RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CYP46A1Q9Y6A2 500 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 CHD4Q14839 1912 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 SBF1O95248 1867 aa7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 ASTN2O75129 1339 aaPredicted RBP7.77□□□□□ -1.17
CTDNEP1-204ENST00000570484 SRCAPQ6ZRS2 3230 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 MYH2Q9UKX2 1941 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 CNTNAP1P78357 1384 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 MPHOSPH10O00566 681 aaKnown RBP7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 RANBP6O60518 1105 aaKnown RBP7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 PRDM1O75626 825 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 TSPY3P0CV98 308 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 TSPY8P0CW00 308 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 MCM5P33992 734 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 SUPT20HL1Q3ZLR7 823 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 C16orf86Q6ZW13 317 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 LDHDQ86WU2 507 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 IQCA1Q86XH1 822 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 ZNF444Q8N0Y2 327 aaPredicted RBP7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 IL27Q8NEV9 243 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 DYNLL2Q96FJ2 89 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 UPF3BQ9BZI7 483 aaKnown RBP7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 RRAGCQ9HB90 399 aa7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 RBM27Q9P2N5 1060 aaKnown RBP7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 MKRN1Q9UHC7 482 aaKnown RBP7.76□□□□□ -1.17
CTDNEP1-204ENST00000570484 LAMA4Q16363 1823 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 MYO5AQ9Y4I1 1855 aaKnown RBP7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 DDTLA6NHG4 134 aaPredicted RBP7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 B4E1Z4 1266 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 ADM5C9JUS6 153 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 ORC4O43929 436 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 KDM4AO75164 1064 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 CDK8P49336 464 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 PLCD1P51178 756 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 NEK4P51957 841 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 HIRAP54198 1017 aaPredicted RBP7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 ANKRD1Q15327 319 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 TSGA10IPQ3SY00 556 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 POTEEQ6S8J3 1075 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 CDC37L1Q7L3B6 337 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 FOXP4Q8IVH2 680 aaPredicted RBP7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 HSCBQ8IWL3 235 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 SLC44A5Q8NCS7 719 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 KCNB2Q92953 911 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 TM6SF1Q9BZW5 370 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 NBPF3Q9H094 633 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 CABP5Q9NP86 173 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 NMRK2Q9NPI5 230 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 PDRG1Q9NUG6 133 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 DAXXQ9UER7 740 aaPredicted RBP7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 WDR19Q8NEZ3 1342 aa7.75□□□□□ -1.17
CTDNEP1-204ENST00000570484 SCN4AP35499 1836 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 POTEB3A0JP26 581 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 FAM196BA6NMK8 535 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 PRC1O43663 620 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 RPS6KB1P23443 525 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 TTLL12Q14166 644 aaPredicted RBP7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 BECN1Q14457 450 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 ADCK5Q3MIX3 580 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 CCDC178Q5BJE1 867 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 POTEBQ6S5H4 581 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 NFXL1Q6ZNB6 911 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 STOX1Q6ZVD7 989 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 NOL8Q76FK4 1167 aaKnown RBP7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 RUFY3Q7L099 469 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 DHX32Q7L7V1 743 aaKnown RBP7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 ZFPM1Q8IX07 1006 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 MB21D2Q8IYB1 491 aaPredicted RBP7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 ZNF687Q8N1G0 1237 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 CCDC17Q96LX7 622 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 ZNF341Q9BYN7 854 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 NAP1L2Q9ULW6 460 aaPredicted RBP7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 SCAF8Q9UPN6 1271 aaKnown RBP7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 TAF6LQ9Y6J9 622 aa7.74□□□□□ -1.17
CTDNEP1-204ENST00000570484 PLIN4Q96Q06 1357 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 CCDC69A6NI79 296 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 IFIT3O14879 490 aaKnown RBP7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 PPP1R12BO60237 982 aaPredicted RBP7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 HSP90AA1P07900 732 aaKnown RBP7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 RASA1P20936 1047 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 FECHP22830 423 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 YY1P25490 414 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 SHMT1P34896 483 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 IREB2P48200 963 aaKnown RBP7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 MCM2P49736 904 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 EMP3P54852 163 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 TFAP4Q01664 338 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 GABPAQ06546 454 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 MAP2K5Q13163 448 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 WTAPQ15007 396 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 ABCB5Q2M3G0 1257 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 CERKLQ49MI3 558 aaPredicted RBP7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 TMEM67Q5HYA8 995 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 FAM47AQ5JRC9 791 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 SYNE3Q6ZMZ3 975 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 MIGA2Q7L4E1 593 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 SH3BP5LQ7L8J4 393 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 USP48Q86UV5 1035 aa7.73□□□□□ -1.17
CTDNEP1-204ENST00000570484 MARVELD3Q96A59 401 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms