RNA–Protein interactions for RNA: ENST00000568936.1

CCNDBP1-214, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 2,088 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-214ENST00000568936 OGFOD1Q8N543 542 aa13.53□□□□□ -0.24
CCNDBP1-214ENST00000568936 CEP95Q96GE4 821 aa13.53□□□□□ -0.24
CCNDBP1-214ENST00000568936 TMEM47Q9BQJ4 181 aa13.53□□□□□ -0.24
CCNDBP1-214ENST00000568936 HDAC9Q9UKV0 1011 aa13.53□□□□□ -0.24
CCNDBP1-214ENST00000568936 SCAF8Q9UPN6 1271 aaKnown RBP13.53□□□□□ -0.24
CCNDBP1-214ENST00000568936 BAZ2BQ9UIF8 2168 aaKnown RBP13.53□□□□□ -0.24
CCNDBP1-214ENST00000568936 IGKV6D-41A0A0C4DH26 115 aa13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 FMNL1O95466 1100 aaPredicted RBP13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 NOVP48745 357 aa13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 ARHGAP27Q6ZUM4 889 aa13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 CRACR2BQ8N4Y2 399 aaPredicted RBP13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 MTMR14Q8NCE2 650 aa13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 SHISA4Q96DD7 197 aa13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 SLC26A6Q9BXS9 759 aa13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 EHD4Q9H223 541 aa13.52□□□□□ -0.24
CCNDBP1-214ENST00000568936 ATRNL1Q5VV63 1379 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 PLIN4Q96Q06 1357 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 H3BQV1 296 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 WNT10BO00744 389 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 ENTPD3O75355 529 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 DDAH1O94760 285 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 YBX3P16989 372 aaKnown RBP eCLIP13.52□□□□□ -0.251e-6■□□□□ 9
CCNDBP1-214ENST00000568936 GMPSP49915 693 aaPredicted RBP13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 RRP1BQ14684 758 aaKnown RBP13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 TNIP1Q15025 636 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 SLC35G1Q2M3R5 365 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 IFFO2Q5TF58 517 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 ZSCAN29Q8IWY8 852 aaPredicted RBP13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 ZNF287Q9HBT7 754 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 STX8Q9UNK0 236 aa13.52□□□□□ -0.25
CCNDBP1-214ENST00000568936 hCG_1642624A0A1W2PR95 340 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 HLA-DOAP06340 250 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 ZNF280AP59817 542 aaPredicted RBP13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 JAG1P78504 1218 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 STAG2Q8N3U4 1231 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 SRBD1Q8N5C6 995 aaKnown RBP13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 FBXO18Q8NFZ0 1043 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 ALG1Q9BT22 464 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 DHX36Q9H2U1 1008 aaKnown RBP13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 KAT14Q9H8E8 782 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 MYOZ2Q9NPC6 264 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 PI4KBQ9UBF8 816 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 TAOK2Q9UL54 1235 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 GJA3Q9Y6H8 435 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 ASTN2O75129 1339 aaPredicted RBP13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 COL2A1P02458 1487 aaPredicted RBP13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 GADD45BO75293 160 aaPredicted RBP13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 CDKL5O76039 1030 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 NT5C2P49902 561 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 SSRP1Q08945 709 aaKnown RBP13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 METTL16Q86W50 562 aaKnown RBP13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 SWAP70Q9UH65 585 aa13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 DDX49Q9Y6V7 483 aaKnown RBP13.51□□□□□ -0.25
CCNDBP1-214ENST00000568936 STK36Q9NRP7 1315 aa13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 KIF28PB7ZC32 967 aa13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 VEGFAP15692 232 aaPredicted RBP13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 EIF6P56537 245 aaKnown RBP13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 PKN1Q16512 942 aa13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 RBM26Q5T8P6 1007 aaKnown RBP13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 TMTC3Q6ZXV5 915 aa13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 SAMD7Q7Z3H4 446 aa13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 MTMR4Q9NYA4 1195 aa13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 PGAP2Q9UHJ9 254 aa13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 MTMR7Q9Y216 660 aa13.5□□□□□ -0.25
CCNDBP1-214ENST00000568936 CALM1P0DP23 149 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 CALM2P0DP24 149 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 CALM3P0DP25 149 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 PDIA4P13667 645 aaKnown RBP13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 TATDN1Q6P1N9 297 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 CPLX2Q6PUV4 134 aaKnown RBP13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 MICALL2Q8IY33 904 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 GPT2Q8TD30 523 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 TMEM39BQ9GZU3 492 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 VEZTQ9HBM0 779 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 TFIP11Q9UBB9 837 aaKnown RBP13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 MAD2L2Q9UI95 211 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 KIF3AQ9Y496 699 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 CNTNAP5Q8WYK1 1306 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 CCDC196A0A1B0GTZ2 297 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 MRE11P49959 708 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 GRM4Q14833 912 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 KRT40Q6A162 431 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 FAM151AQ8WW52 585 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 CNOT7Q9UIV1 285 aaKnown RBP13.49□□□□□ -0.25
CCNDBP1-214ENST00000568936 FIBPO43427 364 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 LMNB1P20700 586 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 RPS12P25398 132 aaKnown RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 PPP2R5BQ15173 497 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 CCDC178Q5BJE1 867 aa13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 FOXP4Q8IVH2 680 aaPredicted RBP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 FTOQ9C0B1 505 aaKnown RBP eCLIP13.48□□□□□ -0.25
CCNDBP1-214ENST00000568936 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms