RNA–Protein interactions for RNA: ENST00000574494.1

TRAP1-210, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-210ENST00000574494 MBD3O95983 291 aa16.29■□□□□ 0.2
TRAP1-210ENST00000574494 TOP1P11387 765 aaKnown RBP16.29■□□□□ 0.2
TRAP1-210ENST00000574494 LMNB1P20700 586 aa16.29■□□□□ 0.2
TRAP1-210ENST00000574494 CDC27P30260 824 aa16.29■□□□□ 0.2
TRAP1-210ENST00000574494 TCP10Q12799 353 aa16.29■□□□□ 0.2
TRAP1-210ENST00000574494 TROAPQ12815 778 aa16.29■□□□□ 0.2
TRAP1-210ENST00000574494 ATL3Q6DD88 541 aa16.29■□□□□ 0.2
TRAP1-210ENST00000574494 LZTS2Q9BRK4 669 aa16.29■□□□□ 0.2
TRAP1-210ENST00000574494 ALG1Q9BT22 464 aa16.29■□□□□ 0.2
TRAP1-210ENST00000574494 ZNF70Q9UC06 446 aaPredicted RBP16.29■□□□□ 0.2
TRAP1-210ENST00000574494 HERC5Q9UII4 1024 aaKnown RBP16.29■□□□□ 0.2
TRAP1-210ENST00000574494 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
TRAP1-210ENST00000574494 ZNF280AP59817 542 aaPredicted RBP16.28■□□□□ 0.2
TRAP1-210ENST00000574494 SAFBQ15424 915 aaKnown RBP eCLIP16.28■□□□□ 0.2
TRAP1-210ENST00000574494 NTRK3Q16288 839 aa16.28■□□□□ 0.2
TRAP1-210ENST00000574494 RCSD1Q6JBY9 416 aa16.28■□□□□ 0.2
TRAP1-210ENST00000574494 TMTC3Q6ZXV5 915 aa16.28■□□□□ 0.2
TRAP1-210ENST00000574494 BRAPQ7Z569 592 aa16.28■□□□□ 0.2
TRAP1-210ENST00000574494 FAM83AQ86UY5 434 aa16.28■□□□□ 0.2
TRAP1-210ENST00000574494 TMEM87AQ8NBN3 555 aa16.28■□□□□ 0.2
TRAP1-210ENST00000574494 FAM151AQ8WW52 585 aa16.28■□□□□ 0.2
TRAP1-210ENST00000574494 PRMT6Q96LA8 375 aaPredicted RBP16.28■□□□□ 0.2
TRAP1-210ENST00000574494 MYOZ2Q9NPC6 264 aa16.28■□□□□ 0.2
TRAP1-210ENST00000574494 NMT2O60551 498 aa16.27■□□□□ 0.2
TRAP1-210ENST00000574494 FDPSP14324 419 aaKnown RBP16.27■□□□□ 0.2
TRAP1-210ENST00000574494 SHMT1P34896 483 aa16.27■□□□□ 0.2
TRAP1-210ENST00000574494 CACNB3P54284 484 aa16.27■□□□□ 0.2
TRAP1-210ENST00000574494 GNL2Q13823 731 aaKnown RBP16.27■□□□□ 0.2
TRAP1-210ENST00000574494 GRM4Q14833 912 aa16.27■□□□□ 0.2
TRAP1-210ENST00000574494 ARHGAP27Q6ZUM4 889 aa16.27■□□□□ 0.2
TRAP1-210ENST00000574494 FBXO18Q8NFZ0 1043 aa16.27■□□□□ 0.2
TRAP1-210ENST00000574494 CSRNP1Q96S65 589 aa16.27■□□□□ 0.2
TRAP1-210ENST00000574494 SCAND2PQ9GZW5 306 aaPredicted RBP16.27■□□□□ 0.2
TRAP1-210ENST00000574494 IL17RBQ9NRM6 502 aa16.27■□□□□ 0.2
TRAP1-210ENST00000574494 FAM217BQ9NTX9 383 aaPredicted RBP16.27■□□□□ 0.2
TRAP1-210ENST00000574494 CFAP45Q9UL16 551 aa16.27■□□□□ 0.2
TRAP1-210ENST00000574494 TRAK2O60296 914 aa16.26■□□□□ 0.19
TRAP1-210ENST00000574494 TTLL1O95922 423 aa16.26■□□□□ 0.19
TRAP1-210ENST00000574494 NOVP48745 357 aa16.26■□□□□ 0.19
TRAP1-210ENST00000574494 RESTQ13127 1097 aa16.26■□□□□ 0.19
TRAP1-210ENST00000574494 FERMT3Q86UX7 667 aa16.26■□□□□ 0.19
TRAP1-210ENST00000574494 METTL16Q86W50 562 aaKnown RBP16.26■□□□□ 0.19
TRAP1-210ENST00000574494 FAM177A1Q8N128 213 aaPredicted RBP16.26■□□□□ 0.19
TRAP1-210ENST00000574494 PHKBQ93100 1093 aa16.26■□□□□ 0.19
TRAP1-210ENST00000574494 ZNF396Q96N95 335 aaPredicted RBP16.26■□□□□ 0.19
TRAP1-210ENST00000574494 VEZTQ9HBM0 779 aa16.26■□□□□ 0.19
TRAP1-210ENST00000574494 PCDHAC2Q9Y5I4 1007 aa16.26■□□□□ 0.19
TRAP1-210ENST00000574494 CLRN2A0PK11 232 aa16.25■□□□□ 0.19
TRAP1-210ENST00000574494 MPHOSPH10O00566 681 aaKnown RBP16.25■□□□□ 0.19
TRAP1-210ENST00000574494 PRPF3O43395 683 aaKnown RBP16.25■□□□□ 0.19
TRAP1-210ENST00000574494 AKR1B1P15121 316 aa16.25■□□□□ 0.19
TRAP1-210ENST00000574494 GMPSP49915 693 aaPredicted RBP16.25■□□□□ 0.19
TRAP1-210ENST00000574494 FOSBP53539 338 aa16.25■□□□□ 0.19
TRAP1-210ENST00000574494 CERKLQ49MI3 558 aaPredicted RBP16.25■□□□□ 0.19
TRAP1-210ENST00000574494 TMEM179Q6ZVK1 233 aa16.25■□□□□ 0.19
TRAP1-210ENST00000574494 CEP95Q96GE4 821 aa16.25■□□□□ 0.19
TRAP1-210ENST00000574494 ZBED3Q96IU2 234 aaPredicted RBP16.25■□□□□ 0.19
TRAP1-210ENST00000574494 TMEM47Q9BQJ4 181 aa16.25■□□□□ 0.19
TRAP1-210ENST00000574494 BRMS1Q9HCU9 246 aa16.25■□□□□ 0.19
TRAP1-210ENST00000574494 MTMR4Q9NYA4 1195 aa16.25■□□□□ 0.19
TRAP1-210ENST00000574494 GJA3Q9Y6H8 435 aa16.25■□□□□ 0.19
TRAP1-210ENST00000574494 DDX49Q9Y6V7 483 aaKnown RBP16.25■□□□□ 0.19
TRAP1-210ENST00000574494 ELP1O95163 1332 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 CNTNAP5Q8WYK1 1306 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 IGKV6D-41A0A0C4DH26 115 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 DDTLA6NHG4 134 aaPredicted RBP16.24■□□□□ 0.19
TRAP1-210ENST00000574494 TCP10L2B9ZVM9 353 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 H7C1D1 291 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 PARP1P09874 1014 aaKnown RBP16.24■□□□□ 0.19
TRAP1-210ENST00000574494 KLHL40Q2TBA0 621 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 ASPRV1Q53RT3 343 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 NBPF11Q86T75 865 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 MICALL2Q8IY33 904 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 GPC2Q8N158 579 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 CABP5Q9NP86 173 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 ATAD5Q96QE3 1844 aa16.24■□□□□ 0.19
TRAP1-210ENST00000574494 WNT10BO00744 389 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 FIBPO43427 364 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 PRPF40AO75400 957 aaKnown RBP16.23■□□□□ 0.19
TRAP1-210ENST00000574494 DNM1Q05193 864 aaKnown RBP16.23■□□□□ 0.19
TRAP1-210ENST00000574494 KRT40Q6A162 431 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 TATDN1Q6P1N9 297 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 SYAP1Q96A49 352 aaPredicted RBP16.23■□□□□ 0.19
TRAP1-210ENST00000574494 HOOK2Q96ED9 719 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 SYT17Q9BSW7 474 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 LMBRD1Q9NUN5 540 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 SYNPO2Q9UMS6 1093 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 CNPY2Q9Y2B0 182 aa16.23■□□□□ 0.19
TRAP1-210ENST00000574494 ZNF541Q9H0D2 1346 aa16.22■□□□□ 0.19
TRAP1-210ENST00000574494 SMARCA1P28370 1054 aa16.22■□□□□ 0.19
TRAP1-210ENST00000574494 GUCY1B3Q02153 619 aa16.22■□□□□ 0.19
TRAP1-210ENST00000574494 ABCB5Q2M3G0 1257 aa16.22■□□□□ 0.19
TRAP1-210ENST00000574494 KIF4BQ2VIQ3 1234 aa16.22■□□□□ 0.19
TRAP1-210ENST00000574494 FOXD4L6Q3SYB3 417 aaPredicted RBP16.22■□□□□ 0.19
TRAP1-210ENST00000574494 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
TRAP1-210ENST00000574494 FOXD4L3Q6VB84 417 aaPredicted RBP16.22■□□□□ 0.19
TRAP1-210ENST00000574494 SH3BP5LQ7L8J4 393 aa16.22■□□□□ 0.19
TRAP1-210ENST00000574494 APOBEC3FQ8IUX4 373 aaKnown RBP16.22■□□□□ 0.19
TRAP1-210ENST00000574494 ZFPM1Q8IX07 1006 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms