RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 NT5C2P49902 561 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 HMGCS2P54868 508 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 SEPT2Q15019 361 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 RRP12Q5JTH9 1297 aaKnown RBP14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 MFSD6Q6ZSS7 791 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 PROCA1Q8NCQ7 364 aaPredicted RBP14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 IL25Q9H293 177 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 KANSL2Q9H9L4 492 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 PNMA3Q9UL41 463 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 PLIN4Q96Q06 1357 aa14.07□□□□□ -0.16
SDHDP1-201ENST00000588055 SMIM22K7EJ46 135 aa14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 RANBP6O60518 1105 aaKnown RBP14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 TRPA1O75762 1119 aa14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 CTCFP49711 727 aaPredicted RBP14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 BACE1P56817 501 aa14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 ATP2B2Q01814 1243 aa14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 TAF1CQ15572 869 aaPredicted RBP14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 SHROOM1Q2M3G4 852 aaPredicted RBP14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 AKNAD1Q5T1N1 836 aa14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 USP17L2Q6R6M4 530 aa14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 ANKRD23Q86SG2 305 aa14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 STAG1Q8WVM7 1258 aa14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 PARK7Q99497 189 aaKnown RBP14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 RNF186Q9NXI6 227 aa14.06□□□□□ -0.16
SDHDP1-201ENST00000588055 GREB1LQ9C091 1923 aaPredicted RBP14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 BTBD19C9JJ37 291 aa14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 IGF2BP3O00425 579 aaKnown RBP eCLIP14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 ORC4O43929 436 aa14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 JAG1P78504 1218 aa14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 TRDNQ13061 729 aa14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 ZYXQ15942 572 aaKnown RBP14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 ESR2Q92731 530 aa14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 CNNM2Q9H8M5 875 aa14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 ZFYVE28Q9HCC9 887 aa14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 GOPCQ9HD26 462 aa14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 AGTPBP1Q9UPW5 1226 aa14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
SDHDP1-201ENST00000588055 PDHXO00330 501 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 RAD21O60216 631 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 EIF5BO60841 1220 aaKnown RBP14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 REC8O95072 547 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 TFAP4Q01664 338 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 RNF20Q5VTR2 975 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 TBC1D10CQ8IV04 446 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 FAM43AQ8N2R8 423 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 SMCR8Q8TEV9 937 aaPredicted RBP14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 KRT23Q9C075 422 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 KIAA1683Q9H0B3 1180 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 SLC45A1Q9Y2W3 748 aa14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 RBM8AQ9Y5S9 174 aaKnown RBP14.04□□□□□ -0.16
SDHDP1-201ENST00000588055 FOXN1O15353 648 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 TTLL1O95922 423 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 OSBPP22059 807 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 GUCY1A2P33402 732 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 IRX3P78415 501 aaPredicted RBP14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 PTH1RQ03431 593 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 SH3D19Q5HYK7 790 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 FAM47AQ5JRC9 791 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 RALYLQ86SE5 291 aaKnown RBP14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 IQCA1Q86XH1 822 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 NEDD1Q8NHV4 660 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 LPAR1Q92633 364 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 PTPN18Q99952 460 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 TSKSQ9UJT2 592 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 NEDD4P46934 1319 aa14.03□□□□□ -0.16
SDHDP1-201ENST00000588055 MYH4Q9Y623 1939 aa14.02□□□□□ -0.16
SDHDP1-201ENST00000588055 EEF2P13639 858 aaKnown RBP14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 CRHR2Q13324 411 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 CLEC10AQ8IUN9 316 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 ACER1Q8TDN7 264 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 MAP4K1Q92918 833 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 CEP95Q96GE4 821 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 C12orf42Q96LP6 360 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 CFHR5Q9BXR6 569 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 LSG1Q9H089 658 aaKnown RBP14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 NYAP2Q9P242 653 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 SYNPO2Q9UMS6 1093 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 STX8Q9UNK0 236 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 GTF3C3Q9Y5Q9 886 aa14.02□□□□□ -0.17
SDHDP1-201ENST00000588055 TBC1D8O95759 1140 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 FGRP09769 529 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 HSPA8P11142 646 aaKnown RBP14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 VCAM1P19320 739 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 MOGSQ13724 837 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 CCDC178Q5BJE1 867 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 TREML2Q5T2D2 321 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 UBAC1Q9BSL1 405 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 TANGO6Q9C0B7 1094 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 NBPF3Q9H094 633 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 VCPKMTQ9H867 229 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 MTMR4Q9NYA4 1195 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 TMX2Q9Y320 296 aa14.01□□□□□ -0.17
SDHDP1-201ENST00000588055 CYP21A2P08686 494 aa14□□□□□ -0.17
SDHDP1-201ENST00000588055 ZKSCAN1P17029 563 aaPredicted RBP14□□□□□ -0.17
SDHDP1-201ENST00000588055 SART3Q15020 963 aaKnown RBP14□□□□□ -0.17
SDHDP1-201ENST00000588055 GPAT2Q6NUI2 795 aa14□□□□□ -0.17
SDHDP1-201ENST00000588055 GTF3C2Q8WUA4 911 aaPredicted RBP14□□□□□ -0.17
SDHDP1-201ENST00000588055 CLIP2Q9UDT6 1046 aa14□□□□□ -0.17
SDHDP1-201ENST00000588055 ISY1Q9ULR0 285 aaKnown RBP14□□□□□ -0.17
SDHDP1-201ENST00000588055 IGKV6D-41A0A0C4DH26 115 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms