RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 RGS2P41220 211 aa17.64■□□□□ 0.41
SDF2-202ENST00000585428 USP5P45974 858 aa17.64■□□□□ 0.41
SDF2-202ENST00000585428 PDE3AQ14432 1141 aa17.64■□□□□ 0.41
SDF2-202ENST00000585428 CERKLQ49MI3 558 aaPredicted RBP17.64■□□□□ 0.41
SDF2-202ENST00000585428 GPR153Q6NV75 609 aa17.64■□□□□ 0.41
SDF2-202ENST00000585428 TTC6Q86TZ1 520 aa17.64■□□□□ 0.41
SDF2-202ENST00000585428 PFASO15067 1338 aa17.64■□□□□ 0.41
SDF2-202ENST00000585428 PLXNB2O15031 1838 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 LAMA3Q16787 3333 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
SDF2-202ENST00000585428 CCND3P30281 292 aaPredicted RBP17.63■□□□□ 0.41
SDF2-202ENST00000585428 PLCD1P51178 756 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 USP14P54578 494 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 MAP3K12Q12852 859 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 CEP85Q6P2H3 762 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 LBX2Q6XYB7 198 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 ITPRIPQ8IWB1 547 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 CCAR1Q8IX12 1150 aaKnown RBP17.63■□□□□ 0.41
SDF2-202ENST00000585428 ACER1Q8TDN7 264 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
SDF2-202ENST00000585428 RIOK1Q9BRS2 568 aaKnown RBP17.63■□□□□ 0.41
SDF2-202ENST00000585428 PAGR1Q9BTK6 254 aa17.63■□□□□ 0.41
SDF2-202ENST00000585428 COL6A3P12111 3177 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 SYN1P17600 705 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 GUCY1A2P33402 732 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 SHMT1P34896 483 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 MAP2K5Q13163 448 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 RAB3GAP1Q15042 981 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 ABCB5Q2M3G0 1257 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 LRIT3Q3SXY7 679 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 FTSJ3Q8IY81 847 aaKnown RBP17.62■□□□□ 0.41
SDF2-202ENST00000585428 APBA2Q99767 749 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 ATAD5Q96QE3 1844 aa17.62■□□□□ 0.41
SDF2-202ENST00000585428 IGHA2P01877 340 aa17.61■□□□□ 0.41
SDF2-202ENST00000585428 PTPREP23469 700 aa17.61■□□□□ 0.41
SDF2-202ENST00000585428 MAGEA10P43363 369 aaPredicted RBP17.61■□□□□ 0.41
SDF2-202ENST00000585428 CCNA1P78396 465 aa17.61■□□□□ 0.41
SDF2-202ENST00000585428 GABPAQ06546 454 aa17.61■□□□□ 0.41
SDF2-202ENST00000585428 ZYXQ15942 572 aaKnown RBP17.61■□□□□ 0.41
SDF2-202ENST00000585428 FLRT1Q9NZU1 646 aa17.61■□□□□ 0.41
SDF2-202ENST00000585428 BTBD7Q9P203 1132 aa17.61■□□□□ 0.41
SDF2-202ENST00000585428 SLC15A5A6NIM6 579 aa17.6■□□□□ 0.41
SDF2-202ENST00000585428 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
SDF2-202ENST00000585428 HOXC6P09630 235 aa17.6■□□□□ 0.41
SDF2-202ENST00000585428 VCAM1P19320 739 aa17.6■□□□□ 0.41
SDF2-202ENST00000585428 AACSQ86V21 672 aa17.6■□□□□ 0.41
SDF2-202ENST00000585428 ERC1Q8IUD2 1116 aa17.6■□□□□ 0.41
SDF2-202ENST00000585428 CABP5Q9NP86 173 aa17.6■□□□□ 0.41
SDF2-202ENST00000585428 EXOC6BQ9Y2D4 811 aa17.6■□□□□ 0.41
SDF2-202ENST00000585428 LRRC26Q2I0M4 334 aa17.59■□□□□ 0.41
SDF2-202ENST00000585428 SLC17A8Q8NDX2 589 aa17.59■□□□□ 0.41
SDF2-202ENST00000585428 FEZ1Q99689 392 aa17.59■□□□□ 0.41
SDF2-202ENST00000585428 MAGEB6P1A0A0J9YX57 407 aa17.58■□□□□ 0.4
SDF2-202ENST00000585428 A0A1W2PRG0 241 aa17.58■□□□□ 0.4
SDF2-202ENST00000585428 SEPT2Q15019 361 aa17.58■□□□□ 0.4
SDF2-202ENST00000585428 TTF1Q15361 905 aaPredicted RBP17.58■□□□□ 0.4
SDF2-202ENST00000585428 MFSD14CQ5VZR4 134 aa17.58■□□□□ 0.4
SDF2-202ENST00000585428 TDHQ8IZJ6 230 aa17.58■□□□□ 0.4
SDF2-202ENST00000585428 RPAP3Q9H6T3 665 aaPredicted RBP17.58■□□□□ 0.4
SDF2-202ENST00000585428 A0A0C4DFX4 3053 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 ALPK3Q96L96 1907 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 FOCADQ5VW36 1801 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 SPDYE16A6NNV3 312 aaPredicted RBP17.57■□□□□ 0.4
SDF2-202ENST00000585428 POLR3DP05423 398 aaPredicted RBP17.57■□□□□ 0.4
SDF2-202ENST00000585428 GRB14Q14449 540 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 COG2Q14746 738 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 HSP90AB4PQ58FF6 505 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 SLC9C2Q5TAH2 1124 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 NPLOC4Q8TAT6 608 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 RHPN1Q8TCX5 695 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 UBE2OQ9C0C9 1292 aaKnown RBP17.57■□□□□ 0.4
SDF2-202ENST00000585428 HOXC10Q9NYD6 342 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 DNAH12Q6ZR08 3092 aa17.57■□□□□ 0.4
SDF2-202ENST00000585428 MAST2Q6P0Q8 1798 aa17.56■□□□□ 0.4
SDF2-202ENST00000585428 TCRBV5S4A2TA0A5A2 114 aa17.56■□□□□ 0.4
SDF2-202ENST00000585428 PDE6AP16499 860 aa17.56■□□□□ 0.4
SDF2-202ENST00000585428 ATP2B2Q01814 1243 aa17.56■□□□□ 0.4
SDF2-202ENST00000585428 EVX2Q03828 476 aa17.56■□□□□ 0.4
SDF2-202ENST00000585428 SIAH1Q8IUQ4 282 aa17.56■□□□□ 0.4
SDF2-202ENST00000585428 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.56■□□□□ 0.4
SDF2-202ENST00000585428 CWC22Q9HCG8 908 aaKnown RBP17.56■□□□□ 0.4
SDF2-202ENST00000585428 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
SDF2-202ENST00000585428 CDK5RAP2Q96SN8 1893 aa17.56■□□□□ 0.4
SDF2-202ENST00000585428 MYO5AQ9Y4I1 1855 aaKnown RBP17.56■□□□□ 0.4
SDF2-202ENST00000585428 STRNO43815 780 aa17.55■□□□□ 0.4
SDF2-202ENST00000585428 HNRNPUQ00839 825 aaKnown RBP eCLIP17.55■□□□□ 0.4
SDF2-202ENST00000585428 DEFB123Q8N688 67 aa17.55■□□□□ 0.4
SDF2-202ENST00000585428 TRPV1Q8NER1 839 aa17.55■□□□□ 0.4
SDF2-202ENST00000585428 PANK1Q8TE04 598 aa17.55■□□□□ 0.4
SDF2-202ENST00000585428 LPAR1Q92633 364 aa17.55■□□□□ 0.4
SDF2-202ENST00000585428 CRNKL1Q9BZJ0 848 aaKnown RBP17.55■□□□□ 0.4
SDF2-202ENST00000585428 SENP6Q9GZR1 1112 aaPredicted RBP17.55■□□□□ 0.4
SDF2-202ENST00000585428 DCP1AQ9NPI6 582 aaPredicted RBP17.55■□□□□ 0.4
SDF2-202ENST00000585428 MCM9Q9NXL9 1143 aa17.55■□□□□ 0.4
SDF2-202ENST00000585428 DDX20Q9UHI6 824 aaKnown RBP17.55■□□□□ 0.4
SDF2-202ENST00000585428 IVNS1ABPQ9Y6Y0 642 aa17.55■□□□□ 0.4
SDF2-202ENST00000585428 ZNF532Q9HCE3 1301 aa17.54■□□□□ 0.4
SDF2-202ENST00000585428 MSCO60682 206 aa17.54■□□□□ 0.4
SDF2-202ENST00000585428 CYP2C19P33261 490 aa17.54■□□□□ 0.4
SDF2-202ENST00000585428 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms