RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 ZSWIM5Q9P217 1185 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 DDX60Q8IY21 1712 aaKnown RBP11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 UBA7P41226 1012 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 NLRP12P59046 1061 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 TRIM14Q14142 442 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 NONOQ15233 471 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 CCDC96Q2M329 555 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 PNMA1Q8ND90 353 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 KANSL2Q9H9L4 492 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 KCNG1Q9UIX4 513 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 BICDL2A1A5D9 508 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 KLRG2A4D1S0 409 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 NAPAP54920 295 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 SEPT2Q15019 361 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 TBC1D16Q8TBP0 767 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 IGDCC4Q8TDY8 1250 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 TCEANC2Q96MN5 208 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 TSG101Q99816 390 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 GOPCQ9HD26 462 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 MAST2Q6P0Q8 1798 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 ESYT2A0FGR8 921 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 SCARF1Q14162 830 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 TTC38Q5R3I4 469 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 TBC1D10CQ8IV04 446 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 TTF2Q9UNY4 1162 aaKnown RBP11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 KDM3AQ9Y4C1 1321 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 MYH7P12883 1935 aa11.52□□□□□ -0.56
TRAPPC8-211ENST00000582539 IKBKBO14920 756 aa11.52□□□□□ -0.56
TRAPPC8-211ENST00000582539 U2AF2P26368 475 aaKnown RBP eCLIP11.52□□□□□ -0.567e-8■■■□□ 14.9
TRAPPC8-211ENST00000582539 RBM26Q5T8P6 1007 aaKnown RBP11.52□□□□□ -0.56
TRAPPC8-211ENST00000582539 DAGLBQ8NCG7 672 aa11.52□□□□□ -0.56
TRAPPC8-211ENST00000582539 TFIP11Q9UBB9 837 aaKnown RBP11.52□□□□□ -0.56
TRAPPC8-211ENST00000582539 PI4KBQ9UBF8 816 aa11.52□□□□□ -0.56
TRAPPC8-211ENST00000582539 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.56
TRAPPC8-211ENST00000582539 STX8Q9UNK0 236 aa11.52□□□□□ -0.56
TRAPPC8-211ENST00000582539 BTAF1O14981 1849 aa11.52□□□□□ -0.56
TRAPPC8-211ENST00000582539 DTHD1Q6ZMT9 781 aa11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 LINC00301Q8NCQ3 95 aa11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 CHURC1Q8WUH1 139 aa11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 JAK2O60674 1132 aa11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 TTLL1O95922 423 aa11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 BLIDQ8IZY5 108 aa11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 TTLL6Q8N841 843 aa11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 RIOK1Q9BRS2 568 aaKnown RBP11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 USP40Q9NVE5 1235 aa11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 SERPINA10Q9UK55 444 aa11.52□□□□□ -0.57
TRAPPC8-211ENST00000582539 GPSM2P81274 684 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 IKQ13123 557 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 DCAF15Q66K64 600 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 STOX1Q6ZVD7 989 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 SERPINB13Q9UIV8 391 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 ZDHHC9Q9Y397 364 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 MMP10P09238 476 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 RPS12P25398 132 aaKnown RBP11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 CTR9Q6PD62 1173 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 PCDHA4Q9UN74 947 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 DKC1O60832 514 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 ADCY7P51828 1080 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 GTF2IP78347 998 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 FKBP1CQ5VVH2 108 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 C16orf86Q6ZW13 317 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 GAKO14976 1311 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 POLRMTO00411 1230 aaKnown RBP11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 ZSCAN12O43309 604 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 PFKFB3Q16875 520 aaPredicted RBP11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 TGFBRAP1Q8WUH2 860 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 BCL2L12Q9HB09 334 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 KCNH3Q9ULD8 1083 aa11.51□□□□□ -0.57
TRAPPC8-211ENST00000582539 MPHOSPH10O00566 681 aaKnown RBP11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 CLCN1P35523 988 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 PRPHP41219 470 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 FOSBP53539 338 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 GLIPR1L2Q4G1C9 344 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 TMEM179Q6ZVK1 233 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 FAM160B2Q86V87 743 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 SRPRBQ9Y5M8 271 aaKnown RBP11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 TIAM2Q8IVF5 1701 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 COL24A1Q17RW2 1714 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 SERPINC1P01008 464 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 EIF6P56537 245 aaKnown RBP11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 CEBPZQ03701 1054 aaKnown RBP11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 PPFIBP1Q86W92 1011 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 GPT2Q8TD30 523 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 MRFAP1L1Q96HT8 127 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 NT5C3AQ9H0P0 336 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.5□□□□□ -0.575e-7■□□□□ 11.3
TRAPPC8-211ENST00000582539 ERCC5P28715 1186 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 MYL5Q02045 173 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 AP3B2Q13367 1082 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 DLGAP5Q15398 846 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 AS3MTQ9HBK9 375 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 TMEM63CQ9P1W3 806 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 NDUFB9Q9Y6M9 179 aa11.5□□□□□ -0.57
TRAPPC8-211ENST00000582539 NEDD4P46934 1319 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 ABCD1P33897 745 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 TGFB2P61812 414 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 HAUS3Q68CZ6 603 aa11.49□□□□□ -0.57
TRAPPC8-211ENST00000582539 SARM1Q6SZW1 724 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms