RNA–Protein interactions for RNA: ENST00000567165.5

LYRM1-207, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-207ENST00000567165 EMILIN3Q9NT22 766 aa13.2□□□□□ -0.3
LYRM1-207ENST00000567165 GINM1Q9NU53 330 aa13.2□□□□□ -0.3
LYRM1-207ENST00000567165 MORF4L1Q9UBU8 362 aa13.2□□□□□ -0.3
LYRM1-207ENST00000567165 SERPINB13Q9UIV8 391 aa13.2□□□□□ -0.3
LYRM1-207ENST00000567165 PLXNB2O15031 1838 aa13.2□□□□□ -0.3
LYRM1-207ENST00000567165 C19orf81C9J6K1 198 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 SHMT1P34896 483 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 HERVK_113P62684 666 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 RAB3GAP1Q15042 981 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 CERKLQ49MI3 558 aaPredicted RBP13.19□□□□□ -0.3
LYRM1-207ENST00000567165 TTC6Q86TZ1 520 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 LCORLQ8N3X6 602 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 NKX2-3Q8TAU0 364 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 PXYLP1Q8TE99 480 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 U2AF1L4Q8WU68 220 aaKnown RBP13.19□□□□□ -0.3
LYRM1-207ENST00000567165 SDR42E1Q8WUS8 393 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 CRNKL1Q9BZJ0 848 aaKnown RBP13.19□□□□□ -0.3
LYRM1-207ENST00000567165 BOLA2Q9H3K6 86 aa13.19□□□□□ -0.3
LYRM1-207ENST00000567165 SMARCA5O60264 1052 aaPredicted RBP13.18□□□□□ -0.3
LYRM1-207ENST00000567165 CHGBP05060 677 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 POLR3DP05423 398 aaPredicted RBP13.18□□□□□ -0.3
LYRM1-207ENST00000567165 CYP2D6P10635 497 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 ABCB5Q2M3G0 1257 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 POTEEQ6S8J3 1075 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 UBE2Q1Q7Z7E8 422 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 ACER1Q8TDN7 264 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 FEZ1Q99689 392 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 CHMP4BQ9H444 224 aaKnown RBP13.18□□□□□ -0.3
LYRM1-207ENST00000567165 PAG1Q9NWQ8 432 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 MCM9Q9NXL9 1143 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 GJD2Q9UKL4 321 aa13.18□□□□□ -0.3
LYRM1-207ENST00000567165 H0YGN5 161 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 MAP3K13O43283 966 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 ATP5JP18859 108 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 GUCY1A2P33402 732 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 GABPAQ06546 454 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 TRIM32Q13049 653 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 PDE3AQ14432 1141 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 PAGR1Q9BTK6 254 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 ARMT1Q9H993 441 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 RBPJLQ9UBG7 517 aa13.17□□□□□ -0.3
LYRM1-207ENST00000567165 MYH7P12883 1935 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 PRKAB2O43741 272 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 FARP2O94887 1054 aaPredicted RBP13.16□□□□□ -0.3
LYRM1-207ENST00000567165 MBD4O95243 580 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 SGPL1O95470 568 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 ADD2P35612 726 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 CLCN6P51797 869 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 ERVK-24P63145 666 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 Q3C1V9 767 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 HABP4Q5JVS0 413 aaKnown RBP13.16□□□□□ -0.3
LYRM1-207ENST00000567165 SLC44A5Q8NCS7 719 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 C12orf42Q96LP6 360 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 DEFB118Q96PH6 123 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 HAUS7Q99871 368 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 LRRCC1Q9C099 1032 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 PORCNQ9H237 461 aa13.16□□□□□ -0.3
LYRM1-207ENST00000567165 DCP1AQ9NPI6 582 aaPredicted RBP13.16□□□□□ -0.3
LYRM1-207ENST00000567165 PAK6Q9NQU5 681 aaPredicted RBP13.16□□□□□ -0.3
LYRM1-207ENST00000567165 BAZ2AQ9UIF9 1905 aaKnown RBP13.15□□□□□ -0.3
LYRM1-207ENST00000567165 TFRCP02786 760 aaKnown RBP13.15□□□□□ -0.3
LYRM1-207ENST00000567165 HMGCRP04035 888 aa13.15□□□□□ -0.3
LYRM1-207ENST00000567165 VCAM1P19320 739 aa13.15□□□□□ -0.3
LYRM1-207ENST00000567165 SEPT2Q15019 361 aa13.15□□□□□ -0.3
LYRM1-207ENST00000567165 TRIB2Q92519 343 aa13.15□□□□□ -0.3
LYRM1-207ENST00000567165 DPF3Q92784 378 aa13.15□□□□□ -0.3
LYRM1-207ENST00000567165 KIAA1683Q9H0B3 1180 aa13.15□□□□□ -0.3
LYRM1-207ENST00000567165 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.15□□□□□ -0.35e-6■□□□□ 8.4
LYRM1-207ENST00000567165 CABP5Q9NP86 173 aa13.15□□□□□ -0.3
LYRM1-207ENST00000567165 USP17L15C9J2P7 530 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L13C9JLJ4 530 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L11C9JVI0 530 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L18D6R9N7 530 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L22D6RA61 530 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L17D6RBQ6 530 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L19D6RCP7 530 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L20D6RJB6 530 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 MPHOSPH10O00566 681 aaKnown RBP13.14□□□□□ -0.31
LYRM1-207ENST00000567165 GALR2O43603 387 aaPredicted RBP13.14□□□□□ -0.31
LYRM1-207ENST00000567165 CNMDO75829 334 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 CYP2B6P20813 491 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 USP14P54578 494 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 USP17L24Q0WX57 530 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 DYNLL2Q96FJ2 89 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.14□□□□□ -0.31
LYRM1-207ENST00000567165 CRISPLD2Q9H0B8 497 aa13.14□□□□□ -0.31
LYRM1-207ENST00000567165 COLQQ9Y215 455 aaPredicted RBP13.14□□□□□ -0.31
LYRM1-207ENST00000567165 MYH8P13535 1937 aa13.13□□□□□ -0.31
LYRM1-207ENST00000567165 CYP2D7A0A087X1C5 515 aa13.13□□□□□ -0.31
LYRM1-207ENST00000567165 A0A1W2PRG0 241 aa13.13□□□□□ -0.31
LYRM1-207ENST00000567165 MAPK4P31152 587 aa13.13□□□□□ -0.31
LYRM1-207ENST00000567165 CATSPERGQ6ZRH7 1159 aa13.13□□□□□ -0.31
LYRM1-207ENST00000567165 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
LYRM1-207ENST00000567165 GTF3C2Q8WUA4 911 aaPredicted RBP13.13□□□□□ -0.31
LYRM1-207ENST00000567165 SOCS4Q8WXH5 440 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms