RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 XBP1P17861 261 aa20.12■□□□□ 0.81
ERBB2-205ENST00000578199 UBASH3AP57075 661 aa20.12■□□□□ 0.81
ERBB2-205ENST00000578199 ZNF174Q15697 407 aa20.12■□□□□ 0.81
ERBB2-205ENST00000578199 DZIP1Q86YF9 867 aaKnown RBP20.12■□□□□ 0.81
ERBB2-205ENST00000578199 ZNF831Q5JPB2 1677 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 TSPY2A6NKD2 308 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 CASP1P29466 404 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 RFC4P35249 363 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 GSDMDP57764 484 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 GOLGA8FQ08AF8 430 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 GOLGA8DPQ0D2H9 430 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 PPP2R5BQ15173 497 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 CEP135Q66GS9 1140 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 TMTC3Q6ZXV5 915 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 IMPACTQ9P2X3 320 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 USP21Q9UK80 565 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 TRIM75PA6NK02 468 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 TMEM232C9JQI7 657 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 DIXDC1Q155Q3 683 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 NPY5RQ15761 445 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 DYNLL2Q96FJ2 89 aa20.11■□□□□ 0.81
ERBB2-205ENST00000578199 UBAP1LF5GYI3 381 aa20.1■□□□□ 0.81
ERBB2-205ENST00000578199 FMR1Q06787 632 aaKnown RBP eCLIP20.1■□□□□ 0.81
ERBB2-205ENST00000578199 CFAP100Q494V2 611 aa20.1■□□□□ 0.81
ERBB2-205ENST00000578199 TRMT44Q8IYL2 757 aaKnown RBP20.1■□□□□ 0.81
ERBB2-205ENST00000578199 CCAR2Q8N163 923 aaKnown RBP20.1■□□□□ 0.81
ERBB2-205ENST00000578199 DHX58Q96C10 678 aa20.1■□□□□ 0.81
ERBB2-205ENST00000578199 ATP8A2Q9NTI2 1148 aa20.1■□□□□ 0.81
ERBB2-205ENST00000578199 RBM28Q9NW13 759 aaKnown RBP20.1■□□□□ 0.81
ERBB2-205ENST00000578199 CEP131Q9UPN4 1083 aa20.1■□□□□ 0.81
ERBB2-205ENST00000578199 CNTNAP5Q8WYK1 1306 aa20.1■□□□□ 0.81
ERBB2-205ENST00000578199 IRS2Q9Y4H2 1338 aa20.1■□□□□ 0.81
ERBB2-205ENST00000578199 ACTN4O43707 911 aaKnown RBP20.09■□□□□ 0.81
ERBB2-205ENST00000578199 ORC4O43929 436 aa20.09■□□□□ 0.81
ERBB2-205ENST00000578199 NAA30Q147X3 362 aaPredicted RBP20.09■□□□□ 0.81
ERBB2-205ENST00000578199 PTPN14Q15678 1187 aa20.09■□□□□ 0.81
ERBB2-205ENST00000578199 CTCFLQ8NI51 663 aaPredicted RBP20.09■□□□□ 0.81
ERBB2-205ENST00000578199 CALM1P0DP23 149 aa20.09■□□□□ 0.81
ERBB2-205ENST00000578199 CALM2P0DP24 149 aa20.09■□□□□ 0.81
ERBB2-205ENST00000578199 CALM3P0DP25 149 aa20.09■□□□□ 0.81
ERBB2-205ENST00000578199 SFPQP23246 707 aaKnown RBP eCLIP20.09■□□□□ 0.81
ERBB2-205ENST00000578199 AFMP43652 599 aa20.09■□□□□ 0.81
ERBB2-205ENST00000578199 RCSD1Q6JBY9 416 aa20.09■□□□□ 0.81
ERBB2-205ENST00000578199 FAM196AQ6ZSG2 479 aa20.09■□□□□ 0.81
ERBB2-205ENST00000578199 ZNF579Q8NAF0 562 aaKnown RBP20.09■□□□□ 0.81
ERBB2-205ENST00000578199 SH3RF3Q8TEJ3 882 aaPredicted RBP20.09■□□□□ 0.81
ERBB2-205ENST00000578199 TNRC6CQ9HCJ0 1690 aaKnown RBP20.09■□□□□ 0.81
ERBB2-205ENST00000578199 MTMR7Q9Y216 660 aa20.09■□□□□ 0.81
ERBB2-205ENST00000578199 DDAH1O94760 285 aa20.08■□□□□ 0.81
ERBB2-205ENST00000578199 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.81
ERBB2-205ENST00000578199 E4F1Q66K89 784 aaPredicted RBP20.08■□□□□ 0.81
ERBB2-205ENST00000578199 NYAP1Q6ZVC0 841 aa20.08■□□□□ 0.81
ERBB2-205ENST00000578199 SMARCE1Q969G3 411 aa20.08■□□□□ 0.81
ERBB2-205ENST00000578199 GOLGB1Q14789 3259 aaKnown RBP20.08■□□□□ 0.81
ERBB2-205ENST00000578199 PCP11498 1178 aaKnown RBP20.08■□□□□ 0.8
ERBB2-205ENST00000578199 SARSP49591 514 aaKnown RBP20.08■□□□□ 0.8
ERBB2-205ENST00000578199 TFAP4Q01664 338 aa20.08■□□□□ 0.8
ERBB2-205ENST00000578199 FNBP4Q8N3X1 1017 aaPredicted RBP20.08■□□□□ 0.8
ERBB2-205ENST00000578199 PODXL2Q9NZ53 605 aa20.08■□□□□ 0.8
ERBB2-205ENST00000578199 ARPP21Q9UBL0 812 aaPredicted RBP20.08■□□□□ 0.8
ERBB2-205ENST00000578199 USP5P45974 858 aa20.07■□□□□ 0.8
ERBB2-205ENST00000578199 SYMPKQ92797 1274 aaKnown RBP20.07■□□□□ 0.8
ERBB2-205ENST00000578199 TNFRSF25Q93038 417 aa20.07■□□□□ 0.8
ERBB2-205ENST00000578199 MED15Q96RN5 788 aa20.07■□□□□ 0.8
ERBB2-205ENST00000578199 IL17RBQ9NRM6 502 aa20.07■□□□□ 0.8
ERBB2-205ENST00000578199 HOOK1Q9UJC3 728 aaKnown RBP20.07■□□□□ 0.8
ERBB2-205ENST00000578199 COL24A1Q17RW2 1714 aa20.07■□□□□ 0.8
ERBB2-205ENST00000578199 PDS5AQ29RF7 1337 aaKnown RBP20.07■□□□□ 0.8
ERBB2-205ENST00000578199 LDHBP07195 334 aaKnown RBP20.07■□□□□ 0.8
ERBB2-205ENST00000578199 PIK3AP1Q6ZUJ8 805 aa20.07■□□□□ 0.8
ERBB2-205ENST00000578199 STAMQ92783 540 aa20.07■□□□□ 0.8
ERBB2-205ENST00000578199 RGL2O15211 777 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 CTIFO43310 598 aaKnown RBP20.06■□□□□ 0.8
ERBB2-205ENST00000578199 STAG2Q8N3U4 1231 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 MAP7D2Q96T17 732 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 INTS13Q9NVM9 706 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 VWA3AA6NCI4 1184 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 USP17L3A6NCW0 530 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 USP17L4A6NCW7 530 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 NLRP5P59047 1200 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 PTGDRQ13258 359 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 MORC3Q14149 939 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 NT5DC1Q5TFE4 455 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 USP17L1Q7RTZ2 530 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 SLC44A5Q8NCS7 719 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 CCDC150Q8NCX0 1101 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 CCDC112Q8NEF3 446 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 LRRC4BQ9NT99 713 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 NFE2L3Q9Y4A8 694 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 CCDC88AQ3V6T2 1871 aa20.06■□□□□ 0.8
ERBB2-205ENST00000578199 DLEC1Q9Y238 1755 aa20.05■□□□□ 0.8
ERBB2-205ENST00000578199 TGFBRAP1Q8WUH2 860 aa20.05■□□□□ 0.8
ERBB2-205ENST00000578199 GPKOWQ92917 476 aaPredicted RBP eCLIP20.05■□□□□ 0.8
ERBB2-205ENST00000578199 PAXBP1Q9Y5B6 917 aa20.05■□□□□ 0.8
ERBB2-205ENST00000578199 SCG2P13521 617 aa20.05■□□□□ 0.8
ERBB2-205ENST00000578199 GRAPQ13588 217 aa20.05■□□□□ 0.8
ERBB2-205ENST00000578199 TTC38Q5R3I4 469 aa20.05■□□□□ 0.8
ERBB2-205ENST00000578199 ELOA2Q8IYF1 753 aaPredicted RBP20.05■□□□□ 0.8
ERBB2-205ENST00000578199 CNBD1Q8NA66 436 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms