RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 RAD17O75943 681 aa20.39■□□□□ 0.86
NEIL1-221ENST00000569035 MMP1P03956 469 aa20.39■□□□□ 0.86
NEIL1-221ENST00000569035 PRELPP51888 382 aa20.39■□□□□ 0.86
NEIL1-221ENST00000569035 DYNLL1P63167 89 aaKnown RBP20.39■□□□□ 0.86
NEIL1-221ENST00000569035 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.39■□□□□ 0.86
NEIL1-221ENST00000569035 NIM1KQ8IY84 436 aa20.39■□□□□ 0.86
NEIL1-221ENST00000569035 MAP3K14Q99558 947 aa20.39■□□□□ 0.86
NEIL1-221ENST00000569035 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.39■□□□□ 0.86
NEIL1-221ENST00000569035 MYH2Q9UKX2 1941 aa20.39■□□□□ 0.85
NEIL1-221ENST00000569035 ELOA2Q8IYF1 753 aaPredicted RBP20.39■□□□□ 0.85
NEIL1-221ENST00000569035 FMR1NBQ8N0W7 255 aaPredicted RBP20.39■□□□□ 0.85
NEIL1-221ENST00000569035 ZNRF3Q9ULT6 936 aa20.39■□□□□ 0.85
NEIL1-221ENST00000569035 COL4A5P29400 1685 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 USP17L12C9JPN9 530 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 USP17L21D6R901 530 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 RANBP6O60518 1105 aaKnown RBP20.38■□□□□ 0.85
NEIL1-221ENST00000569035 ZNF165P49910 485 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 ANO6Q4KMQ2 910 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 NOSTRINQ8IVI9 506 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 CKAP2LQ8IYA6 745 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 FAM177A1Q8N128 213 aaPredicted RBP20.38■□□□□ 0.85
NEIL1-221ENST00000569035 PHKBQ93100 1093 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.38■□□□□ 0.85
NEIL1-221ENST00000569035 AATFQ9NY61 560 aaKnown RBP eCLIP20.38■□□□□ 0.85
NEIL1-221ENST00000569035 TTF2Q9UNY4 1162 aaKnown RBP20.38■□□□□ 0.85
NEIL1-221ENST00000569035 SUGT1Q9Y2Z0 365 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 CLIC4Q9Y696 253 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 LTBP3Q9NS15 1303 aa20.38■□□□□ 0.85
NEIL1-221ENST00000569035 FAM237AA0A1B0GTK4 181 aa20.37■□□□□ 0.85
NEIL1-221ENST00000569035 PRPF3O43395 683 aaKnown RBP20.37■□□□□ 0.85
NEIL1-221ENST00000569035 CUTAO60888 179 aa20.37■□□□□ 0.85
NEIL1-221ENST00000569035 BMP15O95972 392 aa20.37■□□□□ 0.85
NEIL1-221ENST00000569035 JDP2Q8WYK2 163 aa20.37■□□□□ 0.85
NEIL1-221ENST00000569035 SDF4Q9BRK5 362 aa20.37■□□□□ 0.85
NEIL1-221ENST00000569035 BRMS1Q9HCU9 246 aa20.37■□□□□ 0.85
NEIL1-221ENST00000569035 TACC3Q9Y6A5 838 aa20.37■□□□□ 0.85
NEIL1-221ENST00000569035 ROBO3Q96MS0 1386 aa20.37■□□□□ 0.85
NEIL1-221ENST00000569035 GOLGA6L19H0YKK7 550 aa20.36■□□□□ 0.85
NEIL1-221ENST00000569035 YBX3P16989 372 aaKnown RBP eCLIP20.36■□□□□ 0.85
NEIL1-221ENST00000569035 OTUD7BQ6GQQ9 843 aa20.36■□□□□ 0.85
NEIL1-221ENST00000569035 NBPF11Q86T75 865 aa20.36■□□□□ 0.85
NEIL1-221ENST00000569035 RAB11FIP4Q86YS3 637 aa20.36■□□□□ 0.85
NEIL1-221ENST00000569035 KIAA0825Q8IV33 1275 aa20.36■□□□□ 0.85
NEIL1-221ENST00000569035 SENP2Q9HC62 589 aa20.36■□□□□ 0.85
NEIL1-221ENST00000569035 HOOK1Q9UJC3 728 aaKnown RBP20.36■□□□□ 0.85
NEIL1-221ENST00000569035 PSMD14O00487 310 aa20.36■□□□□ 0.85
NEIL1-221ENST00000569035 KIF5BP33176 963 aa20.36■□□□□ 0.85
NEIL1-221ENST00000569035 FKBP1AP62942 108 aaKnown RBP20.36■□□□□ 0.85
NEIL1-221ENST00000569035 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.36■□□□□ 0.85
NEIL1-221ENST00000569035 CEP57L1Q8IYX8 460 aa20.36■□□□□ 0.85
NEIL1-221ENST00000569035 ENAHQ8N8S7 591 aaPredicted RBP20.36■□□□□ 0.85
NEIL1-221ENST00000569035 CTCFLQ8NI51 663 aaPredicted RBP20.36■□□□□ 0.85
NEIL1-221ENST00000569035 KIF28PB7ZC32 967 aa20.35■□□□□ 0.85
NEIL1-221ENST00000569035 RXRAP19793 462 aa20.35■□□□□ 0.85
NEIL1-221ENST00000569035 SCNN1DP51172 638 aa20.35■□□□□ 0.85
NEIL1-221ENST00000569035 DGKHQ86XP1 1220 aa20.35■□□□□ 0.85
NEIL1-221ENST00000569035 NUP133Q8WUM0 1156 aa20.35■□□□□ 0.85
NEIL1-221ENST00000569035 CCDC34Q96HJ3 373 aa20.35■□□□□ 0.85
NEIL1-221ENST00000569035 GOLPH3LQ9H4A5 285 aa20.35■□□□□ 0.85
NEIL1-221ENST00000569035 CBX8Q9HC52 389 aa20.35■□□□□ 0.85
NEIL1-221ENST00000569035 INCENPQ9NQS7 918 aa20.35■□□□□ 0.85
NEIL1-221ENST00000569035 USP5P45974 858 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 GNAQP50148 359 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 CXCL9Q07325 125 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 CCDC144CPQ8IYA2 1237 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 ZKSCAN3Q9BRR0 538 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 MYL10Q9BUA6 226 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 FTOQ9C0B1 505 aaKnown RBP eCLIP20.34■□□□□ 0.85
NEIL1-221ENST00000569035 MROH7-TTC4A0A0A0MT08 1334 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 VIL1P09327 827 aaKnown RBP20.34■□□□□ 0.85
NEIL1-221ENST00000569035 DHX8Q14562 1220 aaKnown RBP20.34■□□□□ 0.85
NEIL1-221ENST00000569035 SARM1Q6SZW1 724 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 ANKS1AQ92625 1134 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 FAM163AQ96GL9 167 aaPredicted RBP20.34■□□□□ 0.85
NEIL1-221ENST00000569035 BPIFA3Q9BQP9 254 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 TCP11L1Q9NUJ3 509 aa20.34■□□□□ 0.85
NEIL1-221ENST00000569035 ZBTB12Q9Y330 459 aaPredicted RBP20.34■□□□□ 0.85
NEIL1-221ENST00000569035 FER1L6Q2WGJ9 1857 aa20.33■□□□□ 0.84
NEIL1-221ENST00000569035 TPM4P67936 248 aa20.33■□□□□ 0.84
NEIL1-221ENST00000569035 AXDND1Q5T1B0 1012 aaPredicted RBP20.33■□□□□ 0.84
NEIL1-221ENST00000569035 RSBN1LQ6PCB5 846 aaPredicted RBP20.33■□□□□ 0.84
NEIL1-221ENST00000569035 DIS3L2Q8IYB7 885 aaKnown RBP20.33■□□□□ 0.84
NEIL1-221ENST00000569035 ZNF579Q8NAF0 562 aaKnown RBP20.33■□□□□ 0.84
NEIL1-221ENST00000569035 NKX2-3Q8TAU0 364 aa20.33■□□□□ 0.84
NEIL1-221ENST00000569035 SCN9AQ15858 1988 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 NAV1Q8NEY1 1877 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 GPR75-ASB3A0A0A6YYF3 556 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 TSPY2A6NKD2 308 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 PPFIA3O75145 1194 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 CDC25BP30305 580 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 BTDP43251 543 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 TROAPQ12815 778 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 PTPAQ15257 358 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 C12orf60Q5U649 245 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 SH3RF3Q8TEJ3 882 aaPredicted RBP20.32■□□□□ 0.84
NEIL1-221ENST00000569035 KIAA1468Q9P260 1216 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 DAGLAQ9Y4D2 1042 aa20.32■□□□□ 0.84
NEIL1-221ENST00000569035 GAKO14976 1311 aa20.31■□□□□ 0.84
NEIL1-221ENST00000569035 BECN2A8MW95 431 aa20.31■□□□□ 0.84
NEIL1-221ENST00000569035 ZNF202O95125 648 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms