RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 RUFY4Q6ZNE9 571 aa5.54□□□□□ -1.52
VMP1-212ENST00000591782 LSRQ86X29 649 aaPredicted RBP5.54□□□□□ -1.52
VMP1-212ENST00000591782 VPS37DQ86XT2 251 aa5.54□□□□□ -1.52
VMP1-212ENST00000591782 RBBP8NLQ8NC74 664 aaPredicted RBP5.54□□□□□ -1.52
VMP1-212ENST00000591782 CPLX3Q8WVH0 158 aa5.54□□□□□ -1.52
VMP1-212ENST00000591782 SRRTQ9BXP5 876 aaKnown RBP5.54□□□□□ -1.52
VMP1-212ENST00000591782 ZC3H7BQ9UGR2 993 aaKnown RBP5.54□□□□□ -1.52
VMP1-212ENST00000591782 GTF2IRD1Q9UHL9 959 aa5.54□□□□□ -1.52
VMP1-212ENST00000591782 CEP131Q9UPN4 1083 aa5.54□□□□□ -1.52
VMP1-212ENST00000591782 PRR33A8MZF0 331 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 TNFRSF10CO14798 259 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 RGS13O14921 159 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 UBOX5O94941 541 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 MED26O95402 600 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 FGRP09769 529 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 GBP1P32455 592 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 GRIK1P39086 918 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 ETV3P41162 512 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 GIPRP48546 466 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 OXCT1P55809 520 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 EIF6P56537 245 aaKnown RBP5.53□□□□□ -1.52
VMP1-212ENST00000591782 ARID5AQ03989 594 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 SFRP5Q5T4F7 317 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 ZNF746Q6NUN9 644 aaPredicted RBP5.53□□□□□ -1.52
VMP1-212ENST00000591782 ARHGAP27Q6ZUM4 889 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 PLD6Q8N2A8 252 aaKnown RBP5.53□□□□□ -1.52
VMP1-212ENST00000591782 SLC43A3Q8NBI5 491 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 SHDQ96IW2 340 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 CRBNQ96SW2 442 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 MAPK8IP1Q9UQF2 711 aa5.53□□□□□ -1.52
VMP1-212ENST00000591782 FAM86C2PA6NEL3 165 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 IGF2BP3O00425 579 aaKnown RBP eCLIP5.52□□□□□ -1.53
VMP1-212ENST00000591782 COBLO75128 1261 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 CBX7O95931 251 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 CEACAM5P06731 702 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 ACRP10323 421 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 ITIH2P19823 946 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 SSTR4P31391 388 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 CD97P48960 835 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 MSMPQ1L6U9 139 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 C8orf37Q96NL8 207 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 SLC9A7Q96T83 725 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 TM9SF2Q99805 663 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.52□□□□□ -1.533e-25■□□□□ 8.3
VMP1-212ENST00000591782 STRIP2Q9ULQ0 834 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 MRVI1Q9Y6F6 885 aa5.52□□□□□ -1.53
VMP1-212ENST00000591782 COL17A1Q9UMD9 1497 aaPredicted RBP5.51□□□□□ -1.53
VMP1-212ENST00000591782 GNAT3A8MTJ3 354 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 SSBP05455 408 aaKnown RBP eCLIP5.51□□□□□ -1.53
VMP1-212ENST00000591782 ZNF865P0CJ78 1059 aaPredicted RBP5.51□□□□□ -1.53
VMP1-212ENST00000591782 CYP7A1P22680 504 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 GUCY2CP25092 1073 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 INTS5Q6P9B9 1019 aaKnown RBP5.51□□□□□ -1.53
VMP1-212ENST00000591782 MCF2L2Q86YR7 1114 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 ANAPC16Q96DE5 110 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 KREMEN1Q96MU8 473 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 GMLQ99445 158 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 MKNK2Q9HBH9 465 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 PLAGL2Q9UPG8 496 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 CAPN6Q9Y6Q1 641 aa5.51□□□□□ -1.53
VMP1-212ENST00000591782 ZYXQ15942 572 aaKnown RBP5.5□□□□□ -1.53
VMP1-212ENST00000591782 NKPD1Q17RQ9 610 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 INTS3Q68E01 1043 aaKnown RBP5.5□□□□□ -1.53
VMP1-212ENST00000591782 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 SPACA3Q8IXA5 215 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 TMEM192Q8IY95 271 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 MFSD4AQ8N468 514 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 TAB3Q8N5C8 712 aaPredicted RBP5.5□□□□□ -1.53
VMP1-212ENST00000591782 FAM169BQ8N8A8 192 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 OR6P1Q8NGX9 317 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 NETO1Q8TDF5 533 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 RNF141Q8WVD5 230 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 COX4I2Q96KJ9 171 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 Q96M66 194 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 SLC6A18Q96N87 628 aa5.5□□□□□ -1.53
VMP1-212ENST00000591782 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.5□□□□□ -1.53
VMP1-212ENST00000591782 KIAA1324LA8MWY0 1029 aaPredicted RBP5.49□□□□□ -1.53
VMP1-212ENST00000591782 LRRN2O75325 713 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 CLEC3AO75596 197 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 SPINK2P20155 84 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 CCNFP41002 786 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 KIR3DL1P43629 444 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 CHMP4BP1P59074 171 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 TNK2Q07912 1038 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 PPP2R5EQ16537 467 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 IFI16Q16666 785 aaKnown RBP5.49□□□□□ -1.53
VMP1-212ENST00000591782 UNC5AQ6ZN44 842 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 DTX1Q86Y01 620 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 VWCEQ96DN2 955 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 ZNF512BQ96KM6 892 aaPredicted RBP5.49□□□□□ -1.53
VMP1-212ENST00000591782 ASPNQ9BXN1 380 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 TNKS2Q9H2K2 1166 aa5.49□□□□□ -1.53
VMP1-212ENST00000591782 SCO2A0A1W2PP80 73 aa5.48□□□□□ -1.53
VMP1-212ENST00000591782 FAM155AB1AL88 458 aaPredicted RBP5.48□□□□□ -1.53
VMP1-212ENST00000591782 ETFBP38117 255 aa5.48□□□□□ -1.53
VMP1-212ENST00000591782 LRP8Q14114 963 aa5.48□□□□□ -1.53
VMP1-212ENST00000591782 CDKAL1Q5VV42 579 aa5.48□□□□□ -1.53
VMP1-212ENST00000591782 TTC6Q86TZ1 520 aa5.48□□□□□ -1.53
VMP1-212ENST00000591782 DTWD2Q8NBA8 298 aa5.48□□□□□ -1.53
VMP1-212ENST00000591782 ZNF408Q9H9D4 720 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms