RNA–Protein interactions for RNA: ENST00000572965.1

RPH3AL-209, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 2

Gene RPH3AL, Length 880 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-209ENST00000572965 MS4A4AQ96JQ5 239 aa22.36■■□□□ 1.17
RPH3AL-209ENST00000572965 RBM8AQ9Y5S9 174 aaKnown RBP22.36■■□□□ 1.17
RPH3AL-209ENST00000572965 A0A0G2JLL6 359 aaPredicted RBP22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 TESPA1A2RU30 521 aaPredicted RBP22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 TFAP4Q01664 338 aa22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 MTMR2Q13614 643 aa22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 SHROOM1Q2M3G4 852 aaPredicted RBP22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 RNF20Q5VTR2 975 aa22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 PRRT2Q7Z6L0 340 aaPredicted RBP22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 ESR2Q92731 530 aa22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 LSG1Q9H089 658 aaKnown RBP22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 CNNM2Q9H8M5 875 aa22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.35■■□□□ 1.17
RPH3AL-209ENST00000572965 BACE1P56817 501 aa22.34■■□□□ 1.17
RPH3AL-209ENST00000572965 IFNL1Q8IU54 200 aa22.34■■□□□ 1.17
RPH3AL-209ENST00000572965 NEDD1Q8NHV4 660 aa22.34■■□□□ 1.17
RPH3AL-209ENST00000572965 BRI3BPQ8WY22 251 aa22.34■■□□□ 1.17
RPH3AL-209ENST00000572965 KRT23Q9C075 422 aa22.34■■□□□ 1.17
RPH3AL-209ENST00000572965 LAMA4Q16363 1823 aa22.34■■□□□ 1.17
RPH3AL-209ENST00000572965 FGRP09769 529 aa22.33■■□□□ 1.17
RPH3AL-209ENST00000572965 PABPC4Q13310 644 aaKnown RBP eCLIP22.33■■□□□ 1.17
RPH3AL-209ENST00000572965 FAM47AQ5JRC9 791 aa22.33■■□□□ 1.17
RPH3AL-209ENST00000572965 USP17L2Q6R6M4 530 aa22.33■■□□□ 1.17
RPH3AL-209ENST00000572965 TBC1D10CQ8IV04 446 aa22.33■■□□□ 1.17
RPH3AL-209ENST00000572965 PROCA1Q8NCQ7 364 aaPredicted RBP22.33■■□□□ 1.17
RPH3AL-209ENST00000572965 ZCCHC17Q9NP64 241 aaKnown RBP22.33■■□□□ 1.17
RPH3AL-209ENST00000572965 WBP1LQ9NX94 342 aa22.33■■□□□ 1.17
RPH3AL-209ENST00000572965 GUCY1A2P33402 732 aa22.32■■□□□ 1.16
RPH3AL-209ENST00000572965 HMGCS2P54868 508 aa22.32■■□□□ 1.16
RPH3AL-209ENST00000572965 RALYLQ86SE5 291 aaKnown RBP22.32■■□□□ 1.16
RPH3AL-209ENST00000572965 KIAA1683Q9H0B3 1180 aa22.32■■□□□ 1.16
RPH3AL-209ENST00000572965 PHIPQ8WWQ0 1821 aa22.31■■□□□ 1.16
RPH3AL-209ENST00000572965 PLIN4Q96Q06 1357 aa22.31■■□□□ 1.16
RPH3AL-209ENST00000572965 ZYXQ15942 572 aaKnown RBP22.31■■□□□ 1.16
RPH3AL-209ENST00000572965 SH3D19Q5HYK7 790 aa22.31■■□□□ 1.16
RPH3AL-209ENST00000572965 ANKRD23Q86SG2 305 aa22.31■■□□□ 1.16
RPH3AL-209ENST00000572965 INCENPQ9NQS7 918 aa22.31■■□□□ 1.16
RPH3AL-209ENST00000572965 SAGE1Q9NXZ1 904 aa22.31■■□□□ 1.16
RPH3AL-209ENST00000572965 BTBD19C9JJ37 291 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 TRPA1O75762 1119 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 TTLL1O95922 423 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 CYP21A2P08686 494 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 HSPA1AP0DMV8 641 aaKnown RBP22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 HSPA1BP0DMV9 641 aaKnown RBP22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 EEF2P13639 858 aaKnown RBP22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 CCDC178Q5BJE1 867 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 IQCA1Q86XH1 822 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 GOPCQ9HD26 462 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 NYAP2Q9P242 653 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 PNMA3Q9UL41 463 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 AGTPBP1Q9UPW5 1226 aa22.3■■□□□ 1.16
RPH3AL-209ENST00000572965 CEP350Q5VT06 3117 aa22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 IGF2BP3O00425 579 aaKnown RBP eCLIP22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 ZKSCAN1P17029 563 aaPredicted RBP22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 TAF1CQ15572 869 aaPredicted RBP22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 ACER1Q8TDN7 264 aa22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 CEP95Q96GE4 821 aa22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 NBPF3Q9H094 633 aa22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 RNF186Q9NXI6 227 aa22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 MTMR4Q9NYA4 1195 aa22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 STX8Q9UNK0 236 aa22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 NEDD4P46934 1319 aa22.29■■□□□ 1.16
RPH3AL-209ENST00000572965 B4E1Z4 1266 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 PDHXO00330 501 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 RAD21O60216 631 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 MCCP23508 829 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 CREB3L3Q68CJ9 461 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 CLEC10AQ8IUN9 316 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 FAM43AQ8N2R8 423 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 NCOA7Q8NI08 942 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 PARK7Q99497 189 aaKnown RBP22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 PTPN18Q99952 460 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 ZFYVE28Q9HCC9 887 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 CLIP2Q9UDT6 1046 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 SLC45A1Q9Y2W3 748 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 TMX2Q9Y320 296 aa22.28■■□□□ 1.16
RPH3AL-209ENST00000572965 SLC27A2O14975 620 aa22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 EPB41L2O43491 1005 aaKnown RBP22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 KDM4AO75164 1064 aa22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 OSBPP22059 807 aa22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 LPAR1Q92633 364 aa22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 C12orf42Q96LP6 360 aa22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 UBAC1Q9BSL1 405 aa22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 SYNPO2Q9UMS6 1093 aa22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 PTPRFP10586 1907 aa22.27■■□□□ 1.16
RPH3AL-209ENST00000572965 IGKV6D-41A0A0C4DH26 115 aa22.26■■□□□ 1.15
RPH3AL-209ENST00000572965 E7EWF7 191 aa22.26■■□□□ 1.15
RPH3AL-209ENST00000572965 IRX3P78415 501 aaPredicted RBP22.26■■□□□ 1.15
RPH3AL-209ENST00000572965 NECTIN1Q15223 517 aa22.26■■□□□ 1.15
RPH3AL-209ENST00000572965 VCPKMTQ9H867 229 aa22.26■■□□□ 1.15
RPH3AL-209ENST00000572965 TCP11L1Q9NUJ3 509 aa22.26■■□□□ 1.15
RPH3AL-209ENST00000572965 A0A1W2PRG0 241 aa22.25■■□□□ 1.15
RPH3AL-209ENST00000572965 CTCFP49711 727 aaPredicted RBP22.25■■□□□ 1.15
RPH3AL-209ENST00000572965 KRT32Q14532 448 aa22.25■■□□□ 1.15
RPH3AL-209ENST00000572965 SART3Q15020 963 aaKnown RBP22.25■■□□□ 1.15
RPH3AL-209ENST00000572965 SMCR8Q8TEV9 937 aaPredicted RBP22.25■■□□□ 1.15
RPH3AL-209ENST00000572965 EMILIN3Q9NT22 766 aa22.25■■□□□ 1.15
RPH3AL-209ENST00000572965 TACC3Q9Y6A5 838 aa22.25■■□□□ 1.15
RPH3AL-209ENST00000572965 GREB1LQ9C091 1923 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms