RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 RESTQ13127 1097 aa17.11■□□□□ 0.33
SYMPK-202ENST00000593504 PDIA6Q15084 440 aa17.11■□□□□ 0.33
SYMPK-202ENST00000593504 TRMT44Q8IYL2 757 aaKnown RBP17.11■□□□□ 0.33
SYMPK-202ENST00000593504 GPKOWQ92917 476 aaPredicted RBP eCLIP17.11■□□□□ 0.33
SYMPK-202ENST00000593504 BLZF1Q9H2G9 400 aa17.11■□□□□ 0.33
SYMPK-202ENST00000593504 DNAJC5Q9H3Z4 198 aa17.11■□□□□ 0.33
SYMPK-202ENST00000593504 KLRF2D3W0D1 207 aa17.11■□□□□ 0.33
SYMPK-202ENST00000593504 IMPACTQ9P2X3 320 aa17.11■□□□□ 0.33
SYMPK-202ENST00000593504 KRT83P78385 493 aa17.11■□□□□ 0.33
SYMPK-202ENST00000593504 CNNM4Q6P4Q7 775 aa17.11■□□□□ 0.33
SYMPK-202ENST00000593504 CCDC42Q96M95 316 aa17.11■□□□□ 0.33
SYMPK-202ENST00000593504 BIN2Q9UBW5 565 aaPredicted RBP17.11■□□□□ 0.33
SYMPK-202ENST00000593504 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.11■□□□□ 0.339e-6■■□□□ 14.3
SYMPK-202ENST00000593504 V9GYY5 206 aaPredicted RBP17.11■□□□□ 0.33
SYMPK-202ENST00000593504 KIF23Q02241 960 aaPredicted RBP17.1■□□□□ 0.33
SYMPK-202ENST00000593504 SLC39A14Q15043 492 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 C2CD5Q86YS7 1000 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 BICD1Q96G01 975 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 PPIP5K2O43314 1243 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 ZYXQ15942 572 aaKnown RBP17.1■□□□□ 0.33
SYMPK-202ENST00000593504 CALCRLQ16602 461 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 CABP7Q86V35 215 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 NEK11Q8NG66 645 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 POLR3EQ9NVU0 708 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 REREQ9P2R6 1566 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 PPEF1O14829 653 aaPredicted RBP17.1■□□□□ 0.33
SYMPK-202ENST00000593504 KRT13P13646 458 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 SNX29Q8TEQ0 813 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 RNF26Q9BY78 433 aaPredicted RBP17.1■□□□□ 0.33
SYMPK-202ENST00000593504 XPO4Q9C0E2 1151 aaKnown RBP17.1■□□□□ 0.33
SYMPK-202ENST00000593504 RCOR1Q9UKL0 485 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 MRVI1Q9Y6F6 885 aa17.1■□□□□ 0.33
SYMPK-202ENST00000593504 KRBA2Q6ZNG9 492 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 OVOS2A0A0G2JMS6 1433 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 FRMPD2Q68DX3 1309 aaPredicted RBP17.09■□□□□ 0.33
SYMPK-202ENST00000593504 CYP2D7A0A087X1C5 515 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 KIAA0825Q8IV33 1275 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 DRC1Q96MC2 740 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 CTAGE9A4FU28 777 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 H0YHG0 523 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 ARID5AQ03989 594 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 PLS1Q14651 629 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 CCDC174Q6PII3 467 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 SEPT12Q8IYM1 358 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 CSGALNACT2Q8N6G5 542 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 NOC4LQ9BVI4 516 aaKnown RBP17.09■□□□□ 0.33
SYMPK-202ENST00000593504 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 TRAF5O00463 557 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 MECOMQ03112 1051 aa17.09■□□□□ 0.33
SYMPK-202ENST00000593504 LRRC47Q8N1G4 583 aaKnown RBP17.09■□□□□ 0.33
SYMPK-202ENST00000593504 SRRTQ9BXP5 876 aaKnown RBP17.09■□□□□ 0.33
SYMPK-202ENST00000593504 BBOX1O75936 387 aa17.08■□□□□ 0.33
SYMPK-202ENST00000593504 FOXP1Q9H334 677 aaPredicted RBP17.08■□□□□ 0.33
SYMPK-202ENST00000593504 GJA3Q9Y6H8 435 aa17.08■□□□□ 0.33
SYMPK-202ENST00000593504 CTAGE15A4D2H0 777 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 KRT86O43790 486 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 CTAGE8P0CG41 777 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 TBC1D8BQ0IIM8 1120 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 INF2Q27J81 1249 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 USH1GQ495M9 461 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 CTAGE6Q86UF2 777 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 CTAGE4Q8IX94 777 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.08■□□□□ 0.32
SYMPK-202ENST00000593504 NARFQ9UHQ1 456 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 GUCA1BQ9UMX6 200 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 CCDC172P0C7W6 258 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 LIFRP42702 1097 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 KIF5AQ12840 1032 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 GRAPQ13588 217 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 HAUS3Q68CZ6 603 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 GRAPLQ8TC17 118 aaPredicted RBP17.08■□□□□ 0.32
SYMPK-202ENST00000593504 TBC1D5Q92609 795 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 ZBTB21Q9ULJ3 1066 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 KCNQ2O43526 872 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 HS2ST1Q7LGA3 356 aa17.08■□□□□ 0.32
SYMPK-202ENST00000593504 FER1L4A9Z1Z3 1794 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 IFNAR1P17181 557 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 CETN2P41208 172 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 ZNF569Q5MCW4 686 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 LINC00301Q8NCQ3 95 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 UIMC1Q96RL1 719 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 PKD2L1Q9P0L9 805 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 DLGAP5Q15398 846 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 KRT27Q7Z3Y8 459 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 TBC1D10CQ8IV04 446 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 CNKSR2Q8WXI2 1034 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 NAA15Q9BXJ9 866 aaKnown RBP17.07■□□□□ 0.32
SYMPK-202ENST00000593504 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
SYMPK-202ENST00000593504 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 PPP6R2O75170 966 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 TACC1O75410 805 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 NELFBQ8WX92 580 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 CHMP2AO43633 222 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
SYMPK-202ENST00000593504 CKAP4Q07065 602 aaKnown RBP17.07■□□□□ 0.32
SYMPK-202ENST00000593504 AIFM3Q96NN9 605 aa17.07■□□□□ 0.32
SYMPK-202ENST00000593504 SOS2Q07890 1332 aaPredicted RBP17.07■□□□□ 0.32
SYMPK-202ENST00000593504 SCARF1Q14162 830 aa17.06■□□□□ 0.32
SYMPK-202ENST00000593504 IFI16Q16666 785 aaKnown RBP17.06■□□□□ 0.32
SYMPK-202ENST00000593504 DYMQ7RTS9 669 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms