RNA–Protein interactions for RNA: ENST00000568459.5

PKM-220, Transcript of pyruvate kinase M1/2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PKM, Length 1,806 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-220ENST00000568459 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
PKM-220ENST00000568459 NOL10Q9BSC4 688 aaKnown RBP16.59■□□□□ 0.25
PKM-220ENST00000568459 ARGLU1Q9NWB6 273 aaPredicted RBP16.59■□□□□ 0.25
PKM-220ENST00000568459 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
PKM-220ENST00000568459 A0A1B0GUL7 405 aa16.59■□□□□ 0.25
PKM-220ENST00000568459 CDKL5O76039 1030 aa16.59■□□□□ 0.25
PKM-220ENST00000568459 FANCCQ00597 558 aa16.59■□□□□ 0.25
PKM-220ENST00000568459 CCDC57Q2TAC2 916 aa16.59■□□□□ 0.25
PKM-220ENST00000568459 MICALL2Q8IY33 904 aa16.59■□□□□ 0.25
PKM-220ENST00000568459 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.59■□□□□ 0.25
PKM-220ENST00000568459 VIL1P09327 827 aaKnown RBP16.58■□□□□ 0.24
PKM-220ENST00000568459 PFKFB1P16118 471 aa16.58■□□□□ 0.24
PKM-220ENST00000568459 MYL5Q02045 173 aa16.58■□□□□ 0.24
PKM-220ENST00000568459 TAF7LQ5H9L4 462 aa16.58■□□□□ 0.24
PKM-220ENST00000568459 CCDC158Q5M9N0 1113 aa16.58■□□□□ 0.24
PKM-220ENST00000568459 PODNQ7Z5L7 613 aa16.58■□□□□ 0.24
PKM-220ENST00000568459 APPBP2Q92624 585 aa16.58■□□□□ 0.24
PKM-220ENST00000568459 WTIPA6NIX2 430 aaPredicted RBP16.57■□□□□ 0.24
PKM-220ENST00000568459 M0R2C6 588 aa16.57■□□□□ 0.24
PKM-220ENST00000568459 ZSCAN12O43309 604 aa16.57■□□□□ 0.24
PKM-220ENST00000568459 PRC1O43663 620 aa16.57■□□□□ 0.24
PKM-220ENST00000568459 ZC3H15Q8WU90 426 aaKnown RBP16.57■□□□□ 0.24
PKM-220ENST00000568459 OSBP2Q969R2 916 aa16.57■□□□□ 0.24
PKM-220ENST00000568459 DNAI1Q9UI46 699 aa16.57■□□□□ 0.24
PKM-220ENST00000568459 TRPM7Q96QT4 1865 aa16.57■□□□□ 0.24
PKM-220ENST00000568459 POLR2AP24928 1970 aaKnown RBP16.57■□□□□ 0.24
PKM-220ENST00000568459 PSME4Q14997 1843 aa16.57■□□□□ 0.24
PKM-220ENST00000568459 ZNF804BA4D1E1 1349 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 ZMYM6O95789 1325 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 KLF18A0A0U1RQI7 1052 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 EFCAB8A8MWE9 144 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 CPLX1O14810 134 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 TIMM10P62072 90 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 GUCY1B3Q02153 619 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 CHRNDQ07001 517 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 SYT10Q6XYQ8 523 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 HSD3B7Q9H2F3 369 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 SHTN1A0MZ66 631 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 FOXP2O15409 715 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 ARHGAP6O43182 974 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 SYKP43405 635 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 ZNF446Q9NWS9 450 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 CEP126Q9P2H0 1117 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
PKM-220ENST00000568459 USP17L3A6NCW0 530 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 USP17L4A6NCW7 530 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 GOLGA8BA8MQT2 603 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 ZRANB2O95218 330 aaKnown RBP eCLIP16.55■□□□□ 0.24
PKM-220ENST00000568459 FGAP02671 866 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 HIRAP54198 1017 aaPredicted RBP16.55■□□□□ 0.24
PKM-220ENST00000568459 TRIM65Q6PJ69 517 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 CPLX2Q6PUV4 134 aaKnown RBP16.55■□□□□ 0.24
PKM-220ENST00000568459 USP17L1Q7RTZ2 530 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 SAMD7Q7Z3H4 446 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 RALYLQ86SE5 291 aaKnown RBP16.55■□□□□ 0.24
PKM-220ENST00000568459 VSTM4Q8IW00 320 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 TRPM4Q8TD43 1214 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 ZNF512BQ96KM6 892 aaPredicted RBP16.55■□□□□ 0.24
PKM-220ENST00000568459 COA1Q9GZY4 146 aa16.55■□□□□ 0.24
PKM-220ENST00000568459 MKRN1Q9UHC7 482 aaKnown RBP16.55■□□□□ 0.24
PKM-220ENST00000568459 CUTAO60888 179 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 UBASH3AP57075 661 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 ERCC6LQ2NKX8 1250 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 RBM26Q5T8P6 1007 aaKnown RBP16.54■□□□□ 0.24
PKM-220ENST00000568459 RESP18Q5W5W9 173 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 RSBN1LQ6PCB5 846 aaPredicted RBP16.54■□□□□ 0.24
PKM-220ENST00000568459 LDHAL6AQ6ZMR3 332 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 AGBL3Q8NEM8 1001 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 CNNM1Q9NRU3 951 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
PKM-220ENST00000568459 FHOD1Q9Y613 1164 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 MYH7P12883 1935 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 STK36Q9NRP7 1315 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 POLR3DP05423 398 aaPredicted RBP16.54■□□□□ 0.24
PKM-220ENST00000568459 FOSBP53539 338 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 ANTXR2P58335 489 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 PTPAQ15257 358 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 TBC1D10BQ4KMP7 808 aaPredicted RBP16.54■□□□□ 0.24
PKM-220ENST00000568459 CT47A1Q5JQC4 288 aaPredicted RBP16.54■□□□□ 0.24
PKM-220ENST00000568459 UBXN4Q92575 508 aa16.54■□□□□ 0.24
PKM-220ENST00000568459 ZNF594Q96JF6 807 aaPredicted RBP16.54■□□□□ 0.24
PKM-220ENST00000568459 HOOK1Q9UJC3 728 aaKnown RBP16.54■□□□□ 0.24
PKM-220ENST00000568459 TRAF5O00463 557 aa16.53■□□□□ 0.24
PKM-220ENST00000568459 ZNF213O14771 459 aa16.53■□□□□ 0.24
PKM-220ENST00000568459 CLCN6P51797 869 aa16.53■□□□□ 0.24
PKM-220ENST00000568459 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
PKM-220ENST00000568459 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
PKM-220ENST00000568459 HELBQ8NG08 1087 aaPredicted RBP16.53■□□□□ 0.24
PKM-220ENST00000568459 TMEM87BQ96K49 555 aa16.53■□□□□ 0.24
PKM-220ENST00000568459 CALCOCO1Q9P1Z2 691 aa16.53■□□□□ 0.24
PKM-220ENST00000568459 ANGEL1Q9UNK9 670 aaKnown RBP16.53■□□□□ 0.24
PKM-220ENST00000568459 NID2Q14112 1375 aa16.53■□□□□ 0.24
PKM-220ENST00000568459 A0A087WWV3 80 aa16.52■□□□□ 0.24
PKM-220ENST00000568459 KIF28PB7ZC32 967 aa16.52■□□□□ 0.24
PKM-220ENST00000568459 STX10O60499 249 aa16.52■□□□□ 0.24
PKM-220ENST00000568459 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
PKM-220ENST00000568459 TRDNQ13061 729 aa16.52■□□□□ 0.24
PKM-220ENST00000568459 TTC39AQ5SRH9 613 aa16.52■□□□□ 0.24
PKM-220ENST00000568459 CHST3Q7LGC8 479 aa16.52■□□□□ 0.24
PKM-220ENST00000568459 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms