RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 MYH4Q9Y623 1939 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 GDF11O95390 407 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 CCT2P78371 535 aaKnown RBP21.25■□□□□ 0.99
NDEL1-217ENST00000583683 JAG1P78504 1218 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 ABCB5Q2M3G0 1257 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 RAB11FIP4Q86YS3 637 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 ZNF654Q8IZM8 581 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 ATAD5Q96QE3 1844 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 PHF20L1A8MW92 1017 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 ZBTB43O43298 467 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 MICU3Q86XE3 530 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 CLEC10AQ8IUN9 316 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 RRAGCQ9HB90 399 aa21.25■□□□□ 0.99
NDEL1-217ENST00000583683 NCOA5Q9HCD5 579 aaKnown RBP21.25■□□□□ 0.99
NDEL1-217ENST00000583683 SSC5DA1L4H1 1573 aa21.24■□□□□ 0.99
NDEL1-217ENST00000583683 ADM5C9JUS6 153 aa21.24■□□□□ 0.99
NDEL1-217ENST00000583683 VEGFAP15692 232 aaPredicted RBP21.24■□□□□ 0.99
NDEL1-217ENST00000583683 RXRAP19793 462 aa21.24■□□□□ 0.99
NDEL1-217ENST00000583683 TMEM179Q6ZVK1 233 aa21.24■□□□□ 0.99
NDEL1-217ENST00000583683 KRT26Q7Z3Y9 468 aa21.24■□□□□ 0.99
NDEL1-217ENST00000583683 HOOK2Q96ED9 719 aa21.24■□□□□ 0.99
NDEL1-217ENST00000583683 GH2P01242 217 aa21.23■□□□□ 0.99
NDEL1-217ENST00000583683 GUCY1A2P33402 732 aa21.23■□□□□ 0.99
NDEL1-217ENST00000583683 TROAPQ12815 778 aa21.23■□□□□ 0.99
NDEL1-217ENST00000583683 DLK2Q6UY11 383 aa21.23■□□□□ 0.99
NDEL1-217ENST00000583683 SYNE3Q6ZMZ3 975 aa21.23■□□□□ 0.99
NDEL1-217ENST00000583683 TMEM47Q9BQJ4 181 aa21.23■□□□□ 0.99
NDEL1-217ENST00000583683 NID2Q14112 1375 aa21.23■□□□□ 0.99
NDEL1-217ENST00000583683 POTEIP0CG38 1075 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 POTEJP0CG39 1038 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 METAP2P50579 478 aaKnown RBP eCLIP21.22■□□□□ 0.99
NDEL1-217ENST00000583683 RCAN1P53805 252 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 DCAF15Q66K64 600 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 CATIPQ7Z7H3 387 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 KAT14Q9H8E8 782 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 TTLL1O95922 423 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 CAP2P40123 477 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 SEPT2Q15019 361 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 SUPT20HL1Q3ZLR7 823 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 CCDC144CPQ8IYA2 1237 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 PNMA1Q8ND90 353 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 KANSL2Q9H9L4 492 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 CABP5Q9NP86 173 aa21.22■□□□□ 0.99
NDEL1-217ENST00000583683 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.22■□□□□ 0.99
NDEL1-217ENST00000583683 FAM217BQ9NTX9 383 aaPredicted RBP21.21■□□□□ 0.99
NDEL1-217ENST00000583683 GOLGA8AA7E2F4 631 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 DTNBO60941 627 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 DDAH1O94760 285 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 TOP1P11387 765 aaKnown RBP21.2■□□□□ 0.98
NDEL1-217ENST00000583683 CDC27P30260 824 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 RAB3GAP1Q15042 981 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 USP48Q86UV5 1035 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 FANCBQ8NB91 859 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 NUP133Q8WUM0 1156 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 ZBTB21Q9ULJ3 1066 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 CTDNEP1O95476 244 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 ADD1P35611 737 aaKnown RBP21.2■□□□□ 0.98
NDEL1-217ENST00000583683 PPP4R3BQ5MIZ7 849 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 SIAH1Q8IUQ4 282 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 ZNF341Q9BYN7 854 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 NMRK2Q9NPI5 230 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 CLIP2Q9UDT6 1046 aa21.2■□□□□ 0.98
NDEL1-217ENST00000583683 DHX16O60231 1041 aaKnown RBP21.19■□□□□ 0.98
NDEL1-217ENST00000583683 CALM1P0DP23 149 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 CALM2P0DP24 149 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 CALM3P0DP25 149 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 EEF2P13639 858 aaKnown RBP21.19■□□□□ 0.98
NDEL1-217ENST00000583683 DDIT3P35638 169 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 DEKP35659 375 aaKnown RBP21.19■□□□□ 0.98
NDEL1-217ENST00000583683 ICA1Q05084 483 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 CDC37L1Q7L3B6 337 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 ZNF526Q8TF50 670 aaPredicted RBP21.19■□□□□ 0.98
NDEL1-217ENST00000583683 LLPHQ9BRT6 129 aaKnown RBP21.19■□□□□ 0.98
NDEL1-217ENST00000583683 GLIS2Q9BZE0 524 aaPredicted RBP21.19■□□□□ 0.98
NDEL1-217ENST00000583683 NYAP2Q9P242 653 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 ZNF112Q9UJU3 913 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 FZD1Q9UP38 647 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 CLEC11AQ9Y240 323 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 DOCK1Q14185 1865 aa21.19■□□□□ 0.98
NDEL1-217ENST00000583683 CTNND1O60716 968 aaKnown RBP21.18■□□□□ 0.98
NDEL1-217ENST00000583683 RTN1Q16799 776 aa21.18■□□□□ 0.98
NDEL1-217ENST00000583683 NSUN7Q8NE18 718 aaKnown RBP21.18■□□□□ 0.98
NDEL1-217ENST00000583683 MKL1Q969V6 931 aa21.18■□□□□ 0.98
NDEL1-217ENST00000583683 CHMP4CQ96CF2 233 aa21.18■□□□□ 0.98
NDEL1-217ENST00000583683 CWC22Q9HCG8 908 aaKnown RBP21.18■□□□□ 0.98
NDEL1-217ENST00000583683 ASNSP08243 561 aa21.18■□□□□ 0.98
NDEL1-217ENST00000583683 LRRC47Q8N1G4 583 aaKnown RBP21.18■□□□□ 0.98
NDEL1-217ENST00000583683 CDCA5Q96FF9 252 aa21.18■□□□□ 0.98
NDEL1-217ENST00000583683 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.18■□□□□ 0.98
NDEL1-217ENST00000583683 SMC3Q9UQE7 1217 aa21.18■□□□□ 0.98
NDEL1-217ENST00000583683 JAK2O60674 1132 aa21.17■□□□□ 0.98
NDEL1-217ENST00000583683 INPP5BP32019 993 aa21.17■□□□□ 0.98
NDEL1-217ENST00000583683 ATP2B2Q01814 1243 aa21.17■□□□□ 0.98
NDEL1-217ENST00000583683 PPP2R5BQ15173 497 aa21.17■□□□□ 0.98
NDEL1-217ENST00000583683 NTRK3Q16288 839 aa21.17■□□□□ 0.98
NDEL1-217ENST00000583683 SMARCC2Q8TAQ2 1214 aa21.17■□□□□ 0.98
NDEL1-217ENST00000583683 KLRG1Q96E93 195 aa21.17■□□□□ 0.98
NDEL1-217ENST00000583683 WRNIP1Q96S55 665 aa21.17■□□□□ 0.98
NDEL1-217ENST00000583683 MAP3K14Q99558 947 aa21.17■□□□□ 0.98
NDEL1-217ENST00000583683 PAPPA2Q9BXP8 1791 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms