RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 SERPINB13Q9UIV8 391 aa14.19□□□□□ -0.14
NDE1-206ENST00000572967 PARP14Q460N5 1801 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 TCRBV5S4A2TA0A5A2 114 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 PEX10O60683 326 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 CDC45O75419 566 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 MBD4O95243 580 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 CHGBP05060 677 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 GSPT1P15170 499 aaKnown RBP14.18□□□□□ -0.14
NDE1-206ENST00000572967 ELNP15502 786 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 FLT3LGP49771 235 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 RAB3GAP1Q15042 981 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 SLAIN1Q8ND83 568 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 RUFY2Q8WXA3 655 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 ARMT1Q9H993 441 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 FRMPD3Q5JV73 1810 aa14.18□□□□□ -0.14
NDE1-206ENST00000572967 USP17L10C9JJH3 530 aa14.17□□□□□ -0.14
NDE1-206ENST00000572967 POLR3DP05423 398 aaPredicted RBP14.17□□□□□ -0.14
NDE1-206ENST00000572967 SDSP20132 328 aa14.17□□□□□ -0.14
NDE1-206ENST00000572967 SHMT1P34896 483 aa14.17□□□□□ -0.14
NDE1-206ENST00000572967 ADD2P35612 726 aa14.17□□□□□ -0.14
NDE1-206ENST00000572967 PLCD1P51178 756 aa14.17□□□□□ -0.14
NDE1-206ENST00000572967 TTC6Q86TZ1 520 aa14.17□□□□□ -0.14
NDE1-206ENST00000572967 MCM9Q9NXL9 1143 aa14.17□□□□□ -0.14
NDE1-206ENST00000572967 BRCA2P51587 3418 aa14.17□□□□□ -0.14
NDE1-206ENST00000572967 ADCY3O60266 1144 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 INHAP05111 366 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 CYP2D6P10635 497 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 CCL5P13501 91 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 GCLCP48506 637 aaPredicted RBP14.16□□□□□ -0.14
NDE1-206ENST00000572967 MFAP1P55081 439 aaKnown RBP14.16□□□□□ -0.14
NDE1-206ENST00000572967 UBXN2AP68543 259 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 ABCB5Q2M3G0 1257 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 CERKLQ49MI3 558 aaPredicted RBP14.16□□□□□ -0.14
NDE1-206ENST00000572967 TATDN1Q6P1N9 297 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 SLC44A5Q8NCS7 719 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 COA7Q96BR5 231 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 DCP1AQ9NPI6 582 aaPredicted RBP14.16□□□□□ -0.14
NDE1-206ENST00000572967 GINM1Q9NU53 330 aa14.16□□□□□ -0.14
NDE1-206ENST00000572967 RAD50Q92878 1312 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 ALPK3Q96L96 1907 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 C19orf81C9J6K1 198 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 MPHOSPH10O00566 681 aaKnown RBP14.15□□□□□ -0.14
NDE1-206ENST00000572967 PRKAB2O43741 272 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 HERVK_113P62684 666 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 USP17L2Q6R6M4 530 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 SKAP1Q86WV1 359 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 PAGR1Q9BTK6 254 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 RNF208Q9H0X6 261 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 UNC93B1Q9H1C4 597 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 TXNRD2Q9NNW7 524 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 EMILIN3Q9NT22 766 aa14.15□□□□□ -0.14
NDE1-206ENST00000572967 GREB1LQ9C091 1923 aaPredicted RBP14.15□□□□□ -0.14
NDE1-206ENST00000572967 COL11A1P12107 1806 aaPredicted RBP14.14□□□□□ -0.15
NDE1-206ENST00000572967 GABPAQ06546 454 aa14.14□□□□□ -0.15
NDE1-206ENST00000572967 UBE3CQ15386 1083 aa14.14□□□□□ -0.15
NDE1-206ENST00000572967 CLEC10AQ8IUN9 316 aa14.14□□□□□ -0.15
NDE1-206ENST00000572967 CABP5Q9NP86 173 aa14.14□□□□□ -0.15
NDE1-206ENST00000572967 RLFQ13129 1914 aa14.13□□□□□ -0.15
NDE1-206ENST00000572967 CYP2D7A0A087X1C5 515 aa14.13□□□□□ -0.15
NDE1-206ENST00000572967 RNF113AO15541 343 aaKnown RBP14.13□□□□□ -0.15
NDE1-206ENST00000572967 VCAM1P19320 739 aa14.13□□□□□ -0.15
NDE1-206ENST00000572967 HOXA7P31268 230 aaPredicted RBP14.13□□□□□ -0.15
NDE1-206ENST00000572967 GUCY1A2P33402 732 aa14.13□□□□□ -0.15
NDE1-206ENST00000572967 SEPT2Q15019 361 aa14.13□□□□□ -0.15
NDE1-206ENST00000572967 ACER1Q8TDN7 264 aa14.13□□□□□ -0.15
NDE1-206ENST00000572967 DYNLL2Q96FJ2 89 aa14.13□□□□□ -0.15
NDE1-206ENST00000572967 C12orf42Q96LP6 360 aa14.13□□□□□ -0.15
NDE1-206ENST00000572967 P2RX7Q99572 595 aaKnown RBP14.13□□□□□ -0.15
NDE1-206ENST00000572967 MORF4L1Q9UBU8 362 aa14.13□□□□□ -0.15
NDE1-206ENST00000572967 MYH4Q9Y623 1939 aa14.12□□□□□ -0.15
NDE1-206ENST00000572967 SMIM22K7EJ46 135 aa14.12□□□□□ -0.15
NDE1-206ENST00000572967 ERVK-9P63128 1117 aa14.12□□□□□ -0.15
NDE1-206ENST00000572967 ERVK-24P63145 666 aa14.12□□□□□ -0.15
NDE1-206ENST00000572967 IRF5Q13568 498 aa14.12□□□□□ -0.15
NDE1-206ENST00000572967 APPBP2Q92624 585 aa14.12□□□□□ -0.15
NDE1-206ENST00000572967 HELLSQ9NRZ9 838 aa14.12□□□□□ -0.15
NDE1-206ENST00000572967 ZNF236Q9UL36 1845 aa14.12□□□□□ -0.15
NDE1-206ENST00000572967 SLC34A2O95436 690 aa14.11□□□□□ -0.15
NDE1-206ENST00000572967 GJB1P08034 283 aa14.11□□□□□ -0.15
NDE1-206ENST00000572967 GJA8P48165 433 aa14.11□□□□□ -0.15
NDE1-206ENST00000572967 USP14P54578 494 aa14.11□□□□□ -0.15
NDE1-206ENST00000572967 NKX2-3Q8TAU0 364 aa14.11□□□□□ -0.15
NDE1-206ENST00000572967 PXYLP1Q8TE99 480 aa14.11□□□□□ -0.15
NDE1-206ENST00000572967 U2AF1L4Q8WU68 220 aaKnown RBP14.11□□□□□ -0.15
NDE1-206ENST00000572967 KIAA1683Q9H0B3 1180 aa14.11□□□□□ -0.15
NDE1-206ENST00000572967 PUS7LQ9H0K6 701 aaKnown RBP14.11□□□□□ -0.15
NDE1-206ENST00000572967 PORCNQ9H237 461 aa14.11□□□□□ -0.15
NDE1-206ENST00000572967 RPAP3Q9H6T3 665 aaPredicted RBP14.11□□□□□ -0.15
NDE1-206ENST00000572967 SLC4A4Q9Y6R1 1079 aa14.11□□□□□ -0.15
NDE1-206ENST00000572967 MKI67P46013 3256 aaKnown RBP14.1□□□□□ -0.15
NDE1-206ENST00000572967 FARP2O94887 1054 aaPredicted RBP14.1□□□□□ -0.15
NDE1-206ENST00000572967 REC8O95072 547 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 HMGCRP04035 888 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 AKR1B1P15121 316 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 CHMLP26374 656 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 TRIM32Q13049 653 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 POTEEQ6S8J3 1075 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 KIAA1211Q6ZU35 1233 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 AMOTL1Q8IY63 956 aa14.1□□□□□ -0.15
NDE1-206ENST00000572967 GPRC5AQ8NFJ5 357 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms