RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 SHMT1P34896 483 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 ADD2P35612 726 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 USP17L24Q0WX57 530 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 DEFB118Q96PH6 123 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 TXNRD2Q9NNW7 524 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 DCP1AQ9NPI6 582 aaPredicted RBP19.49■□□□□ 0.71
CIRBP-241ENST00000593048 TRIOBPQ9H2D6 2365 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 PEX10O60683 326 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 MAPK4P31152 587 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 ERICH6BQ5W0A0 696 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 ZSCAN25Q6NSZ9 544 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 AMOTL1Q8IY63 956 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 C12orf42Q96LP6 360 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 NUDT12Q9BQG2 462 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 HTATIP2Q9BUP3 242 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 RBPJLQ9UBG7 517 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 GJD2Q9UKL4 321 aa19.48■□□□□ 0.71
CIRBP-241ENST00000593048 FARP2O94887 1054 aaPredicted RBP19.47■□□□□ 0.71
CIRBP-241ENST00000593048 MBD4O95243 580 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 HMGCRP04035 888 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 CAPN2P17655 700 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 CYP2B6P20813 491 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 ERVK-9P63128 1117 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 ERVK-24P63145 666 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 GABPAQ06546 454 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 SLFNL1Q499Z3 407 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 ACER1Q8TDN7 264 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 DDRGK1Q96HY6 314 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 KIAA1683Q9H0B3 1180 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 ATP8A2Q9NTI2 1148 aa19.47■□□□□ 0.71
CIRBP-241ENST00000593048 NEFLP07196 543 aa19.46■□□□□ 0.71
CIRBP-241ENST00000593048 SEPT2Q15019 361 aa19.46■□□□□ 0.71
CIRBP-241ENST00000593048 Q3C1V9 767 aa19.46■□□□□ 0.71
CIRBP-241ENST00000593048 GPATCH3Q96I76 525 aa19.46■□□□□ 0.71
CIRBP-241ENST00000593048 SWAP70Q9UH65 585 aa19.46■□□□□ 0.71
CIRBP-241ENST00000593048 COLQQ9Y215 455 aaPredicted RBP19.46■□□□□ 0.71
CIRBP-241ENST00000593048 PRKAB2O43741 272 aa19.45■□□□□ 0.7
CIRBP-241ENST00000593048 CYP2D6P10635 497 aa19.45■□□□□ 0.7
CIRBP-241ENST00000593048 VCAM1P19320 739 aa19.45■□□□□ 0.7
CIRBP-241ENST00000593048 CCNA1P78396 465 aa19.45■□□□□ 0.7
CIRBP-241ENST00000593048 UBE3CQ15386 1083 aa19.45■□□□□ 0.7
CIRBP-241ENST00000593048 CATSPERGQ6ZRH7 1159 aa19.45■□□□□ 0.7
CIRBP-241ENST00000593048 SOCS4Q8WXH5 440 aa19.45■□□□□ 0.7
CIRBP-241ENST00000593048 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.45■□□□□ 0.74e-7■■■■□ 22.1
CIRBP-241ENST00000593048 HMX1Q9NP08 348 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-241ENST00000593048 PAK6Q9NQU5 681 aaPredicted RBP19.45■□□□□ 0.7
CIRBP-241ENST00000593048 ECHDC1Q9NTX5 307 aa19.45■□□□□ 0.7
CIRBP-241ENST00000593048 H0YGN5 161 aa19.44■□□□□ 0.7
CIRBP-241ENST00000593048 GUCY1A2P33402 732 aa19.44■□□□□ 0.7
CIRBP-241ENST00000593048 EVX2Q03828 476 aa19.44■□□□□ 0.7
CIRBP-241ENST00000593048 WDR78Q5VTH9 848 aa19.44■□□□□ 0.7
CIRBP-241ENST00000593048 PLEKHH3Q7Z736 793 aa19.44■□□□□ 0.7
CIRBP-241ENST00000593048 DYNLL2Q96FJ2 89 aa19.44■□□□□ 0.7
CIRBP-241ENST00000593048 RPAP3Q9H6T3 665 aaPredicted RBP19.44■□□□□ 0.7
CIRBP-241ENST00000593048 RABGAP1Q9Y3P9 1069 aa19.44■□□□□ 0.7
CIRBP-241ENST00000593048 RPTORQ8N122 1335 aa19.44■□□□□ 0.7
CIRBP-241ENST00000593048 TMEM179Q6ZVK1 233 aa19.43■□□□□ 0.7
CIRBP-241ENST00000593048 GPR142Q7Z601 462 aa19.43■□□□□ 0.7
CIRBP-241ENST00000593048 UBE2Q1Q7Z7E8 422 aa19.43■□□□□ 0.7
CIRBP-241ENST00000593048 SLC44A5Q8NCS7 719 aa19.43■□□□□ 0.7
CIRBP-241ENST00000593048 PORCNQ9H237 461 aa19.43■□□□□ 0.7
CIRBP-241ENST00000593048 DCTPP1Q9H773 170 aa19.43■□□□□ 0.7
CIRBP-241ENST00000593048 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
CIRBP-241ENST00000593048 NAV1Q8NEY1 1877 aa19.42■□□□□ 0.7
CIRBP-241ENST00000593048 GLRX3O76003 335 aaKnown RBP19.42■□□□□ 0.7
CIRBP-241ENST00000593048 CHGBP05060 677 aa19.42■□□□□ 0.7
CIRBP-241ENST00000593048 XRCC5P13010 732 aaKnown RBP19.42■□□□□ 0.7
CIRBP-241ENST00000593048 RGS2P41220 211 aa19.42■□□□□ 0.7
CIRBP-241ENST00000593048 TRIM32Q13049 653 aa19.42■□□□□ 0.7
CIRBP-241ENST00000593048 TRMT44Q8IYL2 757 aaKnown RBP19.42■□□□□ 0.7
CIRBP-241ENST00000593048 TRIB2Q92519 343 aa19.42■□□□□ 0.7
CIRBP-241ENST00000593048 USP17L12C9JPN9 530 aa19.41■□□□□ 0.7
CIRBP-241ENST00000593048 USP17L21D6R901 530 aa19.41■□□□□ 0.7
CIRBP-241ENST00000593048 ZKSCAN1P17029 563 aaPredicted RBP19.41■□□□□ 0.7
CIRBP-241ENST00000593048 TANGO6Q9C0B7 1094 aa19.41■□□□□ 0.7
CIRBP-241ENST00000593048 PUS7LQ9H0K6 701 aaKnown RBP19.41■□□□□ 0.7
CIRBP-241ENST00000593048 ARHGEF10LQ9HCE6 1279 aa19.41■□□□□ 0.7
CIRBP-241ENST00000593048 NR2E3Q9Y5X4 410 aa19.41■□□□□ 0.7
CIRBP-241ENST00000593048 SZT2Q5T011 3432 aa19.41■□□□□ 0.7
CIRBP-241ENST00000593048 CYP2D7A0A087X1C5 515 aa19.4■□□□□ 0.7
CIRBP-241ENST00000593048 A0A1W2PRG0 241 aa19.4■□□□□ 0.7
CIRBP-241ENST00000593048 PRKAR2AP13861 404 aaKnown RBP19.4■□□□□ 0.7
CIRBP-241ENST00000593048 C12orf60Q5U649 245 aa19.4■□□□□ 0.7
CIRBP-241ENST00000593048 POTEEQ6S8J3 1075 aa19.4■□□□□ 0.7
CIRBP-241ENST00000593048 CRISPLD2Q9H0B8 497 aa19.4■□□□□ 0.7
CIRBP-241ENST00000593048 SH2D4AQ9H788 454 aa19.4■□□□□ 0.7
CIRBP-241ENST00000593048 HOXC10Q9NYD6 342 aa19.4■□□□□ 0.7
CIRBP-241ENST00000593048 IVNS1ABPQ9Y6Y0 642 aa19.4■□□□□ 0.7
CIRBP-241ENST00000593048 DOCK3Q8IZD9 2030 aa19.4■□□□□ 0.7
CIRBP-241ENST00000593048 CNMDO75829 334 aa19.39■□□□□ 0.69
CIRBP-241ENST00000593048 AKR1B1P15121 316 aa19.39■□□□□ 0.69
CIRBP-241ENST00000593048 CDK8P49336 464 aa19.39■□□□□ 0.69
CIRBP-241ENST00000593048 ICA1Q05084 483 aa19.39■□□□□ 0.69
CIRBP-241ENST00000593048 COG2Q14746 738 aa19.39■□□□□ 0.69
CIRBP-241ENST00000593048 MORN1Q5T089 497 aa19.39■□□□□ 0.69
CIRBP-241ENST00000593048 LBX2Q6XYB7 198 aa19.39■□□□□ 0.69
CIRBP-241ENST00000593048 NECAB2Q7Z6G3 386 aa19.39■□□□□ 0.69
CIRBP-241ENST00000593048 PAWRQ96IZ0 340 aaKnown RBP19.39■□□□□ 0.69
CIRBP-241ENST00000593048 CCDC17Q96LX7 622 aa19.39■□□□□ 0.69
CIRBP-241ENST00000593048 RANBP2P49792 3224 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms