RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 PRKAR2AP13861 404 aaKnown RBP13□□□□□ -0.33
USE1-203ENST00000593597 USP5P45974 858 aa13□□□□□ -0.33
USE1-203ENST00000593597 USP17L2Q6R6M4 530 aa13□□□□□ -0.33
USE1-203ENST00000593597 RHPN1Q8TCX5 695 aa13□□□□□ -0.33
USE1-203ENST00000593597 PAGR1Q9BTK6 254 aa13□□□□□ -0.33
USE1-203ENST00000593597 FLRT1Q9NZU1 646 aa13□□□□□ -0.33
USE1-203ENST00000593597 STAP2Q9UGK3 403 aa13□□□□□ -0.33
USE1-203ENST00000593597 SERPINB13Q9UIV8 391 aa13□□□□□ -0.33
USE1-203ENST00000593597 ZNFX1Q9P2E3 1918 aaKnown RBP13□□□□□ -0.33
USE1-203ENST00000593597 A0A1W2PRG0 241 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 CYP2D6P10635 497 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 XRCC5P13010 732 aaKnown RBP12.99□□□□□ -0.33
USE1-203ENST00000593597 PDE6AP16499 860 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 VCAM1P19320 739 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 CCND3P30281 292 aaPredicted RBP12.99□□□□□ -0.33
USE1-203ENST00000593597 CACNB2Q08289 660 aaPredicted RBP12.99□□□□□ -0.33
USE1-203ENST00000593597 KIAA1755Q5JYT7 1200 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 LHX8Q68G74 356 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 NECAB2Q7Z6G3 386 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 C7orf61Q8IZ16 206 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 ANKLE1Q8NAG6 615 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 LRCH3Q96II8 777 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 TRIM34Q9BYJ4 488 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 HMX1Q9NP08 348 aaPredicted RBP12.99□□□□□ -0.33
USE1-203ENST00000593597 BTBD7Q9P203 1132 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 NR2E3Q9Y5X4 410 aa12.99□□□□□ -0.33
USE1-203ENST00000593597 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
USE1-203ENST00000593597 IGHA2P01877 340 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 COL6A1P12109 1028 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 MAP3K12Q12852 859 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 CATSPERGQ6ZRH7 1159 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 LCORLQ8N3X6 602 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 SLC44A5Q8NCS7 719 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 SOCS4Q8WXH5 440 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 GDF15Q99988 308 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 NUDT12Q9BQG2 462 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 KIAA1683Q9H0B3 1180 aa12.98□□□□□ -0.33
USE1-203ENST00000593597 ZMYND8Q9ULU4 1186 aaPredicted RBP12.98□□□□□ -0.33
USE1-203ENST00000593597 PLXNA1Q9UIW2 1896 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 ZNF532Q9HCE3 1301 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 APBB1O00213 710 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
USE1-203ENST00000593597 MAPK4P31152 587 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 SEPT2Q15019 361 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 ABCB5Q2M3G0 1257 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 CERKLQ49MI3 558 aaPredicted RBP12.97□□□□□ -0.33
USE1-203ENST00000593597 PLEKHH3Q7Z736 793 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 ERC1Q8IUD2 1116 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 CLEC10AQ8IUN9 316 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 SDR42E1Q8WUS8 393 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 FEZ1Q99689 392 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 APBA2Q99767 749 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 C11orf49Q9H6J7 331 aa12.97□□□□□ -0.33
USE1-203ENST00000593597 MAGEB6P1A0A0J9YX57 407 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 USP17L15C9J2P7 530 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 USP17L13C9JLJ4 530 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 USP17L11C9JVI0 530 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 USP17L18D6R9N7 530 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 USP17L22D6RA61 530 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 USP17L17D6RBQ6 530 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 USP17L19D6RCP7 530 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 USP17L20D6RJB6 530 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 GOLIM4O00461 696 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 SYN1P17600 705 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 CAPN2P17655 700 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 USP17L24Q0WX57 530 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 SLC9C2Q5TAH2 1124 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 LBX2Q6XYB7 198 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 TTC6Q86TZ1 520 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 NPLOC4Q8TAT6 608 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.96□□□□□ -0.33
USE1-203ENST00000593597 GTF3C2Q8WUA4 911 aaPredicted RBP12.96□□□□□ -0.33
USE1-203ENST00000593597 NBPF3Q9H094 633 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 RPAP3Q9H6T3 665 aaPredicted RBP12.96□□□□□ -0.33
USE1-203ENST00000593597 DCP1AQ9NPI6 582 aaPredicted RBP12.96□□□□□ -0.33
USE1-203ENST00000593597 ZBTB40Q9NUA8 1239 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 COG6Q9Y2V7 657 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 RABGAP1Q9Y3P9 1069 aa12.96□□□□□ -0.33
USE1-203ENST00000593597 A0A1W2PPC1 479 aa12.95□□□□□ -0.34
USE1-203ENST00000593597 PRKAB2O43741 272 aa12.95□□□□□ -0.34
USE1-203ENST00000593597 RGS2P41220 211 aa12.95□□□□□ -0.34
USE1-203ENST00000593597 MAP2K5Q13163 448 aa12.95□□□□□ -0.34
USE1-203ENST00000593597 GRB14Q14449 540 aa12.95□□□□□ -0.34
USE1-203ENST00000593597 CERS3Q8IU89 383 aa12.95□□□□□ -0.34
USE1-203ENST00000593597 SIAH1Q8IUQ4 282 aa12.95□□□□□ -0.34
USE1-203ENST00000593597 TRPV1Q8NER1 839 aa12.95□□□□□ -0.34
USE1-203ENST00000593597 DYNLL2Q96FJ2 89 aa12.95□□□□□ -0.34
USE1-203ENST00000593597 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
USE1-203ENST00000593597 A0A0C4DFX4 3053 aa12.94□□□□□ -0.34
USE1-203ENST00000593597 CYP2D7A0A087X1C5 515 aa12.94□□□□□ -0.34
USE1-203ENST00000593597 PTPREP23469 700 aa12.94□□□□□ -0.34
USE1-203ENST00000593597 MAGEA10P43363 369 aaPredicted RBP12.94□□□□□ -0.34
USE1-203ENST00000593597 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
USE1-203ENST00000593597 LRRC26Q2I0M4 334 aa12.94□□□□□ -0.34
USE1-203ENST00000593597 TMED8Q6PL24 325 aaPredicted RBP12.94□□□□□ -0.34
USE1-203ENST00000593597 KIF1BPQ96EK5 621 aa12.94□□□□□ -0.34
USE1-203ENST00000593597 ARMT1Q9H993 441 aa12.94□□□□□ -0.34
USE1-203ENST00000593597 MCM9Q9NXL9 1143 aa12.94□□□□□ -0.34
USE1-203ENST00000593597 SMCHD1A6NHR9 2005 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms