RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CEBPAP49715 358 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 RAD51AP2Q09MP3 1159 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 PTCH1Q13635 1447 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 ATG4DQ86TL0 474 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 SPPL2CQ8IUH8 684 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 NWD2Q9ULI1 1742 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 PPM1GO15355 546 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 ALX3O95076 343 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 ADH5P11766 374 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 NME2P22392 152 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 CD97P48960 835 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 DSC3Q14574 896 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 KANSL3Q9P2N6 904 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 CAMTA1Q9Y6Y1 1673 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 A0A1W2PP55 124 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 SOX1O00570 391 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 SPINK2P20155 84 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 MAOBP27338 520 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 KIR3DL1P43629 444 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 SMYD4Q8IYR2 804 aaPredicted RBP2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 RBCK1Q9BYM8 510 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 LRRC4CQ9HCJ2 640 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 MRS2Q9HD23 443 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 PRKAG2Q9UGJ0 569 aa2.73□□□□□ -1.97
SMCHD1-211ENST00000584897 MAST1Q9Y2H9 1570 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 TROQ12816 1431 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 FANCGO15287 622 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 MAPK1P28482 360 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 TAGLNQ01995 201 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 FZD5Q13467 585 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 TMEM67Q5HYA8 995 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 SV2BQ7L1I2 683 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 METTL16Q86W50 562 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 ANKLE2Q86XL3 938 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 OXR1Q8N573 874 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 UBASH3BQ8TF42 649 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 SNCAIPQ9Y6H5 919 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 ARHGEF5Q12774 1597 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 LOC100289279A0A1B0GTE1 492 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 H3BRB1 525 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 TRIM37O94972 964 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 EPHA1P21709 976 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 SKIDA1Q1XH10 827 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 GJD3Q8N144 294 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 AGGF1Q8N302 714 aaeCLIP2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 TUT1Q9H6E5 874 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 RC3H2Q9HBD1 1191 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 AKAP2Q9Y2D5 859 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 DCCP43146 1447 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 HMX2A2RU54 273 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 AOC2O75106 756 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 BPNT1O95861 308 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 ITGB2P05107 769 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 PREPP48147 710 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 XPCQ01831 940 aaPredicted RBP2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 DUSP4Q13115 394 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 SLC23A3Q6PIS1 610 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 RNF214Q8ND24 703 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 DAGLAQ9Y4D2 1042 aa2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 EIF2AK4Q9P2K8 1649 aaKnown RBP2.72□□□□□ -1.97
SMCHD1-211ENST00000584897 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 PLEKHD1A6NEE1 506 aa2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 APPP05067 770 aa2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 ITPKAP23677 461 aa2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 RAP1GAPP47736 663 aa2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 IKZF1Q13422 519 aa2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 KCNMB1Q16558 191 aa2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 FOXD4L6Q3SYB3 417 aaPredicted RBP2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 FOXD4L3Q6VB84 417 aaPredicted RBP2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 POU5F2Q8N7G0 328 aa2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 ALKBH8Q96BT7 664 aaKnown RBP2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 MRRFQ96E11 262 aaKnown RBP2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 UBL7Q96S82 380 aaPredicted RBP2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 ZKSCAN3Q9BRR0 538 aa2.71□□□□□ -1.97
SMCHD1-211ENST00000584897 ADGRB3O60242 1522 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 GSTP1P09211 210 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 ZNF16P17020 682 aaPredicted RBP2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 RNF4P78317 190 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 SFRP5Q5T4F7 317 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 MFSD2AQ8NA29 543 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 FBLIM1Q8WUP2 373 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 SAP130Q9H0E3 1048 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 WDR90Q96KV7 1748 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 PARD3Q8TEW0 1356 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 SYCP2Q9BX26 1530 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 B3GALT4O96024 378 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 NCLP19338 710 aaKnown RBP2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 KIF4BQ2VIQ3 1234 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 TMPRSS7Q7RTY8 843 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 TMEM63CQ9P1W3 806 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 CNTN3Q9P232 1028 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 VPS8Q8N3P4 1428 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 GLI3P10071 1580 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 QSER1Q2KHR3 1735 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 TMEM131LA2VDJ0 1609 aa2.71□□□□□ -1.98
SMCHD1-211ENST00000584897 ABLIM1O14639 778 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 EIF4BP23588 611 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 GRNP28799 593 aaKnown RBP2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 ERVK-24P63145 666 aa2.7□□□□□ -1.98
SMCHD1-211ENST00000584897 FMR1Q06787 632 aaKnown RBP eCLIP2.7□□□□□ -1.983e-7■■■■■ 70.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms