RNA–Protein interactions for RNA: ENST00000570300.1

NPLOC4-203, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-203ENST00000570300 ZFPM1Q8IX07 1006 aa12.82□□□□□ -0.36
NPLOC4-203ENST00000570300 GPC2Q8N158 579 aa12.82□□□□□ -0.36
NPLOC4-203ENST00000570300 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
NPLOC4-203ENST00000570300 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPLOC4-203ENST00000570300 NAP1L2Q9ULW6 460 aaPredicted RBP12.82□□□□□ -0.36
NPLOC4-203ENST00000570300 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 FMNL1O95466 1100 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 GMPSP49915 693 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 FUT2Q10981 343 aa12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 CRACR2BQ8N4Y2 399 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 WASF1Q92558 559 aa12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 RNF26Q9BY78 433 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 ZSCAN16Q9H4T2 348 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 KAT14Q9H8E8 782 aa12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 ORC3Q9UBD5 711 aaPredicted RBP12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 PGAP2Q9UHJ9 254 aa12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 SYNPO2Q9UMS6 1093 aa12.81□□□□□ -0.36
NPLOC4-203ENST00000570300 NMT2O60551 498 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 TOP1P11387 765 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 SMARCA1P28370 1054 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 KIF5BP33176 963 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 CACNB3P54284 484 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 TNFAIP1Q13829 316 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 NBPF11Q86T75 865 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 PNMA1Q8ND90 353 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 FBXO18Q8NFZ0 1043 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 LZTS2Q9BRK4 669 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 MTMR4Q9NYA4 1195 aa12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 RBM27Q9P2N5 1060 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 ZC3H4Q9UPT8 1303 aaKnown RBP12.8□□□□□ -0.36
NPLOC4-203ENST00000570300 GOLGA6L22H0YM25 854 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 TNNI2P48788 182 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 GNAQP50148 359 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 GRM4Q14833 912 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 SLC4A8Q2Y0W8 1093 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 ATL3Q6DD88 541 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 TMTC3Q6ZXV5 915 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 TRIM22Q8IYM9 498 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 CTCFLQ8NI51 663 aaPredicted RBP12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 MKL1Q969V6 931 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 DDX11Q96FC9 970 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 TMEM47Q9BQJ4 181 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 MYL10Q9BUA6 226 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
NPLOC4-203ENST00000570300 PALM3A6NDB9 673 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 PRPF3O43395 683 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 DEXIO95424 95 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 TTLL1O95922 423 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 SNHG28P0DPA3 235 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 AKR1B1P15121 316 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 YBX3P16989 372 aaKnown RBP eCLIP12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 RXRAP19793 462 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 SSRP1Q08945 709 aaKnown RBP12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 TCP10Q12799 353 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 NBPF9Q3BBW0 867 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 CDC37L1Q7L3B6 337 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 ZSCAN29Q8IWY8 852 aaPredicted RBP12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 MICALL2Q8IY33 904 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 TMEM87AQ8NBN3 555 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 CSRNP1Q96S65 589 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 GPRC5DQ9NZD1 345 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 NYAP2Q9P242 653 aa12.78□□□□□ -0.36
NPLOC4-203ENST00000570300 VPS37CA5D8V6 355 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 H3BQV1 296 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 H7C1D1 291 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 RESTQ13127 1097 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 SKOR2Q2VWA4 1001 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 CERKLQ49MI3 558 aaPredicted RBP12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 TMEM179Q6ZVK1 233 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 RAB11FIP4Q86YS3 637 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 NUP133Q8WUM0 1156 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 C8orf76Q96K31 380 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 ANP32EQ9BTT0 268 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 KANSL2Q9H9L4 492 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 GINM1Q9NU53 330 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 STX8Q9UNK0 236 aa12.77□□□□□ -0.37
NPLOC4-203ENST00000570300 CLRN2A0PK11 232 aa12.76□□□□□ -0.37
NPLOC4-203ENST00000570300 TCP10L2B9ZVM9 353 aa12.76□□□□□ -0.37
NPLOC4-203ENST00000570300 CCDC144CPQ8IYA2 1237 aa12.76□□□□□ -0.37
NPLOC4-203ENST00000570300 PHKBQ93100 1093 aa12.76□□□□□ -0.37
NPLOC4-203ENST00000570300 TEPSINQ96N21 525 aa12.76□□□□□ -0.37
NPLOC4-203ENST00000570300 ALG1Q9BT22 464 aa12.76□□□□□ -0.37
NPLOC4-203ENST00000570300 TRIM34Q9BYJ4 488 aa12.76□□□□□ -0.37
NPLOC4-203ENST00000570300 MAD2L2Q9UI95 211 aa12.76□□□□□ -0.37
NPLOC4-203ENST00000570300 GJA3Q9Y6H8 435 aa12.76□□□□□ -0.37
NPLOC4-203ENST00000570300 UTRNP46939 3433 aa12.75□□□□□ -0.37
NPLOC4-203ENST00000570300 SHTN1A0MZ66 631 aa12.75□□□□□ -0.37
NPLOC4-203ENST00000570300 GRIN3BO60391 1043 aa12.75□□□□□ -0.37
NPLOC4-203ENST00000570300 KIF4BQ2VIQ3 1234 aa12.75□□□□□ -0.37
NPLOC4-203ENST00000570300 BRAPQ7Z569 592 aa12.75□□□□□ -0.37
NPLOC4-203ENST00000570300 APOBEC3FQ8IUX4 373 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-203ENST00000570300 SRBD1Q8N5C6 995 aaKnown RBP12.75□□□□□ -0.37
NPLOC4-203ENST00000570300 CNTNAP5Q8WYK1 1306 aa12.75□□□□□ -0.37
NPLOC4-203ENST00000570300 SPZ1Q9BXG8 430 aa12.75□□□□□ -0.37
NPLOC4-203ENST00000570300 SLC26A6Q9BXS9 759 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms