RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
DNMT1-213ENST00000587604 RABGAP1Q9Y3P9 1069 aa17.13■□□□□ 0.33
DNMT1-213ENST00000587604 RLBP1P12271 317 aa17.12■□□□□ 0.33
DNMT1-213ENST00000587604 USP14P54578 494 aa17.12■□□□□ 0.33
DNMT1-213ENST00000587604 LRCH3Q96II8 777 aa17.12■□□□□ 0.33
DNMT1-213ENST00000587604 FEZ1Q99689 392 aa17.12■□□□□ 0.33
DNMT1-213ENST00000587604 COL6A3P12111 3177 aa17.12■□□□□ 0.33
DNMT1-213ENST00000587604 GLRX3O76003 335 aaKnown RBP17.11■□□□□ 0.33
DNMT1-213ENST00000587604 CCNA1P78396 465 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 RAB3GAP1Q15042 981 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 ZYXQ15942 572 aaKnown RBP17.11■□□□□ 0.33
DNMT1-213ENST00000587604 CCL14Q16627 93 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 ABCB5Q2M3G0 1257 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 CERKLQ49MI3 558 aaPredicted RBP17.11■□□□□ 0.33
DNMT1-213ENST00000587604 LHX8Q68G74 356 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 CATSPERGQ6ZRH7 1159 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 ERC1Q8IUD2 1116 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 APBA2Q99767 749 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 KIAA1683Q9H0B3 1180 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 ANTXR1Q9H6X2 564 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 NDUFB9Q9Y6M9 179 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 PFASO15067 1338 aa17.11■□□□□ 0.33
DNMT1-213ENST00000587604 CNMDO75829 334 aa17.1■□□□□ 0.33
DNMT1-213ENST00000587604 COL6A1P12109 1028 aa17.1■□□□□ 0.33
DNMT1-213ENST00000587604 SYN1P17600 705 aa17.1■□□□□ 0.33
DNMT1-213ENST00000587604 CCND3P30281 292 aaPredicted RBP17.1■□□□□ 0.33
DNMT1-213ENST00000587604 MAP2K5Q13163 448 aa17.1■□□□□ 0.33
DNMT1-213ENST00000587604 GPR153Q6NV75 609 aa17.1■□□□□ 0.33
DNMT1-213ENST00000587604 CEP85Q6P2H3 762 aa17.1■□□□□ 0.33
DNMT1-213ENST00000587604 EDC3Q96F86 508 aaKnown RBP17.1■□□□□ 0.33
DNMT1-213ENST00000587604 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
DNMT1-213ENST00000587604 CABP5Q9NP86 173 aa17.1■□□□□ 0.33
DNMT1-213ENST00000587604 VCAM1P19320 739 aa17.09■□□□□ 0.33
DNMT1-213ENST00000587604 MAGEA10P43363 369 aaPredicted RBP17.09■□□□□ 0.33
DNMT1-213ENST00000587604 PLCD1P51178 756 aa17.09■□□□□ 0.33
DNMT1-213ENST00000587604 LBX2Q6XYB7 198 aa17.09■□□□□ 0.33
DNMT1-213ENST00000587604 AACSQ86V21 672 aa17.09■□□□□ 0.33
DNMT1-213ENST00000587604 ACER1Q8TDN7 264 aa17.09■□□□□ 0.33
DNMT1-213ENST00000587604 RIOK1Q9BRS2 568 aaKnown RBP17.09■□□□□ 0.33
DNMT1-213ENST00000587604 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
DNMT1-213ENST00000587604 SLC15A5A6NIM6 579 aa17.08■□□□□ 0.32
DNMT1-213ENST00000587604 SHMT1P34896 483 aa17.08■□□□□ 0.32
DNMT1-213ENST00000587604 TTF1Q15361 905 aaPredicted RBP17.08■□□□□ 0.32
DNMT1-213ENST00000587604 LRIT3Q3SXY7 679 aa17.08■□□□□ 0.32
DNMT1-213ENST00000587604 A0A0C4DFX4 3053 aa17.07■□□□□ 0.32
DNMT1-213ENST00000587604 MAGEB6P1A0A0J9YX57 407 aa17.07■□□□□ 0.32
DNMT1-213ENST00000587604 POLR3DP05423 398 aaPredicted RBP17.07■□□□□ 0.32
DNMT1-213ENST00000587604 PTPREP23469 700 aa17.07■□□□□ 0.32
DNMT1-213ENST00000587604 HSP90AB4PQ58FF6 505 aa17.07■□□□□ 0.32
DNMT1-213ENST00000587604 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
DNMT1-213ENST00000587604 MFSD14CQ5VZR4 134 aa17.07■□□□□ 0.32
DNMT1-213ENST00000587604 TDHQ8IZJ6 230 aa17.07■□□□□ 0.32
DNMT1-213ENST00000587604 SLC17A8Q8NDX2 589 aa17.07■□□□□ 0.32
DNMT1-213ENST00000587604 HOXC6P09630 235 aa17.06■□□□□ 0.32
DNMT1-213ENST00000587604 GUCY1A2P33402 732 aa17.06■□□□□ 0.32
DNMT1-213ENST00000587604 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
DNMT1-213ENST00000587604 GABPAQ06546 454 aa17.06■□□□□ 0.32
DNMT1-213ENST00000587604 RPAP3Q9H6T3 665 aaPredicted RBP17.06■□□□□ 0.32
DNMT1-213ENST00000587604 FLRT1Q9NZU1 646 aa17.06■□□□□ 0.32
DNMT1-213ENST00000587604 BTBD7Q9P203 1132 aa17.06■□□□□ 0.32
DNMT1-213ENST00000587604 IVNS1ABPQ9Y6Y0 642 aa17.06■□□□□ 0.32
DNMT1-213ENST00000587604 DNAH12Q6ZR08 3092 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 SPDYE16A6NNV3 312 aaPredicted RBP17.05■□□□□ 0.32
DNMT1-213ENST00000587604 ATP2B2Q01814 1243 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 GRB14Q14449 540 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 SEPT2Q15019 361 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 LRRC26Q2I0M4 334 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 SLC9C2Q5TAH2 1124 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 CRNKL1Q9BZJ0 848 aaKnown RBP17.05■□□□□ 0.32
DNMT1-213ENST00000587604 UBE2OQ9C0C9 1292 aaKnown RBP17.05■□□□□ 0.32
DNMT1-213ENST00000587604 IL1RAPL2Q9NP60 686 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 HOXC10Q9NYD6 342 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 CUL9Q8IWT3 2517 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 FRMPD3Q5JV73 1810 aa17.05■□□□□ 0.32
DNMT1-213ENST00000587604 MSCO60682 206 aa17.04■□□□□ 0.32
DNMT1-213ENST00000587604 PDE6AP16499 860 aa17.04■□□□□ 0.32
DNMT1-213ENST00000587604 COG2Q14746 738 aa17.04■□□□□ 0.32
DNMT1-213ENST00000587604 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.04■□□□□ 0.32
DNMT1-213ENST00000587604 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
DNMT1-213ENST00000587604 DDX20Q9UHI6 824 aaKnown RBP17.04■□□□□ 0.32
DNMT1-213ENST00000587604 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
DNMT1-213ENST00000587604 A0A1W2PRG0 241 aa17.03■□□□□ 0.32
DNMT1-213ENST00000587604 IGHA2P01877 340 aa17.03■□□□□ 0.32
DNMT1-213ENST00000587604 CLASRPQ8N2M8 674 aaKnown RBP17.03■□□□□ 0.32
DNMT1-213ENST00000587604 DEFB123Q8N688 67 aa17.03■□□□□ 0.32
DNMT1-213ENST00000587604 NPLOC4Q8TAT6 608 aa17.03■□□□□ 0.32
DNMT1-213ENST00000587604 PANK1Q8TE04 598 aa17.03■□□□□ 0.32
DNMT1-213ENST00000587604 LPAR1Q92633 364 aa17.03■□□□□ 0.32
DNMT1-213ENST00000587604 ZNF532Q9HCE3 1301 aa17.02■□□□□ 0.32
DNMT1-213ENST00000587604 RLFQ13129 1914 aa17.02■□□□□ 0.32
DNMT1-213ENST00000587604 MPHOSPH10O00566 681 aaKnown RBP17.02■□□□□ 0.32
DNMT1-213ENST00000587604 STRNO43815 780 aa17.02■□□□□ 0.32
DNMT1-213ENST00000587604 CNGA1P29973 690 aa17.02■□□□□ 0.32
DNMT1-213ENST00000587604 KIF1BPQ96EK5 621 aa17.02■□□□□ 0.32
DNMT1-213ENST00000587604 SENP6Q9GZR1 1112 aaPredicted RBP17.02■□□□□ 0.32
DNMT1-213ENST00000587604 DCP1AQ9NPI6 582 aaPredicted RBP17.02■□□□□ 0.32
DNMT1-213ENST00000587604 TCRBV5S4A2TA0A5A2 114 aa17.01■□□□□ 0.31
DNMT1-213ENST00000587604 GOLIM4O00461 696 aa17.01■□□□□ 0.31
DNMT1-213ENST00000587604 DLL1O00548 723 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms