RNA–Protein interactions for RNA: ENST00000585805.5

PSME3-206, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best)

Gene PSME3, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-206ENST00000585805 PLXNB2O15031 1838 aa23.09■■□□□ 1.29
PSME3-206ENST00000585805 USP17L15C9J2P7 530 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 USP17L13C9JLJ4 530 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 USP17L11C9JVI0 530 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 USP17L18D6R9N7 530 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 USP17L22D6RA61 530 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 USP17L17D6RBQ6 530 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 USP17L19D6RCP7 530 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 USP17L20D6RJB6 530 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 HMGCRP04035 888 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 CHGBP05060 677 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 CAPN2P17655 700 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 VCAM1P19320 739 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 ERVK-9P63128 1117 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 ERVK-24P63145 666 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 USP17L24Q0WX57 530 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 ZYXQ15942 572 aaKnown RBP23.08■■□□□ 1.29
PSME3-206ENST00000585805 DCTPP1Q9H773 170 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 ATP8A2Q9NTI2 1148 aa23.08■■□□□ 1.29
PSME3-206ENST00000585805 PRKAB2O43741 272 aa23.07■■□□□ 1.28
PSME3-206ENST00000585805 CYP2D6P10635 497 aa23.07■■□□□ 1.28
PSME3-206ENST00000585805 MAPK4P31152 587 aa23.07■■□□□ 1.28
PSME3-206ENST00000585805 SEPT2Q15019 361 aa23.07■■□□□ 1.28
PSME3-206ENST00000585805 Q3C1V9 767 aa23.07■■□□□ 1.28
PSME3-206ENST00000585805 CRISPLD2Q9H0B8 497 aa23.07■■□□□ 1.28
PSME3-206ENST00000585805 LBX2Q6XYB7 198 aa23.06■■□□□ 1.28
PSME3-206ENST00000585805 CATSPERGQ6ZRH7 1159 aa23.06■■□□□ 1.28
PSME3-206ENST00000585805 SOCS4Q8WXH5 440 aa23.06■■□□□ 1.28
PSME3-206ENST00000585805 DEFB118Q96PH6 123 aa23.06■■□□□ 1.28
PSME3-206ENST00000585805 PORCNQ9H237 461 aa23.06■■□□□ 1.28
PSME3-206ENST00000585805 SWAP70Q9UH65 585 aa23.06■■□□□ 1.28
PSME3-206ENST00000585805 RABGAP1Q9Y3P9 1069 aa23.06■■□□□ 1.28
PSME3-206ENST00000585805 CNMDO75829 334 aa23.05■■□□□ 1.28
PSME3-206ENST00000585805 FARP2O94887 1054 aaPredicted RBP23.05■■□□□ 1.28
PSME3-206ENST00000585805 HABP4Q5JVS0 413 aaKnown RBP23.05■■□□□ 1.28
PSME3-206ENST00000585805 SLC44A5Q8NCS7 719 aa23.05■■□□□ 1.28
PSME3-206ENST00000585805 TRIB2Q92519 343 aa23.05■■□□□ 1.28
PSME3-206ENST00000585805 USP6NLQ92738 828 aa23.05■■□□□ 1.28
PSME3-206ENST00000585805 PAGR1Q9BTK6 254 aa23.05■■□□□ 1.28
PSME3-206ENST00000585805 ECHDC1Q9NTX5 307 aa23.05■■□□□ 1.28
PSME3-206ENST00000585805 A0A1W2PRG0 241 aa23.04■■□□□ 1.28
PSME3-206ENST00000585805 H0YGN5 161 aa23.04■■□□□ 1.28
PSME3-206ENST00000585805 XRCC5P13010 732 aaKnown RBP23.04■■□□□ 1.28
PSME3-206ENST00000585805 DYNLL2Q96FJ2 89 aa23.04■■□□□ 1.28
PSME3-206ENST00000585805 NUDT12Q9BQG2 462 aa23.04■■□□□ 1.28
PSME3-206ENST00000585805 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.04■■□□□ 1.288e-6■□□□□ 10.8
PSME3-206ENST00000585805 TRIM32Q13049 653 aa23.03■■□□□ 1.28
PSME3-206ENST00000585805 MORN1Q5T089 497 aa23.03■■□□□ 1.28
PSME3-206ENST00000585805 MAP3K21Q5TCX8 1036 aa23.03■■□□□ 1.28
PSME3-206ENST00000585805 C12orf60Q5U649 245 aa23.03■■□□□ 1.28
PSME3-206ENST00000585805 ZSCAN25Q6NSZ9 544 aa23.03■■□□□ 1.28
PSME3-206ENST00000585805 GPR142Q7Z601 462 aa23.03■■□□□ 1.28
PSME3-206ENST00000585805 MYH7P12883 1935 aa23.03■■□□□ 1.28
PSME3-206ENST00000585805 CEP290O15078 2479 aa23.03■■□□□ 1.28
PSME3-206ENST00000585805 TMEM179Q6ZVK1 233 aa23.02■■□□□ 1.28
PSME3-206ENST00000585805 HTATIP2Q9BUP3 242 aa23.02■■□□□ 1.28
PSME3-206ENST00000585805 PUS7LQ9H0K6 701 aaKnown RBP23.02■■□□□ 1.28
PSME3-206ENST00000585805 RPAP3Q9H6T3 665 aaPredicted RBP23.02■■□□□ 1.28
PSME3-206ENST00000585805 RPTORQ8N122 1335 aa23.02■■□□□ 1.28
PSME3-206ENST00000585805 SPDYE16A6NNV3 312 aaPredicted RBP23.01■■□□□ 1.27
PSME3-206ENST00000585805 SMIM22K7EJ46 135 aa23.01■■□□□ 1.27
PSME3-206ENST00000585805 MPHOSPH10O00566 681 aaKnown RBP23.01■■□□□ 1.27
PSME3-206ENST00000585805 TFRCP02786 760 aaKnown RBP23.01■■□□□ 1.27
PSME3-206ENST00000585805 CYP2B6P20813 491 aa23.01■■□□□ 1.27
PSME3-206ENST00000585805 PLEKHH3Q7Z736 793 aa23.01■■□□□ 1.27
PSME3-206ENST00000585805 CYP2D7A0A087X1C5 515 aa23.01■■□□□ 1.27
PSME3-206ENST00000585805 USP17L12C9JPN9 530 aa23.01■■□□□ 1.27
PSME3-206ENST00000585805 USP17L21D6R901 530 aa23.01■■□□□ 1.27
PSME3-206ENST00000585805 SIAH1Q8IUQ4 282 aa23.01■■□□□ 1.27
PSME3-206ENST00000585805 KBTBD3Q8NAB2 608 aa23.01■■□□□ 1.27
PSME3-206ENST00000585805 HMX1Q9NP08 348 aaPredicted RBP23.01■■□□□ 1.27
PSME3-206ENST00000585805 BAZ2AQ9UIF9 1905 aaKnown RBP23■■□□□ 1.27
PSME3-206ENST00000585805 AKR1B1P15121 316 aa23■■□□□ 1.27
PSME3-206ENST00000585805 CCNA1P78396 465 aa23■■□□□ 1.27
PSME3-206ENST00000585805 C16orf86Q6ZW13 317 aa23■■□□□ 1.27
PSME3-206ENST00000585805 TRMT44Q8IYL2 757 aaKnown RBP23■■□□□ 1.27
PSME3-206ENST00000585805 DPF3Q92784 378 aa23■■□□□ 1.27
PSME3-206ENST00000585805 CCDC17Q96LX7 622 aa23■■□□□ 1.27
PSME3-206ENST00000585805 BTBD7Q9P203 1132 aa23■■□□□ 1.27
PSME3-206ENST00000585805 COLQQ9Y215 455 aaPredicted RBP23■■□□□ 1.27
PSME3-206ENST00000585805 PCDHB15Q9Y5E8 787 aa23■■□□□ 1.27
PSME3-206ENST00000585805 SLC4A4Q9Y6R1 1079 aa23■■□□□ 1.27
PSME3-206ENST00000585805 RANBP2P49792 3224 aaKnown RBP22.99■■□□□ 1.27
PSME3-206ENST00000585805 RGS2P41220 211 aa22.99■■□□□ 1.27
PSME3-206ENST00000585805 CDK8P49336 464 aa22.99■■□□□ 1.27
PSME3-206ENST00000585805 KIAA1755Q5JYT7 1200 aa22.99■■□□□ 1.27
PSME3-206ENST00000585805 CCAR1Q8IX12 1150 aaKnown RBP22.99■■□□□ 1.27
PSME3-206ENST00000585805 GPATCH3Q96I76 525 aa22.99■■□□□ 1.27
PSME3-206ENST00000585805 APBA2Q99767 749 aa22.99■■□□□ 1.27
PSME3-206ENST00000585805 PRKAR2AP13861 404 aaKnown RBP22.98■■□□□ 1.27
PSME3-206ENST00000585805 TSHZ3Q63HK5 1081 aa22.98■■□□□ 1.27
PSME3-206ENST00000585805 CTR9Q6PD62 1173 aa22.98■■□□□ 1.27
PSME3-206ENST00000585805 CLEC10AQ8IUN9 316 aa22.98■■□□□ 1.27
PSME3-206ENST00000585805 AMOTL1Q8IY63 956 aa22.98■■□□□ 1.27
PSME3-206ENST00000585805 ANKLE1Q8NAG6 615 aa22.98■■□□□ 1.27
PSME3-206ENST00000585805 DDRGK1Q96HY6 314 aa22.98■■□□□ 1.27
PSME3-206ENST00000585805 STRBPQ96SI9 672 aaKnown RBP22.98■■□□□ 1.27
PSME3-206ENST00000585805 TMX2Q9Y320 296 aa22.98■■□□□ 1.27
PSME3-206ENST00000585805 ZKSCAN1P17029 563 aaPredicted RBP22.97■■□□□ 1.27
PSME3-206ENST00000585805 ICA1Q05084 483 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms