RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ATRNL1Q5VV63 1379 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 GPR75-ASB3A0A0A6YYF3 556 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 IRF6O14896 467 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 PRC1O43663 620 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 INPP5BP32019 993 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 PPP4CP60510 307 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 MLLT1Q03111 559 aaPredicted RBP14.78□□□□□ -0.04
SRSF1-204ENST00000581979 PPATQ06203 517 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 PPIL2Q13356 520 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 MFSD6Q6ZSS7 791 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 CCDC83Q8IWF9 413 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 STAG1Q8WVM7 1258 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 RNF41Q9H4P4 317 aaPredicted RBP14.78□□□□□ -0.04
SRSF1-204ENST00000581979 CNNM2Q9H8M5 875 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 DCP1AQ9NPI6 582 aaPredicted RBP14.78□□□□□ -0.04
SRSF1-204ENST00000581979 NEDD4P46934 1319 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 WDHD1O75717 1129 aaPredicted RBP14.78□□□□□ -0.04
SRSF1-204ENST00000581979 CETPP11597 493 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 PLCG2P16885 1265 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 STK11IPQ8N1F8 1099 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 FAM43AQ8N2R8 423 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 KRT23Q9C075 422 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 ZCCHC17Q9NP64 241 aaKnown RBP14.78□□□□□ -0.04
SRSF1-204ENST00000581979 TOMM22Q9NS69 142 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 ARPP21Q9UBL0 812 aaPredicted RBP14.78□□□□□ -0.04
SRSF1-204ENST00000581979 ANAPC4Q9UJX5 808 aa14.78□□□□□ -0.04
SRSF1-204ENST00000581979 WDR19Q8NEZ3 1342 aa14.77□□□□□ -0.04
SRSF1-204ENST00000581979 B4E1Z4 1266 aa14.77□□□□□ -0.05
SRSF1-204ENST00000581979 RHBDL3P58872 404 aa14.77□□□□□ -0.05
SRSF1-204ENST00000581979 MAP3K10Q02779 954 aa14.77□□□□□ -0.05
SRSF1-204ENST00000581979 SNAPC2Q13487 334 aa14.77□□□□□ -0.05
SRSF1-204ENST00000581979 NOL9Q5SY16 702 aaKnown RBP14.77□□□□□ -0.05
SRSF1-204ENST00000581979 CTR9Q6PD62 1173 aa14.77□□□□□ -0.05
SRSF1-204ENST00000581979 NECAB1Q8N987 351 aa14.77□□□□□ -0.05
SRSF1-204ENST00000581979 ERO1AQ96HE7 468 aa14.77□□□□□ -0.05
SRSF1-204ENST00000581979 USP17L12C9JPN9 530 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 USP17L21D6R901 530 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
SRSF1-204ENST00000581979 ANTXR2P58335 489 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 SP3Q02447 781 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 APOBRQ0VD83 1088 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 STK3Q13188 491 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 RRP12Q5JTH9 1297 aaKnown RBP14.76□□□□□ -0.05
SRSF1-204ENST00000581979 SH3BP5LQ7L8J4 393 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 OTOP1Q7RTM1 612 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 TEX11Q8IYF3 940 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 AGXT2Q9BYV1 514 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 INCENPQ9NQS7 918 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 MCM9Q9NXL9 1143 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 SMC3Q9UQE7 1217 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 HTTP42858 3142 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 FOCADQ5VW36 1801 aa14.76□□□□□ -0.05
SRSF1-204ENST00000581979 CYP2D7A0A087X1C5 515 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 PHF20L1A8MW92 1017 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 SLC3A2P08195 630 aaKnown RBP14.75□□□□□ -0.05
SRSF1-204ENST00000581979 NUCB2P80303 420 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 TAF1CQ15572 869 aaPredicted RBP14.75□□□□□ -0.05
SRSF1-204ENST00000581979 SBK1Q52WX2 424 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 CYB5R4Q7L1T6 521 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 AMOTL1Q8IY63 956 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 FBXL16Q8N461 479 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 TGFBRAP1Q8WUH2 860 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 ZFYVE28Q9HCC9 887 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 DDX4Q9NQI0 724 aaKnown RBP14.75□□□□□ -0.05
SRSF1-204ENST00000581979 NAP1L2Q9ULW6 460 aaPredicted RBP14.75□□□□□ -0.05
SRSF1-204ENST00000581979 KCNH4Q9UQ05 1017 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 TRIM17Q9Y577 477 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 BTBD19C9JJ37 291 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 KDM4AO75164 1064 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 TACC3Q9Y6A5 838 aa14.75□□□□□ -0.05
SRSF1-204ENST00000581979 DDTLA6NHG4 134 aaPredicted RBP14.74□□□□□ -0.05
SRSF1-204ENST00000581979 SOX10P56693 466 aa14.74□□□□□ -0.05
SRSF1-204ENST00000581979 ST3GAL1Q11201 340 aa14.74□□□□□ -0.05
SRSF1-204ENST00000581979 RAB3GAP1Q15042 981 aa14.74□□□□□ -0.05
SRSF1-204ENST00000581979 MAPKAPK5Q8IW41 473 aa14.74□□□□□ -0.05
SRSF1-204ENST00000581979 CD99L2Q8TCZ2 262 aa14.74□□□□□ -0.05
SRSF1-204ENST00000581979 TMEM87BQ96K49 555 aa14.74□□□□□ -0.05
SRSF1-204ENST00000581979 MYH1P12882 1939 aa14.74□□□□□ -0.05
SRSF1-204ENST00000581979 TLR2O60603 784 aa14.73□□□□□ -0.05
SRSF1-204ENST00000581979 CYP2D6P10635 497 aa14.73□□□□□ -0.05
SRSF1-204ENST00000581979 PCP11498 1178 aaKnown RBP14.73□□□□□ -0.05
SRSF1-204ENST00000581979 ZSCAN29Q8IWY8 852 aaPredicted RBP14.73□□□□□ -0.05
SRSF1-204ENST00000581979 NKX2-3Q8TAU0 364 aa14.73□□□□□ -0.05
SRSF1-204ENST00000581979 ESR2Q92731 530 aa14.73□□□□□ -0.05
SRSF1-204ENST00000581979 GTF3C6Q969F1 213 aa14.73□□□□□ -0.05
SRSF1-204ENST00000581979 GPHNQ9NQX3 736 aaPredicted RBP14.73□□□□□ -0.05
SRSF1-204ENST00000581979 ZSWIM5Q9P217 1185 aa14.73□□□□□ -0.05
SRSF1-204ENST00000581979 DDX60LQ5H9U9 1706 aaKnown RBP14.73□□□□□ -0.05
SRSF1-204ENST00000581979 COL2A1P02458 1487 aaPredicted RBP14.73□□□□□ -0.05
SRSF1-204ENST00000581979 KLF18A0A0U1RQI7 1052 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 SMIM22K7EJ46 135 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 SH2B2O14492 632 aaPredicted RBP14.72□□□□□ -0.05
SRSF1-204ENST00000581979 TBC1D12O60347 775 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 PFKFB2O60825 505 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 CAP1Q01518 475 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 PICALMQ13492 652 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 NBR1Q14596 966 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 SCYL3Q8IZE3 742 aa14.72□□□□□ -0.05
SRSF1-204ENST00000581979 ZNF274Q96GC6 653 aaPredicted RBP14.72□□□□□ -0.05
SRSF1-204ENST00000581979 EFCC1Q9HA90 598 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms