RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 USP14P54578 494 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 USP17L24Q0WX57 530 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 MAP3K12Q12852 859 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 TTC6Q86TZ1 520 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 LRCH3Q96II8 777 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 FEZ1Q99689 392 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 APBA2Q99767 749 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 MYH1P12882 1939 aa23.39■■□□□ 1.33
CDKN2A-213ENST00000579122 RLBP1P12271 317 aa23.38■■□□□ 1.33
CDKN2A-213ENST00000579122 KIAA1683Q9H0B3 1180 aa23.38■■□□□ 1.33
CDKN2A-213ENST00000579122 PFASO15067 1338 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 CNMDO75829 334 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 GLRX3O76003 335 aaKnown RBP23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 COL6A1P12109 1028 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 CCNA1P78396 465 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 RAB3GAP1Q15042 981 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 ZYXQ15942 572 aaKnown RBP23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 CCL14Q16627 93 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 CERKLQ49MI3 558 aaPredicted RBP23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 LHX8Q68G74 356 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 CATSPERGQ6ZRH7 1159 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 ERC1Q8IUD2 1116 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 ANTXR1Q9H6X2 564 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 CWC22Q9HCG8 908 aaKnown RBP23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 NDUFB9Q9Y6M9 179 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 COL6A3P12111 3177 aa23.37■■□□□ 1.33
CDKN2A-213ENST00000579122 MAP2K5Q13163 448 aa23.36■■□□□ 1.33
CDKN2A-213ENST00000579122 ABCB5Q2M3G0 1257 aa23.36■■□□□ 1.33
CDKN2A-213ENST00000579122 GPR153Q6NV75 609 aa23.36■■□□□ 1.33
CDKN2A-213ENST00000579122 CEP85Q6P2H3 762 aa23.36■■□□□ 1.33
CDKN2A-213ENST00000579122 SYN1P17600 705 aa23.35■■□□□ 1.33
CDKN2A-213ENST00000579122 CCND3P30281 292 aaPredicted RBP23.35■■□□□ 1.33
CDKN2A-213ENST00000579122 LBX2Q6XYB7 198 aa23.35■■□□□ 1.33
CDKN2A-213ENST00000579122 EDC3Q96F86 508 aaKnown RBP23.35■■□□□ 1.33
CDKN2A-213ENST00000579122 RIOK1Q9BRS2 568 aaKnown RBP23.35■■□□□ 1.33
CDKN2A-213ENST00000579122 CABP5Q9NP86 173 aa23.35■■□□□ 1.33
CDKN2A-213ENST00000579122 VCAM1P19320 739 aa23.34■■□□□ 1.33
CDKN2A-213ENST00000579122 SHMT1P34896 483 aa23.34■■□□□ 1.33
CDKN2A-213ENST00000579122 MAGEA10P43363 369 aaPredicted RBP23.34■■□□□ 1.33
CDKN2A-213ENST00000579122 AACSQ86V21 672 aa23.34■■□□□ 1.33
CDKN2A-213ENST00000579122 ACER1Q8TDN7 264 aa23.34■■□□□ 1.33
CDKN2A-213ENST00000579122 SLC15A5A6NIM6 579 aa23.33■■□□□ 1.33
CDKN2A-213ENST00000579122 PLCD1P51178 756 aa23.33■■□□□ 1.33
CDKN2A-213ENST00000579122 EXOC6BQ9Y2D4 811 aa23.33■■□□□ 1.33
CDKN2A-213ENST00000579122 PTPREP23469 700 aa23.32■■□□□ 1.32
CDKN2A-213ENST00000579122 TTF1Q15361 905 aaPredicted RBP23.32■■□□□ 1.32
CDKN2A-213ENST00000579122 LRIT3Q3SXY7 679 aa23.32■■□□□ 1.32
CDKN2A-213ENST00000579122 MFSD14CQ5VZR4 134 aa23.32■■□□□ 1.32
CDKN2A-213ENST00000579122 TDHQ8IZJ6 230 aa23.32■■□□□ 1.32
CDKN2A-213ENST00000579122 MAGEB6P1A0A0J9YX57 407 aa23.31■■□□□ 1.32
CDKN2A-213ENST00000579122 POLR3DP05423 398 aaPredicted RBP23.31■■□□□ 1.32
CDKN2A-213ENST00000579122 HOXC6P09630 235 aa23.31■■□□□ 1.32
CDKN2A-213ENST00000579122 HSP90AB4PQ58FF6 505 aa23.31■■□□□ 1.32
CDKN2A-213ENST00000579122 WDR78Q5VTH9 848 aa23.31■■□□□ 1.32
CDKN2A-213ENST00000579122 BTBD7Q9P203 1132 aa23.31■■□□□ 1.32
CDKN2A-213ENST00000579122 SPDYE16A6NNV3 312 aaPredicted RBP23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 GUCY1A2P33402 732 aa23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 HNRNPUQ00839 825 aaKnown RBP eCLIP23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 GABPAQ06546 454 aa23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 GRB14Q14449 540 aa23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 LRRC26Q2I0M4 334 aa23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 SLC17A8Q8NDX2 589 aa23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 CRNKL1Q9BZJ0 848 aaKnown RBP23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 UBE2OQ9C0C9 1292 aaKnown RBP23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 RPAP3Q9H6T3 665 aaPredicted RBP23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 FLRT1Q9NZU1 646 aa23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 IVNS1ABPQ9Y6Y0 642 aa23.3■■□□□ 1.32
CDKN2A-213ENST00000579122 SLC9C2Q5TAH2 1124 aa23.29■■□□□ 1.32
CDKN2A-213ENST00000579122 RHPN1Q8TCX5 695 aa23.29■■□□□ 1.32
CDKN2A-213ENST00000579122 DNAH12Q6ZR08 3092 aa23.29■■□□□ 1.32
CDKN2A-213ENST00000579122 MSCO60682 206 aa23.28■■□□□ 1.32
CDKN2A-213ENST00000579122 PDE6AP16499 860 aa23.28■■□□□ 1.32
CDKN2A-213ENST00000579122 ATP2B2Q01814 1243 aa23.28■■□□□ 1.32
CDKN2A-213ENST00000579122 SEPT2Q15019 361 aa23.28■■□□□ 1.32
CDKN2A-213ENST00000579122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.28■■□□□ 1.32
CDKN2A-213ENST00000579122 IL1RAPL2Q9NP60 686 aa23.28■■□□□ 1.32
CDKN2A-213ENST00000579122 MCM9Q9NXL9 1143 aa23.28■■□□□ 1.32
CDKN2A-213ENST00000579122 DEFB123Q8N688 67 aa23.27■■□□□ 1.32
CDKN2A-213ENST00000579122 HOXC10Q9NYD6 342 aa23.27■■□□□ 1.32
CDKN2A-213ENST00000579122 DDX20Q9UHI6 824 aaKnown RBP23.27■■□□□ 1.32
CDKN2A-213ENST00000579122 NAV1Q8NEY1 1877 aa23.27■■□□□ 1.32
CDKN2A-213ENST00000579122 A0A0C4DFX4 3053 aa23.26■■□□□ 1.31
CDKN2A-213ENST00000579122 COG2Q14746 738 aa23.26■■□□□ 1.31
CDKN2A-213ENST00000579122 NPLOC4Q8TAT6 608 aa23.26■■□□□ 1.31
CDKN2A-213ENST00000579122 FRMPD3Q5JV73 1810 aa23.26■■□□□ 1.31
CDKN2A-213ENST00000579122 A0A1W2PRG0 241 aa23.25■■□□□ 1.31
CDKN2A-213ENST00000579122 MPHOSPH10O00566 681 aaKnown RBP23.25■■□□□ 1.31
CDKN2A-213ENST00000579122 IGHA2P01877 340 aa23.25■■□□□ 1.31
CDKN2A-213ENST00000579122 CLASRPQ8N2M8 674 aaKnown RBP23.25■■□□□ 1.31
CDKN2A-213ENST00000579122 PANK1Q8TE04 598 aa23.25■■□□□ 1.31
CDKN2A-213ENST00000579122 LPAR1Q92633 364 aa23.25■■□□□ 1.31
CDKN2A-213ENST00000579122 ZNF532Q9HCE3 1301 aa23.25■■□□□ 1.31
CDKN2A-213ENST00000579122 TCRBV5S4A2TA0A5A2 114 aa23.24■■□□□ 1.31
CDKN2A-213ENST00000579122 STRNO43815 780 aa23.24■■□□□ 1.31
CDKN2A-213ENST00000579122 CNGA1P29973 690 aa23.24■■□□□ 1.31
CDKN2A-213ENST00000579122 EVX2Q03828 476 aa23.24■■□□□ 1.31
CDKN2A-213ENST00000579122 KIF1BPQ96EK5 621 aa23.24■■□□□ 1.31
CDKN2A-213ENST00000579122 MOV10L1Q9BXT6 1211 aaKnown RBP23.24■■□□□ 1.31
CDKN2A-213ENST00000579122 SENP6Q9GZR1 1112 aaPredicted RBP23.24■■□□□ 1.31
CDKN2A-213ENST00000579122 DCP1AQ9NPI6 582 aaPredicted RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms