RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 SLC3A2P08195 630 aaKnown RBP18.36■□□□□ 0.53
USP43-204ENST00000573955 BTDP43251 543 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 NDUFA8P51970 172 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 FAM160A1Q05DH4 1040 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 PDE4BQ07343 736 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 SLC44A5Q8NCS7 719 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 KCNG4Q8TDN1 519 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 CRAMP1Q96RY5 1269 aa18.36■□□□□ 0.53
USP43-204ENST00000573955 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
USP43-204ENST00000573955 YEATS4O95619 227 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 ADCY5O95622 1261 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 BAG3O95817 575 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 PRR29P0C7W0 189 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 CHRNA5P30532 468 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 GSTO1P78417 241 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 ADALQ6DHV7 355 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 DIS3L2Q8IYB7 885 aaKnown RBP18.35■□□□□ 0.53
USP43-204ENST00000573955 WASF1Q92558 559 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 MTA3Q9BTC8 594 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 DNAJC25Q9H1X3 360 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 MTMR7Q9Y216 660 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 DEXIO95424 95 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 FGRP09769 529 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 ATP2B1P20020 1258 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 GTF2IP78347 998 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 NR5A1Q13285 461 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 UVSSAQ2YD98 709 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 NLGN1Q8N2Q7 840 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 ENGASEQ8NFI3 743 aa18.35■□□□□ 0.53
USP43-204ENST00000573955 MROH7-TTC4A0A0A0MT08 1334 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 NID2Q14112 1375 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 AP5Z1O43299 807 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 WDHD1O75717 1129 aaPredicted RBP18.34■□□□□ 0.53
USP43-204ENST00000573955 AKAP17AQ02040 695 aaKnown RBP18.34■□□□□ 0.53
USP43-204ENST00000573955 C15orf52Q6ZUT6 534 aaKnown RBP18.34■□□□□ 0.53
USP43-204ENST00000573955 RTFDC1Q9BY42 306 aaPredicted RBP18.34■□□□□ 0.53
USP43-204ENST00000573955 PARP3Q9Y6F1 533 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 ORC4O43929 436 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 MMP1P03956 469 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 IL1R1P14778 569 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 PLCD1P51178 756 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 TFAP4Q01664 338 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 SLC15A2Q16348 729 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 RBM43Q6ZSC3 357 aaKnown RBP18.34■□□□□ 0.53
USP43-204ENST00000573955 OXER1Q8TDS5 423 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 VPS54Q9P1Q0 977 aa18.34■□□□□ 0.53
USP43-204ENST00000573955 V9GY48 417 aaPredicted RBP18.34■□□□□ 0.53
USP43-204ENST00000573955 TROAPQ12815 778 aa18.33■□□□□ 0.53
USP43-204ENST00000573955 SAFBQ15424 915 aaKnown RBP eCLIP18.33■□□□□ 0.53
USP43-204ENST00000573955 SBK1Q52WX2 424 aa18.33■□□□□ 0.53
USP43-204ENST00000573955 C12orf60Q5U649 245 aa18.33■□□□□ 0.53
USP43-204ENST00000573955 FAM200AQ8TCP9 573 aa18.33■□□□□ 0.53
USP43-204ENST00000573955 MKNK2Q9HBH9 465 aa18.33■□□□□ 0.53
USP43-204ENST00000573955 MKRN1Q9UHC7 482 aaKnown RBP18.33■□□□□ 0.53
USP43-204ENST00000573955 BAZ2BQ9UIF8 2168 aaKnown RBP18.33■□□□□ 0.53
USP43-204ENST00000573955 DDX41Q9UJV9 622 aaKnown RBP18.33■□□□□ 0.53
USP43-204ENST00000573955 SRGNP10124 158 aa18.33■□□□□ 0.52
USP43-204ENST00000573955 GTF2A1P52655 376 aaPredicted RBP18.33■□□□□ 0.52
USP43-204ENST00000573955 DOK7Q18PE1 504 aa18.33■□□□□ 0.52
USP43-204ENST00000573955 NOSTRINQ8IVI9 506 aa18.33■□□□□ 0.52
USP43-204ENST00000573955 MXD3Q9BW11 206 aa18.33■□□□□ 0.52
USP43-204ENST00000573955 CBX8Q9HC52 389 aa18.33■□□□□ 0.52
USP43-204ENST00000573955 KLRG2A4D1S0 409 aaPredicted RBP18.32■□□□□ 0.52
USP43-204ENST00000573955 LDHCP07864 332 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 PCP11498 1178 aaKnown RBP18.32■□□□□ 0.52
USP43-204ENST00000573955 FMR1NBQ8N0W7 255 aaPredicted RBP18.32■□□□□ 0.52
USP43-204ENST00000573955 SHISA4Q96DD7 197 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 CLIC6Q96NY7 704 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 SDF4Q9BRK5 362 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 ANKRD31Q8N7Z5 1873 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 KIAA1551Q9HCM1 1747 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 LAMB1P07942 1786 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 USP17L3A6NCW0 530 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 USP17L4A6NCW7 530 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 SLC39A14Q15043 492 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 USP17L1Q7RTZ2 530 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 TEX11Q8IYF3 940 aa18.32■□□□□ 0.52
USP43-204ENST00000573955 RIOK3O14730 519 aaKnown RBP18.31■□□□□ 0.52
USP43-204ENST00000573955 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
USP43-204ENST00000573955 MYCBPQ99417 103 aaPredicted RBP18.31■□□□□ 0.52
USP43-204ENST00000573955 ATP6V0A2Q9Y487 856 aa18.31■□□□□ 0.52
USP43-204ENST00000573955 MORC2Q9Y6X9 1032 aaPredicted RBP18.31■□□□□ 0.52
USP43-204ENST00000573955 BANK1Q8NDB2 785 aa18.31■□□□□ 0.52
USP43-204ENST00000573955 MAP3K14Q99558 947 aa18.31■□□□□ 0.52
USP43-204ENST00000573955 RSPH14Q9UHP6 348 aa18.31■□□□□ 0.52
USP43-204ENST00000573955 A0A1W2PQ27 194 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 A0A1W2PQ64 194 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 A0A1W2PQD8 194 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 CTIFO43310 598 aaKnown RBP18.3■□□□□ 0.52
USP43-204ENST00000573955 PFKFB1P16118 471 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 RCAN1P53805 252 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 PKN1Q16512 942 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 AMOTL1Q8IY63 956 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 CTCFLQ8NI51 663 aaPredicted RBP18.3■□□□□ 0.52
USP43-204ENST00000573955 RNF26Q9BY78 433 aaPredicted RBP18.3■□□□□ 0.52
USP43-204ENST00000573955 FAM205CA6NFA0 338 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 ZNF165P49910 485 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 FUT2Q10981 343 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 PTPAQ15257 358 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 SPECC1Q5M775 1068 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms