RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 OTUD7BQ6GQQ9 843 aa16.79■□□□□ 0.28
MKS1-213ENST00000585134 FAM43AQ8N2R8 423 aa16.79■□□□□ 0.28
MKS1-213ENST00000585134 WDR18Q9BV38 432 aa16.79■□□□□ 0.28
MKS1-213ENST00000585134 NBPF3Q9H094 633 aa16.79■□□□□ 0.28
MKS1-213ENST00000585134 CTNNA3Q9UI47 895 aa16.79■□□□□ 0.28
MKS1-213ENST00000585134 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
MKS1-213ENST00000585134 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.79■□□□□ 0.28
MKS1-213ENST00000585134 TBC1D8O95759 1140 aa16.78■□□□□ 0.28
MKS1-213ENST00000585134 TSPY3P0CV98 308 aa16.78■□□□□ 0.28
MKS1-213ENST00000585134 TSPY8P0CW00 308 aa16.78■□□□□ 0.28
MKS1-213ENST00000585134 TAF1CQ15572 869 aaPredicted RBP16.78■□□□□ 0.28
MKS1-213ENST00000585134 IMMTQ16891 758 aaKnown RBP16.78■□□□□ 0.28
MKS1-213ENST00000585134 TMOD4Q9NZQ9 345 aa16.78■□□□□ 0.28
MKS1-213ENST00000585134 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
MKS1-213ENST00000585134 GREB1LQ9C091 1923 aaPredicted RBP16.78■□□□□ 0.28
MKS1-213ENST00000585134 NEDD4P46934 1319 aa16.77■□□□□ 0.28
MKS1-213ENST00000585134 TSPY2A6NKD2 308 aa16.77■□□□□ 0.28
MKS1-213ENST00000585134 USP17L10C9JJH3 530 aa16.77■□□□□ 0.28
MKS1-213ENST00000585134 RANBP6O60518 1105 aaKnown RBP16.77■□□□□ 0.28
MKS1-213ENST00000585134 HSPA8P11142 646 aaKnown RBP16.77■□□□□ 0.28
MKS1-213ENST00000585134 BACE1P56817 501 aa16.77■□□□□ 0.28
MKS1-213ENST00000585134 TFAP4Q01664 338 aa16.77■□□□□ 0.28
MKS1-213ENST00000585134 MOGSQ13724 837 aa16.77■□□□□ 0.28
MKS1-213ENST00000585134 FASTKD5Q7L8L6 764 aaKnown RBP16.77■□□□□ 0.28
MKS1-213ENST00000585134 LSG1Q9H089 658 aaKnown RBP16.77■□□□□ 0.28
MKS1-213ENST00000585134 ARHGEF10LQ9HCE6 1279 aa16.77■□□□□ 0.28
MKS1-213ENST00000585134 GTF3C3Q9Y5Q9 886 aa16.77■□□□□ 0.28
MKS1-213ENST00000585134 RBM8AQ9Y5S9 174 aaKnown RBP16.77■□□□□ 0.28
MKS1-213ENST00000585134 PDHXO00330 501 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 CA12O43570 354 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 RAD21O60216 631 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 ALDH1A1P00352 501 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 CTCFP49711 727 aaPredicted RBP16.76■□□□□ 0.27
MKS1-213ENST00000585134 AKNAD1Q5T1N1 836 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 TREML2Q5T2D2 321 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 GPAT2Q6NUI2 795 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 USP17L2Q6R6M4 530 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 ANKRD23Q86SG2 305 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 STAG1Q8WVM7 1258 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.76■□□□□ 0.27
MKS1-213ENST00000585134 RNF41Q9H4P4 317 aaPredicted RBP16.76■□□□□ 0.27
MKS1-213ENST00000585134 SAGE1Q9NXZ1 904 aa16.76■□□□□ 0.27
MKS1-213ENST00000585134 A0A1W2PRG0 241 aa16.75■□□□□ 0.27
MKS1-213ENST00000585134 ORC4O43929 436 aa16.75■□□□□ 0.27
MKS1-213ENST00000585134 CRHR2Q13324 411 aa16.75■□□□□ 0.27
MKS1-213ENST00000585134 MFSD6Q6ZSS7 791 aa16.75■□□□□ 0.27
MKS1-213ENST00000585134 PROCA1Q8NCQ7 364 aaPredicted RBP16.75■□□□□ 0.27
MKS1-213ENST00000585134 AGTPBP1Q9UPW5 1226 aa16.75■□□□□ 0.27
MKS1-213ENST00000585134 PLIN4Q96Q06 1357 aa16.75■□□□□ 0.27
MKS1-213ENST00000585134 C19orf81C9J6K1 198 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 EEF2P13639 858 aaKnown RBP16.74■□□□□ 0.27
MKS1-213ENST00000585134 LBX1P52954 281 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 USP14P54578 494 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 SH3D19Q5HYK7 790 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 LRRC47Q8N1G4 583 aaKnown RBP16.74■□□□□ 0.27
MKS1-213ENST00000585134 NEDD1Q8NHV4 660 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 CEP95Q96GE4 821 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 KIAA1683Q9H0B3 1180 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 R3HDMLQ9H3Y0 253 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 SH2D4AQ9H788 454 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 KANSL2Q9H9L4 492 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 ZFYVE28Q9HCC9 887 aa16.74■□□□□ 0.27
MKS1-213ENST00000585134 IGKV6D-41A0A0C4DH26 115 aa16.73■□□□□ 0.27
MKS1-213ENST00000585134 B4E1Z4 1266 aa16.73■□□□□ 0.27
MKS1-213ENST00000585134 NMT2O60551 498 aa16.73■□□□□ 0.27
MKS1-213ENST00000585134 CYP21A2P08686 494 aa16.73■□□□□ 0.27
MKS1-213ENST00000585134 CYP2C8P10632 490 aa16.73■□□□□ 0.27
MKS1-213ENST00000585134 NKX2-3Q8TAU0 364 aa16.73■□□□□ 0.27
MKS1-213ENST00000585134 MAP4K1Q92918 833 aa16.73■□□□□ 0.27
MKS1-213ENST00000585134 PARK7Q99497 189 aaKnown RBP16.73■□□□□ 0.27
MKS1-213ENST00000585134 EMILIN3Q9NT22 766 aa16.73■□□□□ 0.27
MKS1-213ENST00000585134 TAF6LQ9Y6J9 622 aa16.73■□□□□ 0.27
MKS1-213ENST00000585134 VCAM1P19320 739 aa16.72■□□□□ 0.27
MKS1-213ENST00000585134 IRX3P78415 501 aaPredicted RBP16.72■□□□□ 0.27
MKS1-213ENST00000585134 SIAH1Q8IUQ4 282 aa16.72■□□□□ 0.27
MKS1-213ENST00000585134 SPICE1Q8N0Z3 855 aa16.72■□□□□ 0.27
MKS1-213ENST00000585134 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
MKS1-213ENST00000585134 CLIP2Q9UDT6 1046 aa16.72■□□□□ 0.27
MKS1-213ENST00000585134 TMX2Q9Y320 296 aa16.72■□□□□ 0.27
MKS1-213ENST00000585134 MYH4Q9Y623 1939 aa16.72■□□□□ 0.27
MKS1-213ENST00000585134 KDM4AO75164 1064 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 ECM2O94769 699 aaPredicted RBP16.71■□□□□ 0.27
MKS1-213ENST00000585134 FGRP09769 529 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 PCP11498 1178 aaKnown RBP16.71■□□□□ 0.27
MKS1-213ENST00000585134 OSBPP22059 807 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 PABPC4Q13310 644 aaKnown RBP eCLIP16.71■□□□□ 0.27
MKS1-213ENST00000585134 SAMD1Q6SPF0 538 aaPredicted RBP16.71■□□□□ 0.27
MKS1-213ENST00000585134 ESR2Q92731 530 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 C12orf42Q96LP6 360 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 ZKSCAN3Q9BRR0 538 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 RPAP3Q9H6T3 665 aaPredicted RBP16.71■□□□□ 0.27
MKS1-213ENST00000585134 ZCCHC17Q9NP64 241 aaKnown RBP16.71■□□□□ 0.27
MKS1-213ENST00000585134 MTMR4Q9NYA4 1195 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 NYAP2Q9P242 653 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 CPA4Q9UI42 421 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 PNMA3Q9UL41 463 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 ISY1Q9ULR0 285 aaKnown RBP16.71■□□□□ 0.27
MKS1-213ENST00000585134 STX8Q9UNK0 236 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 MTMR7Q9Y216 660 aa16.71■□□□□ 0.27
MKS1-213ENST00000585134 SLC27A2O14975 620 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms