RNA–Protein interactions for RNA: ENST00000588720.1

BCAS3-220, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

Gene BCAS3, Length 4,556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-220ENST00000588720 SH2D4AQ9H788 454 aa12.98□□□□□ -0.33
BCAS3-220ENST00000588720 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 NT5C2P49902 561 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 HSP90AA4PQ58FG1 418 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 UBA5Q9GZZ9 404 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 PCDHA7Q9UN72 937 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 CMA1P23946 247 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 NONOQ15233 471 aaKnown RBP eCLIP12.97□□□□□ -0.33
BCAS3-220ENST00000588720 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 ZNF609O15014 1411 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 GOLGA6L9A6NEM1 432 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 FMNL1O95466 1100 aaPredicted RBP12.97□□□□□ -0.33
BCAS3-220ENST00000588720 SLC1A4P43007 532 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 TCP10Q12799 353 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 CT47A1Q5JQC4 288 aaPredicted RBP12.97□□□□□ -0.33
BCAS3-220ENST00000588720 IL25Q9H293 177 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 RASSF4Q9H2L5 321 aa12.97□□□□□ -0.33
BCAS3-220ENST00000588720 A0A1W2PQ27 194 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 A0A1W2PQ64 194 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 A0A1W2PQD8 194 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 ERLIN2O94905 339 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 TUBBP07437 444 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 SCG2P13521 617 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 CACNA2D4Q7Z3S7 1137 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.96□□□□□ -0.33
BCAS3-220ENST00000588720 STAG1Q8WVM7 1258 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 GPHNQ9NQX3 736 aaPredicted RBP12.96□□□□□ -0.33
BCAS3-220ENST00000588720 IFNKQ9P0W0 207 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 RCOR1Q9UKL0 485 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 NTSR2O95665 410 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 SPECC1Q5M775 1068 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 RBM26Q5T8P6 1007 aaKnown RBP12.96□□□□□ -0.33
BCAS3-220ENST00000588720 TMEM87AQ8NBN3 555 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 LINC00116Q8NCU8 138 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 POLR3EQ9NVU0 708 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 MYRIPQ8NFW9 859 aa12.96□□□□□ -0.33
BCAS3-220ENST00000588720 IGSF3O75054 1194 aa12.96□□□□□ -0.34
BCAS3-220ENST00000588720 PFKFB1P16118 471 aa12.96□□□□□ -0.34
BCAS3-220ENST00000588720 RESTQ13127 1097 aa12.96□□□□□ -0.34
BCAS3-220ENST00000588720 SPA17Q15506 151 aa12.96□□□□□ -0.34
BCAS3-220ENST00000588720 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.34
BCAS3-220ENST00000588720 CEP135Q66GS9 1140 aa12.96□□□□□ -0.34
BCAS3-220ENST00000588720 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.34
BCAS3-220ENST00000588720 KIAA0825Q8IV33 1275 aa12.96□□□□□ -0.34
BCAS3-220ENST00000588720 ARHGEF10LQ9HCE6 1279 aa12.96□□□□□ -0.34
BCAS3-220ENST00000588720 KIF5CO60282 957 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 ZNF500O60304 480 aaPredicted RBP12.95□□□□□ -0.34
BCAS3-220ENST00000588720 NPR1P16066 1061 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 SCNN1DP51172 638 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 NLRP12P59046 1061 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 NFIXQ14938 502 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 CCDC40Q4G0X9 1142 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 MB21D2Q8IYB1 491 aaPredicted RBP12.95□□□□□ -0.34
BCAS3-220ENST00000588720 MLKLQ8NB16 471 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 MTA3Q9BTC8 594 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 FOXP1Q9H334 677 aaPredicted RBP12.95□□□□□ -0.34
BCAS3-220ENST00000588720 KIAA1468Q9P260 1216 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 CNTNAP4Q9C0A0 1308 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 NFAT5O94916 1531 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 SETSIPP0DME0 302 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 SLC39A14Q15043 492 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 INTS5Q6P9B9 1019 aaKnown RBP12.95□□□□□ -0.34
BCAS3-220ENST00000588720 STXBP4Q6ZWJ1 553 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 ZDHHC9Q9Y397 364 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.95□□□□□ -0.34
BCAS3-220ENST00000588720 KLRF2D3W0D1 207 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
BCAS3-220ENST00000588720 SRRTQ9BXP5 876 aaKnown RBP12.95□□□□□ -0.34
BCAS3-220ENST00000588720 CLIC4Q9Y696 253 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 XRN1Q8IZH2 1706 aaKnown RBP12.95□□□□□ -0.34
BCAS3-220ENST00000588720 PTGS1P23219 599 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 PRDX5P30044 214 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 ADCY7P51828 1080 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 DLGAP5Q15398 846 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 WWC2Q6AWC2 1192 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 BLIDQ8IZY5 108 aa12.95□□□□□ -0.34
BCAS3-220ENST00000588720 FAM84BQ96KN1 310 aaPredicted RBP12.95□□□□□ -0.34
BCAS3-220ENST00000588720 CCNT1O60563 726 aaKnown RBP12.94□□□□□ -0.34
BCAS3-220ENST00000588720 TBCAO75347 108 aaKnown RBP12.94□□□□□ -0.34
BCAS3-220ENST00000588720 CASP7P55210 303 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 STX17P56962 302 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 DIXDC1Q155Q3 683 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 GALNT17Q6IS24 598 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 REXO1Q8N1G1 1221 aaKnown RBP12.94□□□□□ -0.34
BCAS3-220ENST00000588720 GPATCH11Q8N954 259 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 NWD1Q149M9 1564 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 MMP10P09238 476 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.34
BCAS3-220ENST00000588720 POSTNQ15063 836 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 SNW1Q13573 536 aaKnown RBP12.94□□□□□ -0.34
BCAS3-220ENST00000588720 NIM1KQ8IY84 436 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 SAMM50Q9Y512 469 aa12.94□□□□□ -0.34
BCAS3-220ENST00000588720 CYP2D7A0A087X1C5 515 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 BICDL2A1A5D9 508 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 BCL9O00512 1426 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 SLIT3O75094 1523 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 NF2P35240 595 aa12.93□□□□□ -0.34
BCAS3-220ENST00000588720 RBM6P78332 1123 aaKnown RBP12.93□□□□□ -0.34
BCAS3-220ENST00000588720 PNPLA7Q6ZV29 1317 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms