RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 USP17L22D6RA61 530 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 USP17L17D6RBQ6 530 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 USP17L19D6RCP7 530 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 USP17L20D6RJB6 530 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 INHAP05111 366 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 GABPAQ06546 454 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 USP17L24Q0WX57 530 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 PAGR1Q9BTK6 254 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 KIAA1683Q9H0B3 1180 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 SLC4A4Q9Y6R1 1079 aa28.58■■■□□ 2.17
CDKN2A-214ENST00000579755 CYP2D6P10635 497 aa28.57■■■□□ 2.16
CDKN2A-214ENST00000579755 SEPT2Q15019 361 aa28.57■■■□□ 2.16
CDKN2A-214ENST00000579755 C12orf42Q96LP6 360 aa28.57■■■□□ 2.16
CDKN2A-214ENST00000579755 UNC93B1Q9H1C4 597 aa28.57■■■□□ 2.16
CDKN2A-214ENST00000579755 CWC22Q9HCG8 908 aaKnown RBP28.57■■■□□ 2.16
CDKN2A-214ENST00000579755 GJA8P48165 433 aa28.56■■■□□ 2.16
CDKN2A-214ENST00000579755 ACER1Q8TDN7 264 aa28.56■■■□□ 2.16
CDKN2A-214ENST00000579755 ZBTB47Q9UFB7 747 aaPredicted RBP28.56■■■□□ 2.16
CDKN2A-214ENST00000579755 DYNLL2Q96FJ2 89 aa28.55■■■□□ 2.16
CDKN2A-214ENST00000579755 RBPJLQ9UBG7 517 aa28.55■■■□□ 2.16
CDKN2A-214ENST00000579755 MAPK4P31152 587 aa28.54■■■□□ 2.16
CDKN2A-214ENST00000579755 EVX2Q03828 476 aa28.54■■■□□ 2.16
CDKN2A-214ENST00000579755 U2AF1L4Q8WU68 220 aaKnown RBP28.54■■■□□ 2.16
CDKN2A-214ENST00000579755 TXNRD2Q9NNW7 524 aa28.54■■■□□ 2.16
CDKN2A-214ENST00000579755 PCDHB15Q9Y5E8 787 aa28.54■■■□□ 2.16
CDKN2A-214ENST00000579755 CENPFP49454 3210 aa28.54■■■□□ 2.16
CDKN2A-214ENST00000579755 DOCK3Q8IZD9 2030 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 DDX60LQ5H9U9 1706 aaKnown RBP28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 USP17L12C9JPN9 530 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 USP17L21D6R901 530 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 PEX10O60683 326 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 CHGBP05060 677 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 ERVK-9P63128 1117 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 ERVK-24P63145 666 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 CATSPERGQ6ZRH7 1159 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 TMEM179Q6ZVK1 233 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 SLC44A5Q8NCS7 719 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 NUDT12Q9BQG2 462 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 PUS7LQ9H0K6 701 aaKnown RBP28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 GJD2Q9UKL4 321 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 MYH7P12883 1935 aa28.53■■■□□ 2.16
CDKN2A-214ENST00000579755 TFRCP02786 760 aaKnown RBP28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 VCAM1P19320 739 aa28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 GUCY1A2P33402 732 aa28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 CCNA1P78396 465 aa28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 LRRFIP1Q32MZ4 808 aaKnown RBP28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 C12orf60Q5U649 245 aa28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 TSHZ3Q63HK5 1081 aa28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 KBTBD3Q8NAB2 608 aa28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 GCC1Q96CN9 775 aa28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 RABGAP1Q9Y3P9 1069 aa28.52■■■□□ 2.16
CDKN2A-214ENST00000579755 ERC2O15083 957 aa28.51■■■□□ 2.15
CDKN2A-214ENST00000579755 SGPL1O95470 568 aa28.51■■■□□ 2.15
CDKN2A-214ENST00000579755 HMGCRP04035 888 aa28.51■■■□□ 2.15
CDKN2A-214ENST00000579755 CYP2B6P20813 491 aa28.51■■■□□ 2.15
CDKN2A-214ENST00000579755 Q3C1V9 767 aa28.51■■■□□ 2.15
CDKN2A-214ENST00000579755 SHISA4Q96DD7 197 aa28.51■■■□□ 2.15
CDKN2A-214ENST00000579755 CCDC17Q96LX7 622 aa28.51■■■□□ 2.15
CDKN2A-214ENST00000579755 RPAP3Q9H6T3 665 aaPredicted RBP28.51■■■□□ 2.15
CDKN2A-214ENST00000579755 CDK8P49336 464 aa28.5■■■□□ 2.15
CDKN2A-214ENST00000579755 SOCS4Q8WXH5 440 aa28.5■■■□□ 2.15
CDKN2A-214ENST00000579755 DEFB118Q96PH6 123 aa28.5■■■□□ 2.15
CDKN2A-214ENST00000579755 ARHGEF10LQ9HCE6 1279 aa28.5■■■□□ 2.15
CDKN2A-214ENST00000579755 PPP4R2Q9NY27 417 aa28.5■■■□□ 2.15
CDKN2A-214ENST00000579755 CYP2D7A0A087X1C5 515 aa28.49■■■□□ 2.15
CDKN2A-214ENST00000579755 RNF113AO15541 343 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-214ENST00000579755 ZFYP08048 801 aaPredicted RBP28.49■■■□□ 2.15
CDKN2A-214ENST00000579755 CAPN2P17655 700 aa28.49■■■□□ 2.15
CDKN2A-214ENST00000579755 WDR78Q5VTH9 848 aa28.49■■■□□ 2.15
CDKN2A-214ENST00000579755 DPF3Q92784 378 aa28.49■■■□□ 2.15
CDKN2A-214ENST00000579755 SH2D4AQ9H788 454 aa28.49■■■□□ 2.15
CDKN2A-214ENST00000579755 GTF3C3Q9Y5Q9 886 aa28.49■■■□□ 2.15
CDKN2A-214ENST00000579755 BAZ2AQ9UIF9 1905 aaKnown RBP28.49■■■□□ 2.15
CDKN2A-214ENST00000579755 TTC41PQ6P2S7 1318 aa28.48■■■□□ 2.15
CDKN2A-214ENST00000579755 GLRX3O76003 335 aaKnown RBP28.48■■■□□ 2.15
CDKN2A-214ENST00000579755 CTR9Q6PD62 1173 aa28.48■■■□□ 2.15
CDKN2A-214ENST00000579755 PLEKHH3Q7Z736 793 aa28.48■■■□□ 2.15
CDKN2A-214ENST00000579755 APPBP2Q92624 585 aa28.48■■■□□ 2.15
CDKN2A-214ENST00000579755 STRBPQ96SI9 672 aaKnown RBP28.48■■■□□ 2.15
CDKN2A-214ENST00000579755 ARPP21Q9UBL0 812 aaPredicted RBP28.48■■■□□ 2.15
CDKN2A-214ENST00000579755 AKR1B1P15121 316 aa28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 ICA1Q05084 483 aa28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 C16orf86Q6ZW13 317 aa28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 GPR142Q7Z601 462 aa28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 HTATIP2Q9BUP3 242 aa28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 TANGO6Q9C0B7 1094 aa28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 PORCNQ9H237 461 aa28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 HMX1Q9NP08 348 aaPredicted RBP28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 HOXC10Q9NYD6 342 aa28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 MYH8P13535 1937 aa28.47■■■□□ 2.15
CDKN2A-214ENST00000579755 A0A1W2PRG0 241 aa28.46■■■□□ 2.15
CDKN2A-214ENST00000579755 FARP2O94887 1054 aaPredicted RBP28.46■■■□□ 2.15
CDKN2A-214ENST00000579755 TRMT44Q8IYL2 757 aaKnown RBP28.46■■■□□ 2.15
CDKN2A-214ENST00000579755 APPP05067 770 aa28.45■■■□□ 2.14
CDKN2A-214ENST00000579755 RGS2P41220 211 aa28.45■■■□□ 2.14
CDKN2A-214ENST00000579755 ATP2B2Q01814 1243 aa28.45■■■□□ 2.14
CDKN2A-214ENST00000579755 COG2Q14746 738 aa28.45■■■□□ 2.14
CDKN2A-214ENST00000579755 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.45■■■□□ 2.14
CDKN2A-214ENST00000579755 PAK6Q9NQU5 681 aaPredicted RBP28.45■■■□□ 2.14
CDKN2A-214ENST00000579755 RPTORQ8N122 1335 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms