RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 TRIM28Q13263 835 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 TMC6Q7Z403 805 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 FAM184BQ9ULE4 1060 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 SERPINB2P05120 415 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 CYP19A1P11511 503 aaPredicted RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 PDE6AP16499 860 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 ZSCAN23Q3MJ62 389 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 G2E3Q7L622 706 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 NIM1KQ8IY84 436 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 PARD3BQ8TEW8 1205 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 AZI2Q9H6S1 392 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 CYLC1P35663 651 aaPredicted RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 IRX5P78411 483 aaPredicted RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 C8orf34Q49A92 452 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 PPP4R4Q6NUP7 873 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 MAGEB6Q8N7X4 407 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 RAB3IPQ96QF0 476 aaPredicted RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 MEIS3Q99687 375 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 DENND2AQ9ULE3 1009 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 BRD2P25440 801 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 SNW1Q13573 536 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 GADL1Q6ZQY3 521 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 ZNF830Q96NB3 372 aaPredicted RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 CSRNP2Q9H175 543 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 MCM9Q9NXL9 1143 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.93□□□□□ -1.3
CDH13-209ENST00000567109 MROH5Q6ZUA9 1318 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 TYW5A2RUC4 315 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 PRPF6O94906 941 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 EPB41P11171 864 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 PTGS1P23219 599 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 FBXW4P57775 412 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 SEPT14Q6ZU15 432 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 CCDC110Q8TBZ0 833 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 TRMT1Q9NXH9 659 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 SWAP70Q9UH65 585 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 SAP30BPQ9UHR5 308 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 H7C1W4 665 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 SEMA3EO15041 775 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 N4BP3O15049 544 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 ADCY5O95622 1261 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 KRT2P35908 639 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 KIF11P52732 1056 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 CWF19L2Q2TBE0 894 aaKnown RBP6.93□□□□□ -1.3
CDH13-209ENST00000567109 OTUD7BQ6GQQ9 843 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 CASC4Q6P4E1 433 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 ARHGAP27Q6ZUM4 889 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 NEK11Q8NG66 645 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 ZBTB40Q9NUA8 1239 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 JAG2Q9Y219 1238 aa6.93□□□□□ -1.3
CDH13-209ENST00000567109 AKR1B10O60218 316 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 ATP2B4P23634 1241 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 DMTNQ08495 405 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 ZYXQ15942 572 aaKnown RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 LARGE2Q8N3Y3 721 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 RNF169Q8NCN4 708 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDH13-209ENST00000567109 FAM114A2Q9NRY5 505 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 BCORL1Q5H9F3 1711 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 MARCKSP29966 332 aaPredicted RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 ABI1Q8IZP0 508 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 USH1CQ9Y6N9 552 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 RTL9Q8NET4 1388 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 RIMS1Q86UR5 1692 aaKnown RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 ZNF165P49910 485 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 NUCB1Q02818 461 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 TMCO4Q5TGY1 634 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 NAP1L4Q99733 375 aaKnown RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 LMCD1Q9NZU5 365 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 GGA1Q9UJY5 639 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 ABT1Q9ULW3 272 aaKnown RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 DKC1O60832 514 aaKnown RBP eCLIP6.92□□□□□ -1.3
CDH13-209ENST00000567109 GNA11P29992 359 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 PPP1R2P41236 205 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 SYKP43405 635 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 RPS8P62241 208 aaKnown RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 KRT33BQ14525 404 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 CEP85Q6P2H3 762 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 C1orf228Q6PIY5 440 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 SELENOSQ9BQE4 189 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 KDM2BQ8NHM5 1336 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 CLTCQ00610 1675 aaKnown RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 PSMA7O14818 248 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 BBOX1O75936 387 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 CEP128Q6ZU80 1094 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 TTC14Q96N46 770 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 FEZ2Q9UHY8 353 aaPredicted RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 ARID4AP29374 1257 aaPredicted RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 CLUL1Q15846 466 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 TTC31Q49AM3 519 aaPredicted RBP6.92□□□□□ -1.3
CDH13-209ENST00000567109 TMTC4Q5T4D3 741 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 CCDC102BQ68D86 513 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 TTC30BQ8N4P2 665 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 COPRSQ9NQ92 184 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 ITM2BQ9Y287 266 aa6.92□□□□□ -1.3
CDH13-209ENST00000567109 SMIM23A6NLE4 172 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 P4HA1P13674 534 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 HSPA4P34932 840 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 DTHD1Q6ZMT9 781 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms