RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 MYL10Q9BUA6 226 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 MRIQ9BWK5 157 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 STK32BQ9NY57 414 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 MKRN1Q9UHC7 482 aaKnown RBP7.82□□□□□ -1.16
SMG6-217ENST00000575338 DACH1Q9UI36 760 aa7.82□□□□□ -1.16
SMG6-217ENST00000575338 SMTNL1A8MU46 457 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 ADCY5O95622 1261 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 HLA-DOAP06340 250 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 SCG2P13521 617 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 HDLBPQ00341 1268 aaKnown RBP7.81□□□□□ -1.16
SMG6-217ENST00000575338 TFAP4Q01664 338 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 SNW1Q13573 536 aaKnown RBP7.81□□□□□ -1.16
SMG6-217ENST00000575338 OTUD7BQ6GQQ9 843 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 HHIPL2Q6UWX4 724 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 C16orf86Q6ZW13 317 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 COL23A1Q86Y22 540 aaPredicted RBP7.81□□□□□ -1.16
SMG6-217ENST00000575338 CKAP2LQ8IYA6 745 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 STK11IPQ8N1F8 1099 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 PROM2Q8N271 834 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 PNMA1Q8ND90 353 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 TGFBRAP1Q8WUH2 860 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 PHF20Q9BVI0 1012 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 SENP2Q9HC62 589 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 INCENPQ9NQS7 918 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 POLLQ9UGP5 575 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 ZKSCAN5Q9Y2L8 839 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 CLIC4Q9Y696 253 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 MRVI1Q9Y6F6 885 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 PLIN4Q96Q06 1357 aa7.81□□□□□ -1.16
SMG6-217ENST00000575338 CNTNAP5Q8WYK1 1306 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 WTIPA6NIX2 430 aaPredicted RBP7.8□□□□□ -1.16
SMG6-217ENST00000575338 TRIM75PA6NK02 468 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 KIF28PB7ZC32 967 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 NRDCO43847 1150 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 PRDM1O75626 825 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 ZNF202O95125 648 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 MMP10P09238 476 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 USP17L8P0C7I0 530 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 TOP1P11387 765 aaKnown RBP7.8□□□□□ -1.16
SMG6-217ENST00000575338 PFKFB1P16118 471 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 NLRP5P59047 1200 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 GTF2IP78347 998 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 PLCB2Q00722 1185 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 SF3B2Q13435 895 aaKnown RBP7.8□□□□□ -1.16
SMG6-217ENST00000575338 GRM4Q14833 912 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 PTPAQ15257 358 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 PFKFB3Q16875 520 aaPredicted RBP7.8□□□□□ -1.16
SMG6-217ENST00000575338 ZNF827Q17R98 1081 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 CT47A1Q5JQC4 288 aaPredicted RBP7.8□□□□□ -1.16
SMG6-217ENST00000575338 RESP18Q5W5W9 173 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 SARM1Q6SZW1 724 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 OLFM4Q6UX06 510 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 NEDD1Q8NHV4 660 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 TEKT1Q969V4 418 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 DHX36Q9H2U1 1008 aaKnown RBP7.8□□□□□ -1.16
SMG6-217ENST00000575338 KIAA1468Q9P260 1216 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 SEC63Q9UGP8 760 aaKnown RBP7.8□□□□□ -1.16
SMG6-217ENST00000575338 TACC3Q9Y6A5 838 aa7.8□□□□□ -1.16
SMG6-217ENST00000575338 FLT1P17948 1338 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 CYP2D7A0A087X1C5 515 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 A0A1B0GVL5 298 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 BTBD18B2RXH4 712 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 LAD1O00515 517 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 ZNF500O60304 480 aaPredicted RBP7.79□□□□□ -1.16
SMG6-217ENST00000575338 NEMFO60524 1076 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 DTNBO60941 627 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 PPFIA3O75145 1194 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 NPM3O75607 178 aaKnown RBP7.79□□□□□ -1.16
SMG6-217ENST00000575338 SMC2O95347 1197 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 PARP1P09874 1014 aaKnown RBP7.79□□□□□ -1.16
SMG6-217ENST00000575338 PTPREP23469 700 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 GNA11P29992 359 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 CDC25BP30305 580 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 TXLNAP40222 546 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 CDK8P49336 464 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 NDUFA8P51970 172 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 NLRP12P59046 1061 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 ORC2Q13416 577 aaPredicted RBP7.79□□□□□ -1.16
SMG6-217ENST00000575338 DIXDC1Q155Q3 683 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 FAM47AQ5JRC9 791 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 AXDND1Q5T1B0 1012 aaPredicted RBP7.79□□□□□ -1.16
SMG6-217ENST00000575338 STRIP1Q5VSL9 837 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.79□□□□□ -1.16
SMG6-217ENST00000575338 C2CD5Q86YS7 1000 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 MAPKAPK5Q8IW41 473 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 CCDC82Q8N4S0 544 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 TRIML1Q8N9V2 468 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 CNNM3Q8NE01 707 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 FBXW7Q969H0 707 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 CCDC17Q96LX7 622 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 AIFM3Q96NN9 605 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 SPZ1Q9BXG8 430 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 TRIM5Q9C035 493 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 VPS33BQ9H267 617 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 GOLPH3LQ9H4A5 285 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 CBX8Q9HC52 389 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 STX8Q9UNK0 236 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 TTF2Q9UNY4 1162 aaKnown RBP7.79□□□□□ -1.16
SMG6-217ENST00000575338 HPSEQ9Y251 543 aa7.79□□□□□ -1.16
SMG6-217ENST00000575338 SRPRBQ9Y5M8 271 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms