RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 ANAPC4Q9UJX5 808 aa23.81■■□□□ 1.4
IRF3-221ENST00000598808 TSPY2A6NKD2 308 aa23.81■■□□□ 1.4
IRF3-221ENST00000598808 HMGCS2P54868 508 aa23.81■■□□□ 1.4
IRF3-221ENST00000598808 IFNL1Q8IU54 200 aa23.81■■□□□ 1.4
IRF3-221ENST00000598808 RNF41Q9H4P4 317 aaPredicted RBP23.81■■□□□ 1.4
IRF3-221ENST00000598808 TMOD4Q9NZQ9 345 aa23.81■■□□□ 1.4
IRF3-221ENST00000598808 TSKSQ9UJT2 592 aa23.81■■□□□ 1.4
IRF3-221ENST00000598808 IGF2BP3O00425 579 aaKnown RBP eCLIP23.8■■□□□ 1.4
IRF3-221ENST00000598808 RAD21O60216 631 aa23.8■■□□□ 1.4
IRF3-221ENST00000598808 EIF5BO60841 1220 aaKnown RBP23.8■■□□□ 1.4
IRF3-221ENST00000598808 TRPA1O75762 1119 aa23.8■■□□□ 1.4
IRF3-221ENST00000598808 GUCY1A2P33402 732 aa23.8■■□□□ 1.4
IRF3-221ENST00000598808 TM4SF4P48230 202 aa23.8■■□□□ 1.4
IRF3-221ENST00000598808 TFAP4Q01664 338 aa23.8■■□□□ 1.4
IRF3-221ENST00000598808 WDR18Q9BV38 432 aa23.8■■□□□ 1.4
IRF3-221ENST00000598808 ARHGEF10LQ9HCE6 1279 aa23.8■■□□□ 1.4
IRF3-221ENST00000598808 RBM8AQ9Y5S9 174 aaKnown RBP23.8■■□□□ 1.4
IRF3-221ENST00000598808 A0A0G2JLL6 359 aaPredicted RBP23.79■■□□□ 1.4
IRF3-221ENST00000598808 USP17L10C9JJH3 530 aa23.79■■□□□ 1.4
IRF3-221ENST00000598808 DGKZQ13574 1117 aa23.79■■□□□ 1.4
IRF3-221ENST00000598808 AKNAD1Q5T1N1 836 aa23.79■■□□□ 1.4
IRF3-221ENST00000598808 FASTKD5Q7L8L6 764 aaKnown RBP23.79■■□□□ 1.4
IRF3-221ENST00000598808 PRRT2Q7Z6L0 340 aaPredicted RBP23.79■■□□□ 1.4
IRF3-221ENST00000598808 ACER1Q8TDN7 264 aa23.79■■□□□ 1.4
IRF3-221ENST00000598808 LSG1Q9H089 658 aaKnown RBP23.79■■□□□ 1.4
IRF3-221ENST00000598808 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.79■■□□□ 1.4
IRF3-221ENST00000598808 LBX1P52954 281 aa23.78■■□□□ 1.4
IRF3-221ENST00000598808 BACE1P56817 501 aa23.78■■□□□ 1.4
IRF3-221ENST00000598808 NBPF3Q9H094 633 aa23.78■■□□□ 1.4
IRF3-221ENST00000598808 RNF186Q9NXI6 227 aa23.78■■□□□ 1.4
IRF3-221ENST00000598808 NEDD4P46934 1319 aa23.77■■□□□ 1.4
IRF3-221ENST00000598808 PTPRFP10586 1907 aa23.77■■□□□ 1.4
IRF3-221ENST00000598808 BTBD19C9JJ37 291 aa23.77■■□□□ 1.4
IRF3-221ENST00000598808 FAM43AQ8N2R8 423 aa23.77■■□□□ 1.4
IRF3-221ENST00000598808 STAG1Q8WVM7 1258 aa23.77■■□□□ 1.4
IRF3-221ENST00000598808 PTPN18Q99952 460 aa23.77■■□□□ 1.4
IRF3-221ENST00000598808 KANSL2Q9H9L4 492 aa23.77■■□□□ 1.4
IRF3-221ENST00000598808 PRDM10Q9NQV6 1147 aa23.77■■□□□ 1.4
IRF3-221ENST00000598808 TESPA1A2RU30 521 aaPredicted RBP23.76■■□□□ 1.39
IRF3-221ENST00000598808 ALDH1A1P00352 501 aa23.76■■□□□ 1.39
IRF3-221ENST00000598808 SH2D4AQ9H788 454 aa23.76■■□□□ 1.39
IRF3-221ENST00000598808 TACC3Q9Y6A5 838 aa23.76■■□□□ 1.39
IRF3-221ENST00000598808 ORC4O43929 436 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 USP14P54578 494 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 TAF1CQ15572 869 aaPredicted RBP23.75■■□□□ 1.39
IRF3-221ENST00000598808 USP17L2Q6R6M4 530 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 MAP4K1Q92918 833 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 C19orf81C9J6K1 198 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 PDHXO00330 501 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 CA12O43570 354 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 TBC1D8O95759 1140 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 PCP11498 1178 aaKnown RBP23.75■■□□□ 1.39
IRF3-221ENST00000598808 EEF2P13639 858 aaKnown RBP23.75■■□□□ 1.39
IRF3-221ENST00000598808 ESR2Q92731 530 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 CEP95Q96GE4 821 aa23.75■■□□□ 1.39
IRF3-221ENST00000598808 CYP21A2P08686 494 aa23.74■■□□□ 1.39
IRF3-221ENST00000598808 TRDNQ13061 729 aa23.74■■□□□ 1.39
IRF3-221ENST00000598808 TREML2Q5T2D2 321 aa23.74■■□□□ 1.39
IRF3-221ENST00000598808 ANKRD23Q86SG2 305 aa23.74■■□□□ 1.39
IRF3-221ENST00000598808 PROCA1Q8NCQ7 364 aaPredicted RBP23.74■■□□□ 1.39
IRF3-221ENST00000598808 NEDD1Q8NHV4 660 aa23.74■■□□□ 1.39
IRF3-221ENST00000598808 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.74■■□□□ 1.39
IRF3-221ENST00000598808 UPF2Q9HAU5 1272 aaKnown RBP23.74■■□□□ 1.39
IRF3-221ENST00000598808 LOC285556D6RIA3 1793 aa23.73■■□□□ 1.39
IRF3-221ENST00000598808 B4E1Z4 1266 aa23.73■■□□□ 1.39
IRF3-221ENST00000598808 REC8O95072 547 aa23.73■■□□□ 1.39
IRF3-221ENST00000598808 KIAA1683Q9H0B3 1180 aa23.73■■□□□ 1.39
IRF3-221ENST00000598808 SAGE1Q9NXZ1 904 aa23.73■■□□□ 1.39
IRF3-221ENST00000598808 CLIP2Q9UDT6 1046 aa23.73■■□□□ 1.39
IRF3-221ENST00000598808 STX8Q9UNK0 236 aa23.73■■□□□ 1.39
IRF3-221ENST00000598808 AGTPBP1Q9UPW5 1226 aa23.73■■□□□ 1.39
IRF3-221ENST00000598808 GREB1LQ9C091 1923 aaPredicted RBP23.73■■□□□ 1.39
IRF3-221ENST00000598808 A0A1W2PRG0 241 aa23.72■■□□□ 1.39
IRF3-221ENST00000598808 NMT2O60551 498 aa23.72■■□□□ 1.39
IRF3-221ENST00000598808 KDM4AO75164 1064 aa23.72■■□□□ 1.39
IRF3-221ENST00000598808 MOGSQ13724 837 aa23.72■■□□□ 1.39
IRF3-221ENST00000598808 RALYLQ86SE5 291 aaKnown RBP23.72■■□□□ 1.39
IRF3-221ENST00000598808 LRRC47Q8N1G4 583 aaKnown RBP23.72■■□□□ 1.39
IRF3-221ENST00000598808 KRT23Q9C075 422 aa23.72■■□□□ 1.39
IRF3-221ENST00000598808 CNNM2Q9H8M5 875 aa23.72■■□□□ 1.39
IRF3-221ENST00000598808 ZFYVE28Q9HCC9 887 aa23.72■■□□□ 1.39
IRF3-221ENST00000598808 ISY1Q9ULR0 285 aaKnown RBP23.72■■□□□ 1.39
IRF3-221ENST00000598808 PLIN4Q96Q06 1357 aa23.72■■□□□ 1.39
IRF3-221ENST00000598808 TTLL1O95922 423 aa23.71■■□□□ 1.39
IRF3-221ENST00000598808 FGRP09769 529 aa23.71■■□□□ 1.39
IRF3-221ENST00000598808 PABPC4Q13310 644 aaKnown RBP eCLIP23.71■■□□□ 1.396e-8■■■■□ 22.6
IRF3-221ENST00000598808 CRHR2Q13324 411 aa23.71■■□□□ 1.39
IRF3-221ENST00000598808 SH3D19Q5HYK7 790 aa23.71■■□□□ 1.39
IRF3-221ENST00000598808 GPAT2Q6NUI2 795 aa23.71■■□□□ 1.39
IRF3-221ENST00000598808 SPICE1Q8N0Z3 855 aa23.71■■□□□ 1.39
IRF3-221ENST00000598808 PARK7Q99497 189 aaKnown RBP23.71■■□□□ 1.39
IRF3-221ENST00000598808 GOPCQ9HD26 462 aa23.71■■□□□ 1.39
IRF3-221ENST00000598808 EMILIN3Q9NT22 766 aa23.71■■□□□ 1.39
IRF3-221ENST00000598808 IRX3P78415 501 aaPredicted RBP23.7■■□□□ 1.38
IRF3-221ENST00000598808 RNF20Q5VTR2 975 aa23.7■■□□□ 1.38
IRF3-221ENST00000598808 CREB3L3Q68CJ9 461 aa23.7■■□□□ 1.38
IRF3-221ENST00000598808 SMCR8Q8TEV9 937 aaPredicted RBP23.7■■□□□ 1.38
IRF3-221ENST00000598808 ZKSCAN3Q9BRR0 538 aa23.7■■□□□ 1.38
IRF3-221ENST00000598808 MTMR4Q9NYA4 1195 aa23.7■■□□□ 1.38
IRF3-221ENST00000598808 PNMA3Q9UL41 463 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms