RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ELNP15502 786 aa19.04■□□□□ 0.64
VRK3-221ENST00000600284 GUCY1A2P33402 732 aa19.04■□□□□ 0.64
VRK3-221ENST00000600284 AMOTL1Q8IY63 956 aa19.04■□□□□ 0.64
VRK3-221ENST00000600284 SHISA4Q96DD7 197 aa19.04■□□□□ 0.64
VRK3-221ENST00000600284 UNC93B1Q9H1C4 597 aa19.04■□□□□ 0.64
VRK3-221ENST00000600284 TXNRD2Q9NNW7 524 aa19.04■□□□□ 0.64
VRK3-221ENST00000600284 PRKAB2O43741 272 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 SGPL1O95470 568 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 MAPK4P31152 587 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 ERVK-9P63128 1117 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 ERVK-24P63145 666 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 SEPT2Q15019 361 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 SLFNL1Q499Z3 407 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 CATSPERGQ6ZRH7 1159 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 TMEM179Q6ZVK1 233 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 ACER1Q8TDN7 264 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 U2AF1L4Q8WU68 220 aaKnown RBP19.03■□□□□ 0.64
VRK3-221ENST00000600284 RABGAP1Q9Y3P9 1069 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 NAV1Q8NEY1 1877 aa19.03■□□□□ 0.64
VRK3-221ENST00000600284 SLC34A2O95436 690 aa19.02■□□□□ 0.64
VRK3-221ENST00000600284 VCAM1P19320 739 aa19.02■□□□□ 0.64
VRK3-221ENST00000600284 RRP1P56182 461 aaKnown RBP19.02■□□□□ 0.64
VRK3-221ENST00000600284 ZYXQ15942 572 aaKnown RBP19.02■□□□□ 0.64
VRK3-221ENST00000600284 Q3C1V9 767 aa19.02■□□□□ 0.64
VRK3-221ENST00000600284 C12orf60Q5U649 245 aa19.02■□□□□ 0.64
VRK3-221ENST00000600284 LBX2Q6XYB7 198 aa19.02■□□□□ 0.64
VRK3-221ENST00000600284 KBTBD3Q8NAB2 608 aa19.02■□□□□ 0.64
VRK3-221ENST00000600284 SOCS4Q8WXH5 440 aa19.02■□□□□ 0.64
VRK3-221ENST00000600284 CCDC17Q96LX7 622 aa19.02■□□□□ 0.64
VRK3-221ENST00000600284 PUS7LQ9H0K6 701 aaKnown RBP19.02■□□□□ 0.64
VRK3-221ENST00000600284 PCDHB15Q9Y5E8 787 aa19.02■□□□□ 0.64
VRK3-221ENST00000600284 DOCK3Q8IZD9 2030 aa19.01■□□□□ 0.63
VRK3-221ENST00000600284 MPHOSPH10O00566 681 aaKnown RBP19.01■□□□□ 0.63
VRK3-221ENST00000600284 HMGCRP04035 888 aa19.01■□□□□ 0.63
VRK3-221ENST00000600284 CYP2D6P10635 497 aa19.01■□□□□ 0.63
VRK3-221ENST00000600284 XRCC5P13010 732 aaKnown RBP19.01■□□□□ 0.63
VRK3-221ENST00000600284 EVX2Q03828 476 aa19.01■□□□□ 0.63
VRK3-221ENST00000600284 NUDT12Q9BQG2 462 aa19.01■□□□□ 0.63
VRK3-221ENST00000600284 PAK6Q9NQU5 681 aaPredicted RBP19.01■□□□□ 0.63
VRK3-221ENST00000600284 SLC4A4Q9Y6R1 1079 aa19.01■□□□□ 0.63
VRK3-221ENST00000600284 TTC41PQ6P2S7 1318 aa19■□□□□ 0.63
VRK3-221ENST00000600284 USP17L12C9JPN9 530 aa19■□□□□ 0.63
VRK3-221ENST00000600284 USP17L21D6R901 530 aa19■□□□□ 0.63
VRK3-221ENST00000600284 ZFYP08048 801 aaPredicted RBP19■□□□□ 0.63
VRK3-221ENST00000600284 CCNA1P78396 465 aa19■□□□□ 0.63
VRK3-221ENST00000600284 POTEEQ6S8J3 1075 aa19■□□□□ 0.63
VRK3-221ENST00000600284 UBE2Q1Q7Z7E8 422 aa19■□□□□ 0.63
VRK3-221ENST00000600284 CCAR1Q8IX12 1150 aaKnown RBP19■□□□□ 0.63
VRK3-221ENST00000600284 TRMT44Q8IYL2 757 aaKnown RBP19■□□□□ 0.63
VRK3-221ENST00000600284 DYNLL2Q96FJ2 89 aa19■□□□□ 0.63
VRK3-221ENST00000600284 PAGR1Q9BTK6 254 aa19■□□□□ 0.63
VRK3-221ENST00000600284 CHGBP05060 677 aa18.99■□□□□ 0.63
VRK3-221ENST00000600284 CDK8P49336 464 aa18.99■□□□□ 0.63
VRK3-221ENST00000600284 LRRFIP1Q32MZ4 808 aaKnown RBP18.99■□□□□ 0.63
VRK3-221ENST00000600284 GIMAP6Q6P9H5 292 aa18.99■□□□□ 0.63
VRK3-221ENST00000600284 C16orf86Q6ZW13 317 aa18.99■□□□□ 0.63
VRK3-221ENST00000600284 SLC44A5Q8NCS7 719 aa18.99■□□□□ 0.63
VRK3-221ENST00000600284 STRBPQ96SI9 672 aaKnown RBP18.99■□□□□ 0.63
VRK3-221ENST00000600284 RPAP3Q9H6T3 665 aaPredicted RBP18.99■□□□□ 0.63
VRK3-221ENST00000600284 HOXC10Q9NYD6 342 aa18.99■□□□□ 0.63
VRK3-221ENST00000600284 A0A1W2PRG0 241 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 ERC2O15083 957 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 RNF113AO15541 343 aaKnown RBP18.98■□□□□ 0.63
VRK3-221ENST00000600284 PEX10O60683 326 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 TFRCP02786 760 aaKnown RBP18.98■□□□□ 0.63
VRK3-221ENST00000600284 CTR9Q6PD62 1173 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 GPR142Q7Z601 462 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 PLEKHH3Q7Z736 793 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 APPBP2Q92624 585 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 USP6NLQ92738 828 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 HTATIP2Q9BUP3 242 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 PORCNQ9H237 461 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 SH2D4AQ9H788 454 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 ARHGEF10LQ9HCE6 1279 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 ARPP21Q9UBL0 812 aaPredicted RBP18.98■□□□□ 0.63
VRK3-221ENST00000600284 RPTORQ8N122 1335 aa18.98■□□□□ 0.63
VRK3-221ENST00000600284 CNMDO75829 334 aa18.97■□□□□ 0.63
VRK3-221ENST00000600284 GLRX3O76003 335 aaKnown RBP18.97■□□□□ 0.63
VRK3-221ENST00000600284 COG2Q14746 738 aa18.97■□□□□ 0.63
VRK3-221ENST00000600284 SBK1Q52WX2 424 aa18.97■□□□□ 0.63
VRK3-221ENST00000600284 MORN1Q5T089 497 aa18.97■□□□□ 0.63
VRK3-221ENST00000600284 LPAR1Q92633 364 aa18.97■□□□□ 0.63
VRK3-221ENST00000600284 DEFB118Q96PH6 123 aa18.97■□□□□ 0.63
VRK3-221ENST00000600284 CRISPLD2Q9H0B8 497 aa18.97■□□□□ 0.63
VRK3-221ENST00000600284 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.97■□□□□ 0.63
VRK3-221ENST00000600284 HMX1Q9NP08 348 aaPredicted RBP18.97■□□□□ 0.63
VRK3-221ENST00000600284 TMX2Q9Y320 296 aa18.97■□□□□ 0.63
VRK3-221ENST00000600284 MYH7P12883 1935 aa18.97■□□□□ 0.63
VRK3-221ENST00000600284 CYP2D7A0A087X1C5 515 aa18.96■□□□□ 0.63
VRK3-221ENST00000600284 SPDYE16A6NNV3 312 aaPredicted RBP18.96■□□□□ 0.63
VRK3-221ENST00000600284 FARP2O94887 1054 aaPredicted RBP18.96■□□□□ 0.63
VRK3-221ENST00000600284 AKR1B1P15121 316 aa18.96■□□□□ 0.63
VRK3-221ENST00000600284 GNAT2P19087 354 aa18.96■□□□□ 0.63
VRK3-221ENST00000600284 CYP2B6P20813 491 aa18.96■□□□□ 0.63
VRK3-221ENST00000600284 RGS2P41220 211 aa18.96■□□□□ 0.63
VRK3-221ENST00000600284 ICA1Q05084 483 aa18.96■□□□□ 0.63
VRK3-221ENST00000600284 SIAH1Q8IUQ4 282 aa18.96■□□□□ 0.63
VRK3-221ENST00000600284 TRIB2Q92519 343 aa18.96■□□□□ 0.63
VRK3-221ENST00000600284 OSBP2Q969R2 916 aa18.96■□□□□ 0.63
VRK3-221ENST00000600284 KANSL2Q9H9L4 492 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms