RNA–Protein interactions for RNA: ENST00000585229.1

SMCHD1-212, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-212ENST00000585229 MINDY4BA8MYZ0 360 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 MYO1BO43795 1136 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 EXOSC10Q01780 885 aaKnown RBP11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 NBPF9Q3BBW0 867 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 C16orf86Q6ZW13 317 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 SAMD7Q7Z3H4 446 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 TTC6Q86TZ1 520 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 NCOA7Q8NI08 942 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 TRPM4Q8TD43 1214 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 FAM151AQ8WW52 585 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 KRT23Q9C075 422 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 DHX36Q9H2U1 1008 aaKnown RBP11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 ADARB2Q9NS39 739 aaKnown RBP11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 CYP46A1Q9Y6A2 500 aa11.67□□□□□ -0.54
SMCHD1-212ENST00000585229 BHMG1C9JSJ3 638 aaPredicted RBP11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 SMIM22K7EJ46 135 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 ZMYND10O75800 440 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 POLR3DP05423 398 aaPredicted RBP11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 SLC3A2P08195 630 aaKnown RBP11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 EPS15P42566 896 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 MCM2P49736 904 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 PLCD1P51178 756 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 NEK4P51957 841 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 CACNB3P54284 484 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 ANTXR2P58335 489 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 PICALMQ13492 652 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 MFSD6Q6ZSS7 791 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 DHX32Q7L7V1 743 aaKnown RBP11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 ZFPM1Q8IX07 1006 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 UPF3BQ9BZI7 483 aaKnown RBP11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 RBM27Q9P2N5 1060 aaKnown RBP11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 PGAP2Q9UHJ9 254 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 SAP30BPQ9UHR5 308 aaKnown RBP11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 PLIN4Q96Q06 1357 aa11.66□□□□□ -0.54
SMCHD1-212ENST00000585229 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 POLR2AP24928 1970 aaKnown RBP11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 CLRN2A0PK11 232 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 DDTLA6NHG4 134 aaPredicted RBP11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 CD2BP2O95400 341 aaKnown RBP11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 HLA-DOAP06340 250 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 CPA1P15085 419 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 LMOD1P29536 600 aaPredicted RBP11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 HIRAP54198 1017 aaPredicted RBP11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 PDE4BQ07343 736 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 TRDNQ13061 729 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 TNFAIP1Q13829 316 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 HIC1Q14526 733 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 TBC1D10BQ4KMP7 808 aaPredicted RBP11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 RALYLQ86SE5 291 aaKnown RBP11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 NKX2-3Q8TAU0 364 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 PDRG1Q9NUG6 133 aa11.65□□□□□ -0.54
SMCHD1-212ENST00000585229 B4E1Z4 1266 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 MCM5P33992 734 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 CDK8P49336 464 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 MAP3K10Q02779 954 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 CYB5R4Q7L1T6 521 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 APOBEC3FQ8IUX4 373 aaKnown RBP11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 ESR2Q92731 530 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 DYNLL2Q96FJ2 89 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 TBC1D2Q9BYX2 928 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 DNAJC18Q9H819 358 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 ZNF287Q9HBT7 754 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 INCENPQ9NQS7 918 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 KIAA1468Q9P260 1216 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 SWAP70Q9UH65 585 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 SERPINB13Q9UIV8 391 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 HACL1Q9UJ83 578 aa11.64□□□□□ -0.55
SMCHD1-212ENST00000585229 ASTN2O75129 1339 aaPredicted RBP11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 UTRNP46939 3433 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 POTECB2RU33 542 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 TCP10L2B9ZVM9 353 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 PRC1O43663 620 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 RASA1P20936 1047 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 TNNI2P48788 182 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 AK2P54819 239 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 EVCP57679 992 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 TCP10Q12799 353 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 TOB2Q14106 344 aaPredicted RBP11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 ANKRD1Q15327 319 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 USP50Q70EL3 339 aaPredicted RBP11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 FOXP4Q8IVH2 680 aaPredicted RBP11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 TMEM87BQ96K49 555 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 TEPSINQ96N21 525 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 VEZTQ9HBM0 779 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 ZSWIM5Q9P217 1185 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 PI4KBQ9UBF8 816 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 RABGEF1Q9UJ41 708 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 PPP2R3BQ9Y5P8 575 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 PAPPA2Q9BXP8 1791 aa11.63□□□□□ -0.55
SMCHD1-212ENST00000585229 IQCA1LA6NCM1 817 aa11.62□□□□□ -0.55
SMCHD1-212ENST00000585229 K7ELQ4 463 aaPredicted RBP11.62□□□□□ -0.55
SMCHD1-212ENST00000585229 SH2B2O14492 632 aaPredicted RBP11.62□□□□□ -0.55
SMCHD1-212ENST00000585229 KDM4AO75164 1064 aa11.62□□□□□ -0.55
SMCHD1-212ENST00000585229 SHMT1P34896 483 aa11.62□□□□□ -0.55
SMCHD1-212ENST00000585229 NOVP48745 357 aa11.62□□□□□ -0.55
SMCHD1-212ENST00000585229 BECN1Q14457 450 aa11.62□□□□□ -0.55
SMCHD1-212ENST00000585229 Q6ZUG5 572 aa11.62□□□□□ -0.55
SMCHD1-212ENST00000585229 SPNS2Q8IVW8 549 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms