RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 CCNJLQ8IV13 435 aa9.3□□□□□ -0.92
PPP4R1-216ENST00000580283 TMEM130Q8N3G9 435 aa9.3□□□□□ -0.92
PPP4R1-216ENST00000580283 DNAJC5GQ8N7S2 189 aa9.3□□□□□ -0.92
PPP4R1-216ENST00000580283 PNPLA7Q6ZV29 1317 aa9.3□□□□□ -0.92
PPP4R1-216ENST00000580283 A0A096LPE4 126 aa9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 A0A1W2PPZ6 126 aa9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 F8W735 103 aaPredicted RBP9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 EXOC5O00471 708 aa9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 C19orf57Q0VDD7 668 aa9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 DUOXA2Q1HG44 320 aa9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 ACAD11Q709F0 780 aa9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 VN1R5Q7Z5H4 357 aa9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 ARHGEF25Q86VW2 580 aa9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 TRPM1Q7Z4N2 1603 aa9.29□□□□□ -0.92
PPP4R1-216ENST00000580283 ADCY9O60503 1353 aa9.28□□□□□ -0.92
PPP4R1-216ENST00000580283 K7ELQ4 463 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-216ENST00000580283 TREHO43280 583 aa9.28□□□□□ -0.92
PPP4R1-216ENST00000580283 ALX3O95076 343 aa9.28□□□□□ -0.92
PPP4R1-216ENST00000580283 TP53INP1Q96A56 240 aa9.28□□□□□ -0.92
PPP4R1-216ENST00000580283 TCF12Q99081 682 aa9.28□□□□□ -0.92
PPP4R1-216ENST00000580283 NLRP2Q9NX02 1062 aa9.28□□□□□ -0.92
PPP4R1-216ENST00000580283 KCNK4Q9NYG8 393 aa9.28□□□□□ -0.92
PPP4R1-216ENST00000580283 USP6P35125 1406 aa9.28□□□□□ -0.92
PPP4R1-216ENST00000580283 SOX1O00570 391 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-216ENST00000580283 DDX3YO15523 660 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-216ENST00000580283 GRIA4P48058 902 aa9.27□□□□□ -0.93
PPP4R1-216ENST00000580283 NLRP12P59046 1061 aa9.27□□□□□ -0.93
PPP4R1-216ENST00000580283 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-216ENST00000580283 ASB16Q96NS5 453 aa9.27□□□□□ -0.93
PPP4R1-216ENST00000580283 PPIP5K1Q6PFW1 1433 aa9.27□□□□□ -0.93
PPP4R1-216ENST00000580283 LY75O60449 1722 aa9.27□□□□□ -0.93
PPP4R1-216ENST00000580283 CPSF1Q10570 1443 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 TNS2Q63HR2 1409 aa9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 PNMA6FA0A0J9YX94 578 aa9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 GLB1P16278 677 aa9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 MAPK8P45983 427 aa9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 DSC3Q14574 896 aa9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 SPRED3Q2MJR0 410 aa9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 AGGF1Q8N302 714 aaeCLIP9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 CLEC4MQ9H2X3 399 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 ABCC6O95255 1503 aa9.26□□□□□ -0.93
PPP4R1-216ENST00000580283 GRIN3BO60391 1043 aa9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 ADAM23O75077 832 aa9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 WISP1O95388 367 aa9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 ESRRAP11474 423 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 PCDH1Q08174 1060 aa9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 SND1Q7KZF4 910 aaKnown RBP eCLIP9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 EPS8L3Q8TE67 593 aaKnown RBP9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 UBASH3BQ8TF42 649 aa9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 ZNF526Q8TF50 670 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 FOXD4L4Q8WXT5 416 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 MEGF10Q96KG7 1140 aa9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 SOX17Q9H6I2 414 aaPredicted RBP9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 PPP4R2Q9NY27 417 aa9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 NFAT5O94916 1531 aa9.25□□□□□ -0.93
PPP4R1-216ENST00000580283 BRD4O60885 1362 aaPredicted RBP9.24□□□□□ -0.93
PPP4R1-216ENST00000580283 TM4SF5O14894 197 aa9.24□□□□□ -0.93
PPP4R1-216ENST00000580283 ADAM11O75078 769 aa9.24□□□□□ -0.93
PPP4R1-216ENST00000580283 POLD1P28340 1107 aa9.24□□□□□ -0.93
PPP4R1-216ENST00000580283 GSTM4Q03013 218 aa9.24□□□□□ -0.93
PPP4R1-216ENST00000580283 ENOX2Q16206 610 aaKnown RBP9.24□□□□□ -0.93
PPP4R1-216ENST00000580283 RSPO4Q2I0M5 234 aaPredicted RBP9.24□□□□□ -0.93
PPP4R1-216ENST00000580283 HGSNATQ68CP4 663 aa9.24□□□□□ -0.93
PPP4R1-216ENST00000580283 SEMA6BQ9H3T3 888 aa9.24□□□□□ -0.93
PPP4R1-216ENST00000580283 KIAA1210Q9ULL0 1709 aa9.23□□□□□ -0.93
PPP4R1-216ENST00000580283 LTN1O94822 1766 aa9.23□□□□□ -0.93
PPP4R1-216ENST00000580283 SSBP4Q9BWG4 385 aaPredicted RBP9.23□□□□□ -0.93
PPP4R1-216ENST00000580283 USP26Q9BXU7 913 aa9.23□□□□□ -0.93
PPP4R1-216ENST00000580283 CEP41Q9BYV8 373 aa9.23□□□□□ -0.93
PPP4R1-216ENST00000580283 CCDC7Q96M83 1385 aa9.23□□□□□ -0.93
PPP4R1-216ENST00000580283 QRICH2Q9H0J4 1663 aa9.23□□□□□ -0.93
PPP4R1-216ENST00000580283 TAF1LQ8IZX4 1826 aa9.22□□□□□ -0.93
PPP4R1-216ENST00000580283 ATP2B2Q01814 1243 aa9.22□□□□□ -0.93
PPP4R1-216ENST00000580283 GRM2Q14416 872 aa9.22□□□□□ -0.93
PPP4R1-216ENST00000580283 NKAPLQ5M9Q1 402 aa9.22□□□□□ -0.93
PPP4R1-216ENST00000580283 PRPF40BQ6NWY9 871 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-216ENST00000580283 KIAA1211Q6ZU35 1233 aa9.22□□□□□ -0.93
PPP4R1-216ENST00000580283 COL23A1Q86Y22 540 aaPredicted RBP9.22□□□□□ -0.93
PPP4R1-216ENST00000580283 DDX54Q8TDD1 881 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-216ENST00000580283 RUSC1Q9BVN2 902 aa9.22□□□□□ -0.93
PPP4R1-216ENST00000580283 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 H2AFB1P0C5Y9 115 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 H2AFB2P0C5Z0 115 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 ITPKAP23677 461 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 FMR1Q06787 632 aaKnown RBP eCLIP9.21□□□□□ -0.942e-6■■■■□ 23.2
PPP4R1-216ENST00000580283 PI16Q6UXB8 463 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 DZIP1LQ8IYY4 767 aaKnown RBP9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 RNF208Q9H0X6 261 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 ZNF576Q9H609 170 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 ABCB6Q9NP58 842 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 TFCP2L1Q9NZI6 479 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 WDR90Q96KV7 1748 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 RGPD2P0DJD1 1756 aa9.21□□□□□ -0.94
PPP4R1-216ENST00000580283 DOT1LQ8TEK3 1739 aa9.2□□□□□ -0.94
PPP4R1-216ENST00000580283 DYRK3O43781 588 aa9.2□□□□□ -0.94
PPP4R1-216ENST00000580283 PTPN12Q05209 780 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-216ENST00000580283 ZNF423Q2M1K9 1284 aa9.2□□□□□ -0.94
PPP4R1-216ENST00000580283 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.2□□□□□ -0.94
PPP4R1-216ENST00000580283 DTHD1Q6ZMT9 781 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms