RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 FKBP4Q02790 459 aaKnown RBP eCLIP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 PDE4BQ07343 736 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 CCDC93Q567U6 631 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 BICC1Q9H694 974 aaKnown RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 EPS15L1Q9UBC2 864 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ABCC5O15440 1437 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 SRRM3A6NNA2 597 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 PHEXP78562 749 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ARHGAP4P98171 946 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 POSTNQ15063 836 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ASIC2Q16515 512 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 PPP1R42Q7Z4L9 355 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ZNF280CQ8ND82 737 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 ZNF274Q96GC6 653 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 PFDN4Q9NQP4 134 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 MRGBPQ9NV56 204 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 EPN1Q9Y6I3 576 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 CCT2P78371 535 aaKnown RBP7.85□□□□□ -1.15
CNOT1-216ENST00000569240 TCERG1LQ5VWI1 586 aa7.85□□□□□ -1.15
CNOT1-216ENST00000569240 MAPK13O15264 365 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 MAN1A2O60476 641 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 PRPF6O94906 941 aaKnown RBP7.84□□□□□ -1.15
CNOT1-216ENST00000569240 GSTA5Q7RTV2 222 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 RGS22Q8NE09 1264 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 SERPINI1Q99574 410 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 CUEDC2Q9H467 287 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 EPRSP07814 1512 aaKnown RBP7.84□□□□□ -1.15
CNOT1-216ENST00000569240 SNUPNO95149 360 aaKnown RBP7.84□□□□□ -1.15
CNOT1-216ENST00000569240 DEXIO95424 95 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 SERPINB4P48594 390 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 DNA2P51530 1060 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 CYLC2Q14093 348 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-216ENST00000569240 KRT79Q5XKE5 535 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 NECTIN2Q92692 538 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 SLC26A6Q9BXS9 759 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 AMFRQ9UKV5 643 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.84□□□□□ -1.15
CNOT1-216ENST00000569240 ADGRL1O94910 1474 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 SFSWAPQ12872 951 aaKnown RBP7.84□□□□□ -1.15
CNOT1-216ENST00000569240 ACBD5Q5T8D3 534 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-216ENST00000569240 NECAB1Q8N987 351 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 CFAP61Q8NHU2 1237 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 CACTINQ8WUQ7 758 aaKnown RBP7.84□□□□□ -1.15
CNOT1-216ENST00000569240 CUL5Q93034 780 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 GSDMAQ96QA5 445 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 TMEM60Q9H2L4 133 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 PARVBQ9HBI1 364 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 MTMR6Q9Y217 621 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 MTX1Q13505 466 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 TMCO5AQ8N6Q1 288 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 LRRC8CQ8TDW0 803 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 TXNDC9O14530 226 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 GNA11P29992 359 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 ZNF76P36508 570 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 GUCY1B3Q02153 619 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 C17orf53Q8N3J3 647 aaPredicted RBP7.84□□□□□ -1.15
CNOT1-216ENST00000569240 PASKQ96RG2 1323 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 CUL7Q14999 1698 aa7.84□□□□□ -1.15
CNOT1-216ENST00000569240 LDHCP07864 332 aa7.84□□□□□ -1.16
CNOT1-216ENST00000569240 TATP17735 454 aaPredicted RBP7.84□□□□□ -1.16
CNOT1-216ENST00000569240 OCA2Q04671 838 aa7.84□□□□□ -1.16
CNOT1-216ENST00000569240 ICA1Q05084 483 aa7.84□□□□□ -1.16
CNOT1-216ENST00000569240 KMT5BQ4FZB7 885 aa7.84□□□□□ -1.16
CNOT1-216ENST00000569240 VSTM4Q8IW00 320 aa7.84□□□□□ -1.16
CNOT1-216ENST00000569240 ENOX1Q8TC92 643 aaKnown RBP7.84□□□□□ -1.16
CNOT1-216ENST00000569240 PPP4R1Q8TF05 950 aa7.84□□□□□ -1.16
CNOT1-216ENST00000569240 KCNG1Q9UIX4 513 aa7.84□□□□□ -1.16
CNOT1-216ENST00000569240 PYGBP11216 843 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 CASP14P31944 242 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 KLC1Q07866 573 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 PEX26Q7Z412 305 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 HEATR3Q7Z4Q2 680 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 MFN1Q8IWA4 741 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 PRDM4Q9UKN5 801 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 THAP12O43422 761 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 SLFN14P0C7P3 912 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 SFMBT2Q5VUG0 894 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 CCDC80Q76M96 950 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 PPCSQ9HAB8 311 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 RTEL1Q9NZ71 1219 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 SNX14Q9Y5W7 946 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 TRAPPC8Q9Y2L5 1435 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 GMNCA6NCL1 334 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 CCT6AP40227 531 aaKnown RBP7.83□□□□□ -1.16
CNOT1-216ENST00000569240 IL15P40933 162 aaPredicted RBP7.83□□□□□ -1.16
CNOT1-216ENST00000569240 LRIG3Q6UXM1 1119 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 DTHD1Q6ZMT9 781 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 CRACR2BQ8N4Y2 399 aaPredicted RBP7.83□□□□□ -1.16
CNOT1-216ENST00000569240 HELBQ8NG08 1087 aaPredicted RBP7.83□□□□□ -1.16
CNOT1-216ENST00000569240 GSDMBQ8TAX9 411 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 DHX58Q96C10 678 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 PRAG1Q86YV5 1406 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 SLC5A1P13866 664 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 SNX16P57768 344 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 LIN9Q5TKA1 542 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 AGGF1Q8N302 714 aaeCLIP7.83□□□□□ -1.16
CNOT1-216ENST00000569240 MBIPQ9NS73 344 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 MID2Q9UJV3 735 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 STK38LQ9Y2H1 464 aa7.83□□□□□ -1.16
CNOT1-216ENST00000569240 GRID2IPA4D2P6 1211 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms