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 GAS2L1Q99501 681 aaPredicted RBP8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 USP44Q9H0E7 712 aa8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 RTN4Q9NQC3 1192 aaKnown RBP8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 SLC5A4Q9NY91 659 aa8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 ATP11BQ9Y2G3 1177 aa8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 ZNF236Q9UL36 1845 aa8.43□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L15C9J2P7 530 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L13C9JLJ4 530 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L11C9JVI0 530 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L18D6R9N7 530 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L22D6RA61 530 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L17D6RBQ6 530 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L19D6RCP7 530 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L20D6RJB6 530 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 KIAA0355O15063 1070 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 CNGA1P29973 690 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 USP14P54578 494 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 USP17L24Q0WX57 530 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 RASGRF1Q13972 1273 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 ATF7IPQ6VMQ6 1270 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 ZNF579Q8NAF0 562 aaKnown RBP8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 IL27Q8NEV9 243 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 TOX2Q96NM4 488 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 ZNF576Q9H609 170 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 ABCF2Q9UG63 623 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 AKAP2Q9Y2D5 859 aa8.42□□□□□ -1.06
UBE2E3-204ENST00000602303 CHD9Q3L8U1 2897 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 TRIM43BA6NCK2 446 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 CLTBP09497 229 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 MECOMQ03112 1051 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 MVPQ14764 893 aaKnown RBP8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 GRIN2CQ14957 1233 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 AAK1Q2M2I8 961 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 TRIM60Q495X7 471 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 ABRAQ8N0Z2 381 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 SHCBP1Q8NEM2 672 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 ADAMTS19Q8TE59 1207 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 TRIM43Q96BQ3 446 aaPredicted RBP8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 NSUN4Q96CB9 384 aaKnown RBP8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 TIFAQ96CG3 184 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 UHRF1Q96T88 793 aaPredicted RBP8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 NOL10Q9BSC4 688 aaKnown RBP8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 TSPYL2Q9H2G4 693 aaPredicted RBP8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 PRDM5Q9NQX1 630 aaPredicted RBP8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 HCN4Q9Y3Q4 1203 aa8.41□□□□□ -1.06
UBE2E3-204ENST00000602303 ROBO3Q96MS0 1386 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 MYO9BQ13459 2157 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 FAM196BA6NMK8 535 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 BAG3O95817 575 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 SLURP2P0DP57 97 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 FPGSQ05932 587 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 RRP1BQ14684 758 aaKnown RBP8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 GJC2Q5T442 439 aaPredicted RBP8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 CATSPERGQ6ZRH7 1159 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 ANKRD33Q7Z3H0 272 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 CERS3Q8IU89 383 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 USP38Q8NB14 1042 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 PAGR1Q9BTK6 254 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 TRIM34Q9BYJ4 488 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 COPRSQ9NQ92 184 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 EMILIN3Q9NT22 766 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 FLRT1Q9NZU1 646 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 CXXC1Q9P0U4 656 aaPredicted RBP8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 ZBTB21Q9ULJ3 1066 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 PHF24Q9UPV7 400 aa8.4□□□□□ -1.06
UBE2E3-204ENST00000602303 SPDYE4A6NLX3 237 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 CNMDO75829 334 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 RAG1P15918 1043 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 CYP2C19P33261 490 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 PPP4CP60510 307 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 TLE2Q04725 743 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 LRRC41Q15345 812 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 TMED8Q6PL24 325 aaPredicted RBP8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 POTEEQ6S8J3 1075 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 DPP9Q86TI2 863 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 TEX11Q8IYF3 940 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 CRACR2BQ8N4Y2 399 aaPredicted RBP8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 MB21D1Q8N884 522 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 TRPV1Q8NER1 839 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 NPLOC4Q8TAT6 608 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 TSEN34Q9BSV6 310 aaKnown RBP8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 KIAA1683Q9H0B3 1180 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
UBE2E3-204ENST00000602303 XIRP2A4UGR9 3374 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 MROH7Q68CQ1 1323 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 DCDC2CA8MYV0 355 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 HLA-DOAP06340 250 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 ADCYAP1R1P41586 468 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 PPIGQ13427 754 aaKnown RBP eCLIP8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 RAB30Q15771 203 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 RASIP1Q5U651 963 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 WDR78Q5VTH9 848 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 SH3RF1Q7Z6J0 888 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 RNF180Q86T96 592 aa8.38□□□□□ -1.07
UBE2E3-204ENST00000602303 ZNF384Q8TF68 577 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms