RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 CERKLQ49MI3 558 aaPredicted RBP14.17□□□□□ -0.14
LIG3-207ENST00000586119 CATSPERGQ6ZRH7 1159 aa14.17□□□□□ -0.14
LIG3-207ENST00000586119 AACSQ86V21 672 aa14.17□□□□□ -0.14
LIG3-207ENST00000586119 BCL11AQ9H165 835 aa14.17□□□□□ -0.14
LIG3-207ENST00000586119 GINM1Q9NU53 330 aa14.17□□□□□ -0.14
LIG3-207ENST00000586119 LAMA3Q16787 3333 aa14.17□□□□□ -0.14
LIG3-207ENST00000586119 USP17L15C9J2P7 530 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 USP17L13C9JLJ4 530 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 USP17L11C9JVI0 530 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 USP17L18D6R9N7 530 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 USP17L22D6RA61 530 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 USP17L17D6RBQ6 530 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 USP17L19D6RCP7 530 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 USP17L20D6RJB6 530 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 SMIM22K7EJ46 135 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 APBB1O00213 710 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 CAPN2P17655 700 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 RGS2P41220 211 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
LIG3-207ENST00000586119 USP17L24Q0WX57 530 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 ABCB5Q2M3G0 1257 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 Q7L0L9 218 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 CCAR1Q8IX12 1150 aaKnown RBP14.16□□□□□ -0.14
LIG3-207ENST00000586119 NPLOC4Q8TAT6 608 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 SOCS4Q8WXH5 440 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 EDC3Q96F86 508 aaKnown RBP14.16□□□□□ -0.14
LIG3-207ENST00000586119 C12orf42Q96LP6 360 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 FEZ1Q99689 392 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 RIOK1Q9BRS2 568 aaKnown RBP14.16□□□□□ -0.14
LIG3-207ENST00000586119 SERPINB13Q9UIV8 391 aa14.16□□□□□ -0.14
LIG3-207ENST00000586119 A0A1W2PPC1 479 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 A0A1W2PRG0 241 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 CYP2D6P10635 497 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 COL6A1P12109 1028 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 VCAM1P19320 739 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 BMP8BP34820 402 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 MAP2K5Q13163 448 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 PDE3AQ14432 1141 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 SEPT2Q15019 361 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 LRRC26Q2I0M4 334 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 KIAA1755Q5JYT7 1200 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 WDR78Q5VTH9 848 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 RABGAP1Q9Y3P9 1069 aa14.15□□□□□ -0.14
LIG3-207ENST00000586119 FRMPD3Q5JV73 1810 aa14.14□□□□□ -0.15
LIG3-207ENST00000586119 CHGBP05060 677 aa14.14□□□□□ -0.15
LIG3-207ENST00000586119 MAP3K12Q12852 859 aa14.14□□□□□ -0.15
LIG3-207ENST00000586119 TTC6Q86TZ1 520 aa14.14□□□□□ -0.15
LIG3-207ENST00000586119 SLC44A5Q8NCS7 719 aa14.14□□□□□ -0.15
LIG3-207ENST00000586119 TRPV1Q8NER1 839 aa14.14□□□□□ -0.15
LIG3-207ENST00000586119 KIAA1683Q9H0B3 1180 aa14.14□□□□□ -0.15
LIG3-207ENST00000586119 EHD4Q9H223 541 aa14.14□□□□□ -0.15
LIG3-207ENST00000586119 RPAP3Q9H6T3 665 aaPredicted RBP14.14□□□□□ -0.15
LIG3-207ENST00000586119 COL6A3P12111 3177 aa14.13□□□□□ -0.15
LIG3-207ENST00000586119 MAGEB6P1A0A0J9YX57 407 aa14.13□□□□□ -0.15
LIG3-207ENST00000586119 SPDYE16A6NNV3 312 aaPredicted RBP14.13□□□□□ -0.15
LIG3-207ENST00000586119 POLR3DP05423 398 aaPredicted RBP14.13□□□□□ -0.15
LIG3-207ENST00000586119 PTPREP23469 700 aa14.13□□□□□ -0.15
LIG3-207ENST00000586119 GABPAQ06546 454 aa14.13□□□□□ -0.15
LIG3-207ENST00000586119 SLC17A8Q8NDX2 589 aa14.13□□□□□ -0.15
LIG3-207ENST00000586119 RHPN1Q8TCX5 695 aa14.13□□□□□ -0.15
LIG3-207ENST00000586119 SDR42E1Q8WUS8 393 aa14.13□□□□□ -0.15
LIG3-207ENST00000586119 APBA2Q99767 749 aa14.13□□□□□ -0.15
LIG3-207ENST00000586119 CWC22Q9HCG8 908 aaKnown RBP14.13□□□□□ -0.15
LIG3-207ENST00000586119 RLFQ13129 1914 aa14.13□□□□□ -0.15
LIG3-207ENST00000586119 NAV1Q8NEY1 1877 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 ZNFX1Q9P2E3 1918 aaKnown RBP14.12□□□□□ -0.15
LIG3-207ENST00000586119 BAZ2AQ9UIF9 1905 aaKnown RBP14.12□□□□□ -0.15
LIG3-207ENST00000586119 TCRBV5S4A2TA0A5A2 114 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 PRKAB2O43741 272 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 IGSF3O75054 1194 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 PDE6AP16499 860 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 CYP2C19P33261 490 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 MDM2Q00987 491 aaPredicted RBP14.12□□□□□ -0.15
LIG3-207ENST00000586119 SLC9C2Q5TAH2 1124 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 CLEC10AQ8IUN9 316 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 SIAH1Q8IUQ4 282 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 SIRT2Q8IXJ6 389 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 TRMT44Q8IYL2 757 aaKnown RBP14.12□□□□□ -0.15
LIG3-207ENST00000586119 LCORLQ8N3X6 602 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 GTF3C2Q8WUA4 911 aaPredicted RBP14.12□□□□□ -0.15
LIG3-207ENST00000586119 DYNLL2Q96FJ2 89 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 UBE2OQ9C0C9 1292 aaKnown RBP14.12□□□□□ -0.15
LIG3-207ENST00000586119 CABP5Q9NP86 173 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 MCM9Q9NXL9 1143 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 ZNF532Q9HCE3 1301 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 SMCHD1A6NHR9 2005 aa14.12□□□□□ -0.15
LIG3-207ENST00000586119 SLC15A5A6NIM6 579 aa14.11□□□□□ -0.15
LIG3-207ENST00000586119 GOLIM4O00461 696 aa14.11□□□□□ -0.15
LIG3-207ENST00000586119 MPHOSPH10O00566 681 aaKnown RBP14.11□□□□□ -0.15
LIG3-207ENST00000586119 CNGA1P29973 690 aa14.11□□□□□ -0.15
LIG3-207ENST00000586119 USP14P54578 494 aa14.11□□□□□ -0.15
LIG3-207ENST00000586119 ANO1Q5XXA6 986 aa14.11□□□□□ -0.15
LIG3-207ENST00000586119 DNAJC2Q99543 621 aaKnown RBP14.11□□□□□ -0.15
LIG3-207ENST00000586119 SENP6Q9GZR1 1112 aaPredicted RBP14.11□□□□□ -0.15
LIG3-207ENST00000586119 ARMT1Q9H993 441 aa14.11□□□□□ -0.15
LIG3-207ENST00000586119 CYP2D7A0A087X1C5 515 aa14.1□□□□□ -0.15
LIG3-207ENST00000586119 IGHA2P01877 340 aa14.1□□□□□ -0.15
LIG3-207ENST00000586119 ATN1P54259 1190 aaPredicted RBP14.1□□□□□ -0.15
LIG3-207ENST00000586119 ATP2B2Q01814 1243 aa14.1□□□□□ -0.15
LIG3-207ENST00000586119 GRB14Q14449 540 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms