RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 TACC3Q9Y6A5 838 aa18.26■□□□□ 0.51
IFT20-208ENST00000578985 U3KPZ7 1027 aaPredicted RBP18.26■□□□□ 0.51
IFT20-208ENST00000578985 LOC285556D6RIA3 1793 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 C19orf81C9J6K1 198 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 ORC4O43929 436 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 FGRP09769 529 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 HMGCS2P54868 508 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 MTMR2Q13614 643 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 SH3D19Q5HYK7 790 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 AKNAD1Q5T1N1 836 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 TBC1D10CQ8IV04 446 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 FAM43AQ8N2R8 423 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 ACER1Q8TDN7 264 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 FEZ1Q99689 392 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.25■□□□□ 0.51
IFT20-208ENST00000578985 KANSL2Q9H9L4 492 aa18.25■□□□□ 0.51
IFT20-208ENST00000578985 FOXN1O15353 648 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 TFAP4Q01664 338 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 ICA1Q05084 483 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 FAM47AQ5JRC9 791 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 GPAT2Q6NUI2 795 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 MFSD6Q6ZSS7 791 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 ANKRD23Q86SG2 305 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 CLEC10AQ8IUN9 316 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 STAG1Q8WVM7 1258 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 MAP4K1Q92918 833 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 LSG1Q9H089 658 aaKnown RBP18.24■□□□□ 0.51
IFT20-208ENST00000578985 RNF41Q9H4P4 317 aaPredicted RBP18.24■□□□□ 0.51
IFT20-208ENST00000578985 ARHGEF10LQ9HCE6 1279 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 TOMM22Q9NS69 142 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 TMOD4Q9NZQ9 345 aa18.24■□□□□ 0.51
IFT20-208ENST00000578985 RANBP6O60518 1105 aaKnown RBP18.23■□□□□ 0.51
IFT20-208ENST00000578985 TSPY3P0CV98 308 aa18.23■□□□□ 0.51
IFT20-208ENST00000578985 TSPY8P0CW00 308 aa18.23■□□□□ 0.51
IFT20-208ENST00000578985 PCP11498 1178 aaKnown RBP18.23■□□□□ 0.51
IFT20-208ENST00000578985 RRP12Q5JTH9 1297 aaKnown RBP18.23■□□□□ 0.51
IFT20-208ENST00000578985 USP17L2Q6R6M4 530 aa18.23■□□□□ 0.51
IFT20-208ENST00000578985 SIAH1Q8IUQ4 282 aa18.23■□□□□ 0.51
IFT20-208ENST00000578985 PROCA1Q8NCQ7 364 aaPredicted RBP18.23■□□□□ 0.51
IFT20-208ENST00000578985 NEDD1Q8NHV4 660 aa18.23■□□□□ 0.51
IFT20-208ENST00000578985 KIAA1683Q9H0B3 1180 aa18.23■□□□□ 0.51
IFT20-208ENST00000578985 ZCCHC17Q9NP64 241 aaKnown RBP18.23■□□□□ 0.51
IFT20-208ENST00000578985 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
IFT20-208ENST00000578985 TSKSQ9UJT2 592 aa18.23■□□□□ 0.51
IFT20-208ENST00000578985 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
IFT20-208ENST00000578985 MYH4Q9Y623 1939 aa18.23■□□□□ 0.51
IFT20-208ENST00000578985 PLIN4Q96Q06 1357 aa18.22■□□□□ 0.51
IFT20-208ENST00000578985 IGKV6D-41A0A0C4DH26 115 aa18.22■□□□□ 0.51
IFT20-208ENST00000578985 TSPY2A6NKD2 308 aa18.22■□□□□ 0.51
IFT20-208ENST00000578985 PDHXO00330 501 aa18.22■□□□□ 0.51
IFT20-208ENST00000578985 TBC1D8O95759 1140 aa18.22■□□□□ 0.51
IFT20-208ENST00000578985 EEF2P13639 858 aaKnown RBP18.22■□□□□ 0.51
IFT20-208ENST00000578985 CTCFP49711 727 aaPredicted RBP18.22■□□□□ 0.51
IFT20-208ENST00000578985 ATP2B2Q01814 1243 aa18.22■□□□□ 0.51
IFT20-208ENST00000578985 DGKZQ13574 1117 aa18.22■□□□□ 0.51
IFT20-208ENST00000578985 TAF1CQ15572 869 aaPredicted RBP18.22■□□□□ 0.51
IFT20-208ENST00000578985 ZYXQ15942 572 aaKnown RBP18.22■□□□□ 0.51
IFT20-208ENST00000578985 EMILIN3Q9NT22 766 aa18.22■□□□□ 0.51
IFT20-208ENST00000578985 AGTPBP1Q9UPW5 1226 aa18.22■□□□□ 0.51
IFT20-208ENST00000578985 A0A1W2PRG0 241 aa18.21■□□□□ 0.51
IFT20-208ENST00000578985 CAPN15O75808 1086 aa18.21■□□□□ 0.51
IFT20-208ENST00000578985 HSPA8P11142 646 aaKnown RBP18.21■□□□□ 0.51
IFT20-208ENST00000578985 USP14P54578 494 aa18.21■□□□□ 0.51
IFT20-208ENST00000578985 TREML2Q5T2D2 321 aa18.21■□□□□ 0.51
IFT20-208ENST00000578985 CEP95Q96GE4 821 aa18.21■□□□□ 0.51
IFT20-208ENST00000578985 CFHR5Q9BXR6 569 aa18.21■□□□□ 0.51
IFT20-208ENST00000578985 SH2D4AQ9H788 454 aa18.21■□□□□ 0.51
IFT20-208ENST00000578985 SLC45A1Q9Y2W3 748 aa18.21■□□□□ 0.51
IFT20-208ENST00000578985 GTF3C3Q9Y5Q9 886 aa18.21■□□□□ 0.51
IFT20-208ENST00000578985 CRHR2Q13324 411 aa18.2■□□□□ 0.5
IFT20-208ENST00000578985 C12orf42Q96LP6 360 aa18.2■□□□□ 0.5
IFT20-208ENST00000578985 R3HDMLQ9H3Y0 253 aa18.2■□□□□ 0.5
IFT20-208ENST00000578985 ZFYVE28Q9HCC9 887 aa18.2■□□□□ 0.5
IFT20-208ENST00000578985 MTMR4Q9NYA4 1195 aa18.2■□□□□ 0.5
IFT20-208ENST00000578985 NYAP2Q9P242 653 aa18.2■□□□□ 0.5
IFT20-208ENST00000578985 TMX2Q9Y320 296 aa18.2■□□□□ 0.5
IFT20-208ENST00000578985 NEDD4P46934 1319 aa18.2■□□□□ 0.5
IFT20-208ENST00000578985 CYP21A2P08686 494 aa18.19■□□□□ 0.5
IFT20-208ENST00000578985 PABPC4Q13310 644 aaKnown RBP eCLIP18.19■□□□□ 0.5
IFT20-208ENST00000578985 PPP4R3BQ5MIZ7 849 aa18.19■□□□□ 0.5
IFT20-208ENST00000578985 ESR2Q92731 530 aa18.19■□□□□ 0.5
IFT20-208ENST00000578985 CLIP2Q9UDT6 1046 aa18.19■□□□□ 0.5
IFT20-208ENST00000578985 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
IFT20-208ENST00000578985 TTLL1O95922 423 aa18.18■□□□□ 0.5
IFT20-208ENST00000578985 NT5C2P49902 561 aa18.18■□□□□ 0.5
IFT20-208ENST00000578985 LBX1P52954 281 aa18.18■□□□□ 0.5
IFT20-208ENST00000578985 PARK7Q99497 189 aaKnown RBP18.18■□□□□ 0.5
IFT20-208ENST00000578985 KRT23Q9C075 422 aa18.18■□□□□ 0.5
IFT20-208ENST00000578985 VCPKMTQ9H867 229 aa18.18■□□□□ 0.5
IFT20-208ENST00000578985 CNNM2Q9H8M5 875 aa18.18■□□□□ 0.5
IFT20-208ENST00000578985 IL17RBQ9NRM6 502 aa18.18■□□□□ 0.5
IFT20-208ENST00000578985 B4E1Z4 1266 aa18.17■□□□□ 0.5
IFT20-208ENST00000578985 KDM4AO75164 1064 aa18.17■□□□□ 0.5
IFT20-208ENST00000578985 OSBPP22059 807 aa18.17■□□□□ 0.5
IFT20-208ENST00000578985 NKX2-3Q8TAU0 364 aa18.17■□□□□ 0.5
IFT20-208ENST00000578985 MKL1Q969V6 931 aa18.17■□□□□ 0.5
IFT20-208ENST00000578985 TCP11L1Q9NUJ3 509 aa18.17■□□□□ 0.5
IFT20-208ENST00000578985 PNMA3Q9UL41 463 aa18.17■□□□□ 0.5
IFT20-208ENST00000578985 GPR25O00155 361 aa18.16■□□□□ 0.5
IFT20-208ENST00000578985 SLC27A2O14975 620 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms